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  Chromosome 13 - RH Maps - Single Contig
 

Chromosome 13 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009799 NT_033260 NT_033997 NT_009984 NT_009910 NT_033922 NT_033259 NT_024524
NT_028344 NT_009866 NT_009952 NT_027140 NT_024498


  NT_033997
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033997AL163540270257631          
S/G/Y/R/B/O NT_033997AC025688270363811          
S/G/Y/R/B/O NT_033997AL591024270966892RH483311383.90    1 AL591024
S/G/Y/R/B/O NT_033997AL591024270973642RH758911384.32    1 AL591024
S/G/Y/R/B/O NT_033997AL591024271380632RH1828  13278.00  1 AL591024
S/G/Y/R/B/O NT_033997AL445262271511583          
S/G/Y/R/B/O NT_033997AL356915273132433RH451081385.47    1 AL356915
S/G/Y/R/B/O NT_033997AL356915273437853RH667141384.74    1 AL356915
S/G/Y/R/B/O NT_033997AL356915273447473RH452401385.36    1 AL356915
S/G/Y/R/B/O NT_033997AL356915273447633RH675441385.16    1 AL356915
S/G/Y/R/B/O NT_033997AL356915273657563RH449451385.36    1 AL356915
S/G/Y/R/B/O NT_033997AL138712274041253RH452611385.36    1 AL138712
S/G/Y/R/B/O NT_033997AL138712274042373RH675851385.89    1 AL138712
S/G/Y/R/B/O NT_033997AL138712274084903RH937711385.16    1 AL138712
S/G/Y/R/B/O NT_033997AL138712274293943RH532421384.74  1362.201 AL138712
S/G/Y/R/B/O NT_033997AL138712274294583RH443771385.16    1 AL138712
S/G/Y/R/B/O NT_033997AL138712274295523RH260551385.16    1 AL138712
S/G/Y/R/B/O NT_033997AL138712274347603RH533671386.61  1363.301 AL138712
S/G/Y/R/B/O NT_033997AL138712274349183RH472901378.10    1 AL138712
S/G/Y/R/B/O NT_033997AL138712274355613RH1041531386.09    1 AL138712
S/G/Y/R/B/O NT_033997AL138712274374653RH179241385.68    1 AL138712
S/G/Y/R/B/O NT_033997AL138712274435673RH1044651385.36    1 AL138712
S/G/Y/R/B/O NT_033997AL138712275016813WI-5613    1359.801 AL138712
S/G/Y/R/B/O NT_033997AL138712275200243RH260891385.05    1 AL138712
S/G/Y/R/B/O NT_033997AL138712275221743RH259311386.82    1 AL138712
S/G/Y/R/B/O NT_033997AL138712275222263RH443911383.07    1 AL138712
S/G/Y/R/B/O NT_033997AL139005276010273RH655591386.51    1 AL139005
S/G/Y/R/B/O NT_033997AL139005276104063WI-10847    1355.801 AL139005
S/G/Y/R/B/O NT_033997AL139005276311873RH483111386.82    1 AL139005
S/G/Y/R/B/O NT_033997AL138822277052853RH744121389.75    1 AL138822
S/G/Y/R/B/O NT_033997AL359454277953783RH532991388.0613266.001376.101 AL161895, AL359454, AP002766
S/G/Y/R/B/O NT_033997AL359454278126513RH457261386.82    1 AL161895, AL359454, AP002766
S/G/Y/R/B/O NT_033997AL359454278130833RH448231386.82    1 AL161895, AL359454, AP002766
S/G/Y/R/B/O NT_033997AL359454278130903RH396631391.14    1 AL161895, AL359454, AP002766
S/G/Y/R/B/O NT_033997AL359454278345223RH931981386.82    1 AL161895, AL359454, AP002766
S/G/Y/R/B/O NT_033997AL359454278563783RH712291386.51    1AC025807, AC107307, AC025807, AC107307, AL161895, AL359454, AP002766, U36926, U40053
S/G/Y/R/B/O NT_033997AL359741279778763WI-5634    1368.201AC025688, AC025688, AL359741
S/G/Y/R/B/O NT_033997AL589951280011463          
S/G/Y/R/B/O NT_033997AL592503280547733          
S/G/Y/R/B/O NT_033997AL160255281507433          
S/G/Y/R/B/O NT_033997AL596092283236663          
S/G/Y/R/B/O NT_033997AL607144284755073          
S/G/Y/R/B/O NT_033997AL596114286377593RH533291386.82  1376.101AL353601, AL353601, AL391599, AL596114
S/G/Y/R/B/O NT_033997AL596114286400053RH533121388.1613257.001376.101AL353601, AL353601, AL391599, AL596114
S/G/Y/R/B/O NT_033997AL596114286439903RH532171386.82  1376.101AL353601, AL353601, AL596114, AL603886
S/G/Y/R/B/O NT_033997AL596114286463903RH754491387.41    1AL353601, AL353601, AL596114
S/G/Y/R/B/O NT_033997AL596114286487833RH712851386.82    1AL353601, AL353601, AL596114
S/G/Y/R/B/O NT_033997AL163532287379933          
S/G/Y/R/B/O NT_033997AL158193288987813RH13764  13580.00  1 AL158193
S/G/Y/R/B/O NT_033997AL158193288988913RH98431391.18    1 AL158193


  NT_033997 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033997AL158193288994283RH396651398.60    1 AL158193
S/G/Y/R/B/O NT_033997AL158193289011693RH534361391.14  1376.101 AL158193
S/G/Y/R/B/O NT_033997AL138684289278773          
S/G/Y/R/B/O NT_033997AL139188289840193RH271611387.52    1 AL139188, AL359818
S/G/Y/R/B/O NT_033997AL139188289847383RH805331386.71    1 AL139188, AL359818
S/G/Y/R/B/O NT_033997AL139188290384873RH653341386.82    1 AL139188, AL359818
S/G/Y/R/B/O NT_033997AL354674292695153WI-3007    1374.401 AL354674
S/G/Y/R/B/O NT_033997AL157770293298383WI-4874    1378.201 AL157770, AL162380
S/G/Y/R/B/O NT_033997AL356750293370833RH760771386.71    1 AL162380, AL356750
S/G/Y/R/B/O NT_033997AL356750293371883RH787771386.51    1 AL162380, AL356750
S/G/Y/R/B/O NT_033997AL356750293916033RH533571391.18  1378.301 AC002402, AL162380, AL356750
S/G/Y/R/B/O NT_033997AL161893295151933          
S/G/Y/R/B/O NT_033997AL353648295932473RH750821398.29    1 AL353648
S/G/Y/R/B/O NT_033997AL353648295932663RH913711389.75    1 AL353648
S/G/Y/R/B/O NT_033997AL353648296657093RH426951391.2413578.001378.401 AL353648
S/G/Y/R/B/O NT_033997AL353648296954133RH450671386.71    1 AL353648
S/G/Y/R/B/O NT_033997AL138681297128613RH477861391.18    1 AL138681
S/G/Y/R/B/O NT_033997AL138681297933233RH396871386.82    1 AL138681
S/G/Y/R/B/O NT_033997AL138681297933273RH14144  13588.00  1 AL138681
S/G/Y/R/B/O NT_033997AL138681297935903RH533391388.16  1380.201 AL138681
S/G/Y/R/B/O NT_033997AL138681298259263D13S289    1380.101 AL138681
S/G/Y/R/B/O NT_033997AL138681298259263RH588  13583.00  1 AL138681
S/G/Y/R/B/O NT_033997AL512642298983723RH704511388.34    1 AL512642
S/G/Y/R/B/O NT_033997AL353601299725191          
S/G/Y/R/B/O NT_033997 - RH249711386.30    1AL137142, AL137142
S/G/Y/R/B/O NT_033997 - RH74706  13337.00  1AL138699, AL138699
S/G/Y/R/B/O NT_033997 - RH444591385.99    0  
S/G/Y/R/B/O NT_033997 - RH452771387.10    0  
S/G/Y/R/B/O NT_033997 - RH486181386.30    1AL138965, AC046137, AL138965
S/G/Y/R/B/O NT_033997 - RH534161386.20    1AL137142, AL137142
S/G/Y/R/B/O NT_033997 - RH684491386.30    1AL138965, AC046137, AL138965
S/G/Y/R/B/O NT_033997 - RH806511386.30    1AL137142, AL137142
S/G/Y/R/B/O NT_033997 - RH915631386.30    1AL138965, AC046137, AL138965
S/G/Y/R/B/O NT_033997 - RH921321386.30    1AL138965, AC046137, AL138965