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  Chromosome 8 - RH Maps - Single Contig
 

Chromosome 8 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_008060 NT_023779 NT_023744 NT_008227 NT_023736 NT_019483 NT_008010 NT_008161
NT_015280 NT_030737 NT_023704 NT_008205 NT_008300 NT_023666 NT_033187 NT_033199
NT_007988 NT_007993 NT_030743 NT_033201 NT_007995 NT_026349 NT_033197 NT_008251
NT_008045 NT_008176 NT_017505 NT_008216 NT_023678 NT_023878 NT_017431 NT_023806
NT_023679 NT_008201 NT_023727 NT_033189 NT_023795 NT_008014 NT_008101 NT_008050
NT_008231 NT_008026 NT_023673 NT_029343 NT_033186 NT_008218 NT_023672 NT_030735
NT_023660 NT_008183 NT_008166 NT_023676 NT_023821 NT_023732 NT_008209 NT_008055
NT_008186 NT_008292 NT_007972 NT_023682 NT_008117 NT_023717 NT_008007 NT_023693
NT_008059 NT_008046 NT_008144 NT_033198 NT_008048 NT_033200 NT_023670 NT_008289
NT_023742 NT_023811 NT_031821 NT_023705 NT_023663 NT_033191 NT_033195 NT_008157
NT_023726 NT_033196 NT_008023 NT_023715 NT_030744 NT_023709 NT_030741 NT_008150
NT_025796 NT_007994 NT_028251 NT_023662 NT_033193 NT_023838 NT_008104 NT_033185
NT_027068 NT_030032 NT_033192 NT_008127 NT_033194 NT_023747 NT_023684 NT_031818


  NT_030737
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_030737AC073490161327321          
S/G/Y/R/B/O NT_030737AC025648161340501          
S/G/Y/R/B/O NT_030737AC105058161464643          
S/G/Y/R/B/O NT_030737AC091162162687862          
S/G/Y/R/B/O NT_030737AC011586164673862RH62253856.26  859.601 AC011586, AC069388, AC087202
S/G/Y/R/B/O NT_030737AC011586165302172AFM177XB10    859.601 AC011586
S/G/Y/R/B/O NT_030737AC068992165844423          
S/G/Y/R/B/O NT_030737AC025218167206793          
S/G/Y/R/B/O NT_030737AB020858168334283          
S/G/Y/R/B/O NT_030737AB020859169334283          
S/G/Y/R/B/O NT_030737AB020860170550223RH103479859.41    1 AC091050
S/G/Y/R/B/O NT_030737AB020860170678903RH36493846.17    1 AB020860, AC091050
S/G/Y/R/B/O NT_030737AB020860170725963RH11887850.80    1 AB020860, AC091050
S/G/Y/R/B/O NT_030737AB020860170768543RH8073  8913.00  1 AB020860, AC091050
S/G/Y/R/B/O NT_030737AB020860170779533RH9809846.17    1 AB020860, AC091050
S/G/Y/R/B/O NT_030737AB020861171340273RH67242867.29    1 AB020861
S/G/Y/R/B/O NT_030737AB020861171429573RH40489867.29    1 AB020861
S/G/Y/R/B/O NT_030737AB020861171453533RH2701210482.20    1 AB020861
S/G/Y/R/B/O NT_030737AB020861171492973RH36947858.50    1 AB020861
S/G/Y/R/B/O NT_030737AB020862172334283          
S/G/Y/R/B/O NT_030737AB020863173976503RH79723863.84    1 AB020863, AC016117, AC079187, AC084079
S/G/Y/R/B/O NT_030737AB020863174159333RH75453863.55    1 AB020863, AC016117, AC079187, AC084079
S/G/Y/R/B/O NT_030737AB020863174173903RH41931865.20    1 AB020863, AC016117, AC079187, AC084079
S/G/Y/R/B/O NT_030737AB020863174174443RH38030  8884.00  1 AB020863, AC016117, AC079187, AC084079
S/G/Y/R/B/O NT_030737AB020863174174673RH103268858.90    1 AB020863, AC016117, AC079187, AC084079
S/G/Y/R/B/O NT_030737AB020863174175373RH80694863.62    1 AB020863, AC016117, AC079187, AC084079
S/G/Y/R/B/O NT_030737AB020863174900203RH62492860.348918.00862.901 AB020863, AF165145
S/G/Y/R/B/O NT_030737AB020864174911983RH12837868.05    1 AB020864, AF165145
S/G/Y/R/B/O NT_030737AB020864174912003RH10339867.29    1 AB020864, AF165145
S/G/Y/R/B/O NT_030737AB020864174922743RH42806  8916.00  1 AB020864, AF165145
S/G/Y/R/B/O NT_030737AB020864175133323RH62145868.70  869.301 AB020864, AF165145, AF267167
S/G/Y/R/B/O NT_030737AB020864175147233RH26999865.81    1 AB020864, AF165145, AF267167
S/G/Y/R/B/O NT_030737AB020864175192423RH40588871.52    1 AB020864, AF165145, AF267167
S/G/Y/R/B/O NT_030737AB020865175903373          
S/G/Y/R/B/O NT_030737AB020866176995533RH62025861.20  862.901 AB020866, AC026854, AC087273
S/G/Y/R/B/O NT_030737AB020866176995533RH62609870.47  871.301 AB020866, AC026854, AC087273
S/G/Y/R/B/O NT_030737AB020866176996153RH11590867.40    1 AB020866, AC026854, AC087273
S/G/Y/R/B/O NT_030737AB020866177207553RH62608862.588877.00864.801 AB020866, AC026854, AC034166, AC087273, AC087625
S/G/Y/R/B/O NT_030737AB020866177233863RH75767862.68    1 AB020866, AC026854, AC034166, AC087273, AC087625
S/G/Y/R/B/O NT_030737AB020866177863073RH45791861.42    1 AB020866, AC034166, AC087625
S/G/Y/R/B/O NT_030737AB020867177983153RH38160  8909.00  1 AB020867, AC034166, AC087625
S/G/Y/R/B/O NT_030737AB020867177994053RH15096874.56    1 AB020867
S/G/Y/R/B/O NT_030737AB020867178197513RH62373866.58  867.901 AC034166, AC087625
S/G/Y/R/B/O NT_030737AB020867178587823RH62589870.47  871.301 AC034166, AC087625
S/G/Y/R/B/O NT_030737AB020867178871833RH40579877.08    1 AB020867, AC034166, AC087625, AF220175
S/G/Y/R/B/O NT_030737AB020867178879753RH7957  8909.00  1 AB020867, AC034166, AC087625, AF220175
S/G/Y/R/B/O NT_030737AB020868178944353RH94375867.23    1 AB020868, AC034166, AC087625, AF220175
S/G/Y/R/B/O NT_030737AB020868178974763RH11700870.47    1 AB020868, AC034166, AC087625, AF220175
S/G/Y/R/B/O NT_030737AC025062180533732RH75822864.05    1 AC025062
S/G/Y/R/B/O NT_030737AC025062180533762RH70671870.47    1 AC025062


  NT_030737 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_030737AC025062180534602RH40594864.82    1 AC025062
S/G/Y/R/B/O NT_030737AC025062182312362RH11442874.46    1AC025648, AC025062, AC025648, D10870, D10871, D10872
S/G/Y/R/B/O NT_030737AC090148183442101RH47419865.26    1AC024238, AC025648, AC024238, AC025648, AC090148
S/G/Y/R/B/O NT_030737AC090148183442591RH17032879.27    1AC025648, AC025648, AC090148
S/G/Y/R/B/O NT_030737AC090148183474821RH40541879.27    1AC024238, AC025648, AC024238, AC025648, AC090148
S/G/Y/R/B/O NT_030737AC090148183491811RH80712865.70    1AC024238, AC025648, AC024238, AC025648, AC090148
S/G/Y/R/B/O NT_030737AC024238183084611CHLC.GATA72C10    873.701AC025648, AC090148, AC024238, AC025648, AC090148
S/G/Y/R/B/O NT_030737AC100800185177113RH35906878.96    1AC090420, AC083848, AC090105, AC090420, AC100800
S/G/Y/R/B/O NT_030737AC090420186111423RH98309879.69    1AC024929, AC087821, AC024037, AC024929, AC087821, AC090420
S/G/Y/R/B/O NT_030737AC090420186111423RH74561  8914.00  1AC024929, AC087821, AC024037, AC024929, AC087821, AC090420
S/G/Y/R/B/O NT_030737AC087821186352243          
S/G/Y/R/B/O NT_030737AC009884187477173          
S/G/Y/R/B/O NT_030737AC027634188686811          
S/G/Y/R/B/O NT_030737AC024929189162001          
S/G/Y/R/B/O NT_030737AC060813189847641WI-5962    877.501AC027634, AC027634, AC060813
S/G/Y/R/B/O NT_030737AC068880191931073RH62235863.94    1 AC068880
S/G/Y/R/B/O NT_030737AC068880191931073WI-17568    887.701 AC068880
S/G/Y/R/B/O NT_030737AC068880192088593WI-15862    887.701 AC068880
S/G/Y/R/B/O NT_030737AC068880192284213RH14215  8945.00  2AC090786, AC068880, AC090786
S/G/Y/R/B/O NT_030737AC068880192293213RH62433864.10    2AC090786, AC068880, AC090786
S/G/Y/R/B/O NT_030737AC068880192293213WI-17471    888.002AC090786, AC068880, AC090786
S/G/Y/R/B/O NT_030737AC068880192295163RH32947  8961.00  2AC090786, AC068880, AC090786
S/G/Y/R/B/O NT_030737 - RH16175862.79    0  
S/G/Y/R/B/O NT_030737 - RH27014859.41    1AL500527, AL356597, AL500527
S/G/Y/R/B/O NT_030737 - RH36522864.82    1AC015465, AC015465, AC074252
S/G/Y/R/B/O NT_030737 - RH62220863.51    1AC023288, AC087819, AC091171, AC105206, AC023288, AC087819, AC091171, AC105206
S/G/Y/R/B/O NT_030737 - RH62376860.98    1AC024993, AF271406, AC024993, AF271406
S/G/Y/R/B/O NT_030737 - RH62387861.82    1AC025853, AC025853