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  Chromosome 8 - RH Maps - Single Contig
 

Chromosome 8 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_008060 NT_023779 NT_023744 NT_008227 NT_023736 NT_019483 NT_008010 NT_008161
NT_015280 NT_030737 NT_023704 NT_008205 NT_008300 NT_023666 NT_033187 NT_033199
NT_007988 NT_007993 NT_030743 NT_033201 NT_007995 NT_026349 NT_033197 NT_008251
NT_008045 NT_008176 NT_017505 NT_008216 NT_023678 NT_023878 NT_017431 NT_023806
NT_023679 NT_008201 NT_023727 NT_033189 NT_023795 NT_008014 NT_008101 NT_008050
NT_008231 NT_008026 NT_023673 NT_029343 NT_033186 NT_008218 NT_023672 NT_030735
NT_023660 NT_008183 NT_008166 NT_023676 NT_023821 NT_023732 NT_008209 NT_008055
NT_008186 NT_008292 NT_007972 NT_023682 NT_008117 NT_023717 NT_008007 NT_023693
NT_008059 NT_008046 NT_008144 NT_033198 NT_008048 NT_033200 NT_023670 NT_008289
NT_023742 NT_023811 NT_031821 NT_023705 NT_023663 NT_033191 NT_033195 NT_008157
NT_023726 NT_033196 NT_008023 NT_023715 NT_030744 NT_023709 NT_030741 NT_008150
NT_025796 NT_007994 NT_028251 NT_023662 NT_033193 NT_023838 NT_008104 NT_033185
NT_027068 NT_030032 NT_033192 NT_008127 NT_033194 NT_023747 NT_023684 NT_031818


  NT_007993
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007993AF252825283057071          
S/G/Y/R/B/O NT_007993AC109329283116892          
S/G/Y/R/B/O NT_007993AC011204283480232RH7840  81474.00  1AC109329, AF252825, AC011204, AC109329, AF165140, AF252825
S/G/Y/R/B/O NT_007993AC011204283480932RH405218118.60    1AF252825, AC011204, AF252825
S/G/Y/R/B/O NT_007993AC011204283493272RH626038118.6081425.008121.401AC109329, AF252825, AC109329, AF165140, AF252825
S/G/Y/R/B/O NT_007993AC011204284023962RH455438118.50    1 AC011204, AF165140
S/G/Y/R/B/O NT_007993AC011204284492752RH622738118.5081483.008122.001AC102945, AC011204, AC102945, AF165140, AF252826
S/G/Y/R/B/O NT_007993AC102945284778593RH689048118.50    1 AC102945, AF252826
S/G/Y/R/B/O NT_007993AC102945284937503RH1034648118.50    1 AC102945, AF252826
S/G/Y/R/B/O NT_007993AC102945285090863RH625388118.50  8121.901 AC102945, AF252826
S/G/Y/R/B/O NT_007993AC102945285090923RH13913  81480.00  1 AC102945, AF252826
S/G/Y/R/B/O NT_007993AC102945285092223RH114638118.60    1 AC102945, AF252826
S/G/Y/R/B/O NT_007993AC102945285150213RH930008118.60    1AC103959, AF215848, AC102945, AC103959, AF215848, AF252826
S/G/Y/R/B/O NT_007993AF215848285764501RH1038198118.50    1AC103959, AC103959, AF215848
S/G/Y/R/B/O NT_007993AF215848285808161RH477748118.50    1AC103959, AC103959, AF215848
S/G/Y/R/B/O NT_007993AC103959285815031          
S/G/Y/R/B/O NT_007993AC090197286659091RH406178102.30    1AF279339, AC090197, AF279339
S/G/Y/R/B/O NT_007993AC090197287024011RH75939899.08    1AF279339, AC090197, AF279339
S/G/Y/R/B/O NT_007993AF279339286920231          
S/G/Y/R/B/O NT_007993AF191252287744911          
S/G/Y/R/B/O NT_007993AC104561299701261RH622268103.3481123.008102.101 AC104561
S/G/Y/R/B/O NT_007993AC104561299939931RH40510895.20    1AF191252, AC104561, AF191252
S/G/Y/R/B/O NT_007993AC104561300221241RH623638102.79  8102.101AF216674, AC104561, AF216674
S/G/Y/R/B/O NT_007993AC104561300309801RH42835  81127.00  1AF191252, AF216674, AC104561, AF191252, AF216674
S/G/Y/R/B/O NT_007993AC104561300354651RH62523899.72  8104.501AF191252, AF216674, AC104561, AF191252, AF216674
S/G/Y/R/B/O NT_007993AC090820290090442RH678868118.60    1AC026979, AC026979, AC090820
S/G/Y/R/B/O NT_007993AC026979290202351RH621318118.50  8121.401 AC026979
S/G/Y/R/B/O NT_007993AC026979306442991RH620358116.67  8119.701AC044849, AC026979, AC044849
S/G/Y/R/B/O NT_007993AC026979306442991RH1994  81441.00  1AC044849, AC026979, AC044849
S/G/Y/R/B/O NT_007993AC026979306443051WI-20351    8117.501AC044849, AC026979, AC044849
S/G/Y/R/B/O NT_007993AC026979306443051RH621718105.18    1AC044849, AC026979, AC044849
S/G/Y/R/B/O NT_007993AC026979306443411RH623568116.67  8119.701AC044849, AC026979, AC044849
S/G/Y/R/B/O NT_007993AC026979306443511RH173308117.74    1AC044849, AC026979, AC044849
S/G/Y/R/B/O NT_007993AC026979306444601RH471658116.67    1AC044849, AC026979, AC044849
S/G/Y/R/B/O NT_007993AC026979306450921RH756428115.52    1AC044849, AC026979, AC044849
S/G/Y/R/B/O NT_007993AC044849306463071RH8120  81464.00  1 AC044849
S/G/Y/R/B/O NT_007993AC044849306885011RH767098116.93    1 AC044849
S/G/Y/R/B/O NT_007993AC044849306886081RH665518116.67    1 AC044849
S/G/Y/R/B/O NT_007993AC044849306889001WI-20115    8117.701 AC044849
S/G/Y/R/B/O NT_007993AC044849306889001RH626048105.60    1 AC044849
S/G/Y/R/B/O NT_007993AC044849306890351RH14232  81461.00  1 AC044849
S/G/Y/R/B/O NT_007993AC009314291002673RH624308118.50  8122.201 AF228703
S/G/Y/R/B/O NT_007993AC009314291008513RH624208117.53  8122.201AC103959, AF215848, AC009314, AC087624, AC103959, AF215848
S/G/Y/R/B/O NT_007993AC009314291201553RH625018118.50  8122.201AC103959, AF215848, AC009314, AC087624, AC103959, AF215848, AF228703
S/G/Y/R/B/O NT_007993AC009314291202053RH171538118.60    1AC103959, AF215848, AC009314, AC087624, AC103959, AF215848, AF228703
S/G/Y/R/B/O NT_007993AC009314291213183RH266768118.50    1AC103959, AC009314, AC087624, AC103959, AF228703
S/G/Y/R/B/O NT_007993AC009314291640123WI-3666    8122.501AC103959, AF215848, AC009314, AC087624, AC103959, AF215848
S/G/Y/R/B/O NT_007993AC009314291889403RH677508118.60    1AC103959, AF215848, AC009314, AC087624, AC103959, AF215848
S/G/Y/R/B/O NT_007993AC009314291889483RH405088118.50    1AC103959, AF215848, AC009314, AC087624, AC103959, AF215848
S/G/Y/R/B/O NT_007993AC009314292078603RH167588118.60    1AC103959, AF215848, AC009314, AC084087, AC087624, AC103959, AF215848, M60484


  NT_007993 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007993AC009314292180183RH462798117.53    1 AC009314, AC084087, AC087624
S/G/Y/R/B/O NT_007993AC009314292180583RH405728118.60    1 AC009314, AC084087, AC087624
S/G/Y/R/B/O NT_007993AC008066293496413AFMA224WH5    8123.701 AC008066, AC090281, AF212833
S/G/Y/R/B/O NT_007993AC008066294279663RH14774  81481.008123.601AC084736, AC008066, AC084736
S/G/Y/R/B/O NT_007993AC008066294279663RH625368120.01    1AC084736, AC008066, AC084736
S/G/Y/R/B/O NT_007993AC084736294910263WI-17945    8123.701 AC084736, AF181896
S/G/Y/R/B/O NT_007993AC084736294910263RH624368119.79    1 AC084736, AF181896
S/G/Y/R/B/O NT_007993AF181897295952113RH38187  9611.00  1AC009563, AC009563, AF181897, L76937
S/G/Y/R/B/O NT_007993AF181897295979183RH405388120.22    1AC009563, AC009563, AF181897
S/G/Y/R/B/O NT_007993AC009563296291281          
S/G/Y/R/B/O NT_007993AC104044297031792RH31053  81519.00  1 AC104044
S/G/Y/R/B/O NT_007993AC068672297224332          
S/G/Y/R/B/O NT_007993AC090816299021831          
S/G/Y/R/B/O NT_007993AF216674300454141          
S/G/Y/R/B/O NT_007993AC051642300725871RH80596898.87    1AC022597, AF216674, AC022597, AC051642, AF216674
S/G/Y/R/B/O NT_007993AC051642300787801RH17264897.63    1AC022597, AF216674, AC022597, AC051642, AF216674
S/G/Y/R/B/O NT_007993AC051642300788001RH128808102.25    1AC022597, AF216674, AC022597, AC051642, AF216674
S/G/Y/R/B/O NT_007993AC051642300884471RH104237899.29    1AC022597, AF216674, AC022597, AC051642, AF216674
S/G/Y/R/B/O NT_007993AC051642300923221RH16282898.55    1AC022597, AF216674, AC022597, AC051642, AF216674
S/G/Y/R/B/O NT_007993AC051642301060751RH624508101.8281114.008102.101AC022597, AF216674, AC022597, AC051642, AF216674
S/G/Y/R/B/O NT_007993AC051642301062111RH16405898.26    1AC022597, AF216674, AC022597, AC051642, AF216674
S/G/Y/R/B/O NT_007993AC051642301074651RH13816  81114.00  1AF216674, AC051642, AF216674
S/G/Y/R/B/O NT_007993AC051642301077081RH165058102.79    1AC022597, AF216674, AC022597, AC051642, AF216674
S/G/Y/R/B/O NT_007993AC051642301088271RH16493898.58    1AC022597, AF216674, AC022597, AC051642, AF216674
S/G/Y/R/B/O NT_007993AC051642301123681RH62353898.7781114.008103.301AC022597, AC022597, AC051642
S/G/Y/R/B/O NT_007993AC051642301125811RH625948103.34  8102.101AC022597, AC022597, AC051642
S/G/Y/R/B/O NT_007993AC051642301128551RH62491893.08  8103.301AC022597, AF216674, AC022597, AC051642, AF216674
S/G/Y/R/B/O NT_007993AC051642301133031RH404978100.31    1AC022597, AF216674, AC022597, AC051642, AF216674
S/G/Y/R/B/O NT_007993AC051642301161701RH405998100.53    1AC022597, AF216674, AC022597, AC051642, AF216674
S/G/Y/R/B/O NT_007993AC051642301486101WI-961    8102.101AC022597, AC022597, AC051642
S/G/Y/R/B/O NT_007993AC022597301754901          
S/G/Y/R/B/O NT_007993AC012574302201353RH94244898.55    1AC022597, AC051642, AC012574, AC022597, AC051642
S/G/Y/R/B/O NT_007993AC012574302502123RH62275899.29  8104.501AC022597, AC012574, AC022597
S/G/Y/R/B/O NT_007993AC012119303828893RH621948102.79  8102.101 AC012119, AF242179
S/G/Y/R/B/O NT_007993AC012119303830303RH18022897.73    1 AC012119, AF242179
S/G/Y/R/B/O NT_007993AC012119303844983RH714098102.79    1 AC012119, AF242179
S/G/Y/R/B/O NT_007993AC012119303947493RH705078100.31    1 AC012119, AF098463, AF242179
S/G/Y/R/B/O NT_007993AC091194304161092          
S/G/Y/R/B/O NT_007993AC044895304467541          
S/G/Y/R/B/O NT_007993AC023202309558961RH456068104.20    1 AC023202
S/G/Y/R/B/O NT_007993AC091165309065523WI-4029    8118.001AC108926, AC017065, AC091165, AC108926
S/G/Y/R/B/O NT_007993AC108926309109933          
S/G/Y/R/B/O NT_007993AC044891310175133          
S/G/Y/R/B/O NT_007993AC083759311601121          
S/G/Y/R/B/O NT_007993 - RH361028116.99    0  
S/G/Y/R/B/O NT_007993 - RH13761  81458.00  0AC026979, AC044849, AC026979, AC044849
S/G/Y/R/B/O NT_007993 - TIGR-A004W39    8117.501AC020588, AC024678, AC055851, AC084262, AC020588, AC024678, AC055851, AC084262
S/G/Y/R/B/O NT_007993 - RH405898116.78    0  
S/G/Y/R/B/O NT_007993 - RH33040  81418.00  1AC084026, AC084026
S/G/Y/R/B/O NT_007993 - RH463448116.89    0  


  NT_007993 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007993 - RH37907  81395.00  1AC020588, AC084262, AC020588, AC084262
S/G/Y/R/B/O NT_007993 - RH487928116.78    0  
S/G/Y/R/B/O NT_007993 - RH42838  81391.00  1AC020588, AC020588
S/G/Y/R/B/O NT_007993 - RH622228116.99  8117.700  
S/G/Y/R/B/O NT_007993 - RH712778118.50    0