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  Chromosome 8 - RH Maps - Single Contig
 

Chromosome 8 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_008060 NT_023779 NT_023744 NT_008227 NT_023736 NT_019483 NT_008010 NT_008161
NT_015280 NT_030737 NT_023704 NT_008205 NT_008300 NT_023666 NT_033187 NT_033199
NT_007988 NT_007993 NT_030743 NT_033201 NT_007995 NT_026349 NT_033197 NT_008251
NT_008045 NT_008176 NT_017505 NT_008216 NT_023678 NT_023878 NT_017431 NT_023806
NT_023679 NT_008201 NT_023727 NT_033189 NT_023795 NT_008014 NT_008101 NT_008050
NT_008231 NT_008026 NT_023673 NT_029343 NT_033186 NT_008218 NT_023672 NT_030735
NT_023660 NT_008183 NT_008166 NT_023676 NT_023821 NT_023732 NT_008209 NT_008055
NT_008186 NT_008292 NT_007972 NT_023682 NT_008117 NT_023717 NT_008007 NT_023693
NT_008059 NT_008046 NT_008144 NT_033198 NT_008048 NT_033200 NT_023670 NT_008289
NT_023742 NT_023811 NT_031821 NT_023705 NT_023663 NT_033191 NT_033195 NT_008157
NT_023726 NT_033196 NT_008023 NT_023715 NT_030744 NT_023709 NT_030741 NT_008150
NT_025796 NT_007994 NT_028251 NT_023662 NT_033193 NT_023838 NT_008104 NT_033185
NT_027068 NT_030032 NT_033192 NT_008127 NT_033194 NT_023747 NT_023684 NT_031818


  NT_023811
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023811AC1042571172438522          
S/G/Y/R/B/O NT_023811AC0648021173400212          
S/G/Y/R/B/O NT_023811AC0258811175211003          
S/G/Y/R/B/O NT_023811AC0164941177022993WI-4655    8604.201 AC016494, AC067982
S/G/Y/R/B/O NT_023811AC0258281177273912          
S/G/Y/R/B/O NT_023811AC0916391178612262          
S/G/Y/R/B/O NT_023811AC0192461180289963CHLC.GATA25E10    8606.601AC103864, AC019246, AC103864
S/G/Y/R/B/O NT_023811AC1038641180452493          
S/G/Y/R/B/O NT_023811AC0239261180673433          
S/G/Y/R/B/O NT_023811AC0122381182093493          
S/G/Y/R/B/O NT_023811AC0254791183956331RH1043588450.63    1AC068399, AC025479, AC068399, AF284562
S/G/Y/R/B/O NT_023811AC0254791185927081RH3996311415.60    2AP001132, AC009639, AC025479, AP000801, AP001132, AP001185
S/G/Y/R/B/O NT_023811AC0683991184239953          
S/G/Y/R/B/O NT_023811AC0138151184937972          
S/G/Y/R/B/O NT_023811AC0242891185968811          
S/G/Y/R/B/O NT_023811AF1780301186116983CHLC.GATA8G03.443    8612.001AC013815, AC013710, AC013815
S/G/Y/R/B/O NT_023811AF1780301186352023RH991338458.70    1AC013815, AC013815, AC023142, AF178030
S/G/Y/R/B/O NT_023811AF1780301186355953RH404958458.70    1AC013815, AC013815, AC023142, AF178030
S/G/Y/R/B/O NT_023811AF1780301186383483RH161768458.70    1AC013815, AC013815, AC023142, AF178030
S/G/Y/R/B/O NT_023811AF1780301186383803RH264688458.70    1AC013815, AC013815, AC023142, AF178030
S/G/Y/R/B/O NT_023811AF1780301186765113RH136308458.70    1 AC023142, AF178030
S/G/Y/R/B/O NT_023811AF1780301187951533WI-16182    8609.201 AF178030
S/G/Y/R/B/O NT_023811AF1780301187951533RH621588450.42    1 AF178030
S/G/Y/R/B/O NT_023811AF1780301188021633RH760298458.70    1 AF178030
S/G/Y/R/B/O NT_023811AF1303421189150933          
S/G/Y/R/B/O NT_023811AF1303431194236693WI-5098    8616.001 AF130343
S/G/Y/R/B/O NT_023811AC0909941195249812          
S/G/Y/R/B/O NT_023811AC0739591196294891          
S/G/Y/R/B/O NT_023811AC1051771196323872          
S/G/Y/R/B/O NT_023811AC0235201198706333RH170688463.74    1AP002905, AC012247, AC023520, AP002850, AP002905
S/G/Y/R/B/O NT_023811AC0235201198732453RH105178463.74    1AP002905, AC012247, AC023520, AP002850, AP002905
S/G/Y/R/B/O NT_023811AP0029051199250993RH692568463.74    1AC091707, AC091707, AP002850, AP002905
S/G/Y/R/B/O NT_023811AC0917071200059381          
S/G/Y/R/B/O NT_023811AC0167291200089241          
S/G/Y/R/B/O NT_023811AP0040741200738483WI-14191    8631.301AC016729, AC016729, AC087350, AC087350, AP004074
S/G/Y/R/B/O NT_023811AP0040741200738483RH621708468.63    1AC016729, AC016729, AC087350, AC087350, AP004074
S/G/Y/R/B/O NT_023811AP0040741200747343RH107858468.25    1AC016729, AC016729, AC087350, AC087350, AP004074
S/G/Y/R/B/O NT_023811AP0040741200750083RH8712  74892.00  1AC016729, AC016729, AC087350, AC087350, AP004074
S/G/Y/R/B/O NT_023811AP0040741201635553RH625118463.74  8617.801AC016729, AC016729, AC087350, AC087350, AC104391, AP004074
S/G/Y/R/B/O NT_023811AP0040741201657723RH672898463.74    1AC016729, AC016729, AC087350, AC087350, AC104391, AP004074
S/G/Y/R/B/O NT_023811AP0040741201949093WI-5851    8631.401 AC104391, AP004074
S/G/Y/R/B/O NT_023811AP0037871202294843          
S/G/Y/R/B/O NT_023811AC0274191203248081          
S/G/Y/R/B/O NT_023811AC0237781203257551          
S/G/Y/R/B/O NT_023811AC0791961203321511          
S/G/Y/R/B/O NT_023811AC0841141203410263          
S/G/Y/R/B/O NT_023811AC0262581205301532          
S/G/Y/R/B/O NT_023811AC0243291206750983CHLC.GATA6B02    8626.401 AC024329
S/G/Y/R/B/O NT_023811AC0873611207623342          
S/G/Y/R/B/O NT_023811AC0225281208398231          


  NT_023811 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023811AP0042951210260053RH405628463.94    1 AP004295
S/G/Y/R/B/O NT_023811AP0042951210289383RH686378463.94    1AP004291, AP004291, AP004295
S/G/Y/R/B/O NT_023811AP0042951210297113RH405648463.74    1AP004291, AP004291, AP004295
S/G/Y/R/B/O NT_023811AP0042951210309143RH669308463.54    1AP004291, AP004291, AP004295
S/G/Y/R/B/O NT_023811AP0042911210328173          
S/G/Y/R/B/O NT_023811AP0034751211881203RH265048465.76    1 AC021937, AP003475
S/G/Y/R/B/O NT_023811AP0034751211882823RH915588463.54    1 AC021937, AP003475
S/G/Y/R/B/O NT_023811AP0034751211928493RH711648466.38    1 AC021937, AP003475
S/G/Y/R/B/O NT_023811AP0034751212554843RH481048463.74    1 AC020988, AC021937, AP003475
S/G/Y/R/B/O NT_023811AP0034751212666633RH162438463.74    1AP003476, AC020988, AC021937, AC087845, AP003475, AP003476
S/G/Y/R/B/O NT_023811AP0034751212684213RH621088463.74  8617.801AP003476, AC020988, AC021937, AC087845, AP003475, AP003476
S/G/Y/R/B/O NT_023811AP0034751212970293RH621238463.54  8617.801AP003476, AC020988, AC021937, AC024352, AC087845, AP003475, AP003476
S/G/Y/R/B/O NT_023811AP0034751212982933RH671168463.94    1AP003476, AC020988, AC021937, AC024352, AC087845, AP003475, AP003476
S/G/Y/R/B/O NT_023811AP0034751213013703RH477478463.54    1AP003476, AC020988, AC021937, AC087845, AP003475, AP003476
S/G/Y/R/B/O NT_023811AP0034761213170373RH121348463.54    1 AC020988, AC087845, AP003476
S/G/Y/R/B/O NT_023811AP0034761213245683RH362028463.74    1 AC020988, AC024352, AC087845, AP003476
S/G/Y/R/B/O NT_023811AP0034761214210883RH1035198463.74    1AP003493, AC024352, AP003476, AP003493
S/G/Y/R/B/O NT_023811AP0034761214252193RH119488463.74    1 AC024352
S/G/Y/R/B/O NT_023811AP0034931214436343          
S/G/Y/R/B/O NT_023811AC0235901215753323          
S/G/Y/R/B/O NT_023811AP0034961216488563RH361538463.54    1AP003494, AP003494, AP003496
S/G/Y/R/B/O NT_023811AP0034941217326753          
S/G/Y/R/B/O NT_023811AP0034681218136513WI-3313    8617.901 AC068953, AP003468
S/G/Y/R/B/O NT_023811AP0042171219515763          
S/G/Y/R/B/O NT_023811AP0042831221557323RH933038463.64    1 AB008822, AP004283
S/G/Y/R/B/O NT_023811AC1079531221862713          
S/G/Y/R/B/O NT_023811AC0800331223382373RH405988463.74    1 AC023487, AC080033
S/G/Y/R/B/O NT_023811AC0800331223391103RH449878463.44    1 AC023487, AC080033
S/G/Y/R/B/O NT_023811AC0800331223468753RH1039198463.54    1 AC080033
S/G/Y/R/B/O NT_023811AC0095141224526543RH1027108466.99    1AC087856, AC090451, AC009514, AC087856, AC090451
S/G/Y/R/B/O NT_023811AC0095141224766913RH472698463.74    1AC087856, AC090451, AC009514, AC087856, AC090451
S/G/Y/R/B/O NT_023811AC0095141224767913SGC32002    8617.801AC087856, AC090451, AC009514, AC087856, AC090451
S/G/Y/R/B/O NT_023811AC0095141224767913RH14786  82530.00  1AC087856, AC090451, AC009514, AC087856, AC090451
S/G/Y/R/B/O NT_023811AC0095141224768613RH622728463.54  8619.701AC087856, AC090451, AC009514, AC087856, AC090451
S/G/Y/R/B/O NT_023811AC0904511225518872          
S/G/Y/R/B/O NT_023811AC0217331226049222          
S/G/Y/R/B/O NT_023811AC0166601227881721RH8331  83251.00  1AC107870, AC016660, AC107870, L46720
S/G/Y/R/B/O NT_023811AC0166601227884291RH411145138.08    1AC107870, AC016660, AC107870, L46720
S/G/Y/R/B/O NT_023811AC0166601227884621RH690568466.07    1AC107870, AC016660, AC107870, L46720
S/G/Y/R/B/O NT_023811AC0166601227927411D8S269    8619.701AC107870, AC107870
S/G/Y/R/B/O NT_023811AC0166601227927411RH132848463.64    1AC107870, AC107870
S/G/Y/R/B/O NT_023811AC0878561228088631RH1877  17930.00  2AC008058, AC008058
S/G/Y/R/B/O NT_023811AC1078701228225632RH624128461.81  8618.301AC016660, AC016660, AC107870
S/G/Y/R/B/O NT_023811AC1078701228226012RH405858463.74    1AC016660, AC016660, AC107870
S/G/Y/R/B/O NT_023811AC1078701228242832RH672188463.74    1AC016660, AC016660, AC107870
S/G/Y/R/B/O NT_023811AC0117151228857711          
S/G/Y/R/B/O NT_023811AC0219451229778981          
S/G/Y/R/B/O NT_023811AC0361551230638151RH625998465.16  8617.701AC021945, AC021945, AC036155
S/G/Y/R/B/O NT_023811AC1040401231413323          
S/G/Y/R/B/O NT_023811AC0183771232779783          


  NT_023811 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023811AC0074811233818383          
S/G/Y/R/B/O NT_023811AC0607881235164513          
S/G/Y/R/B/O NT_023811AC0928171236941683          
S/G/Y/R/B/O NT_023811AC0265961238244282RH38042  84174.00  1AC092817, AC026596, AC092817
S/G/Y/R/B/O NT_023811AC0265961238248612RH624448510.02  8648.901AC092817, AC026596, AC092817
S/G/Y/R/B/O NT_023811AC0265961238308022RH697858511.22    1AC092817, AC026596, AC092817
S/G/Y/R/B/O NT_023811AC0265961238369742RH160368506.52    1AC092817, AC026596, AC092817
S/G/Y/R/B/O NT_023811AC0265961238378352RH405878510.43    1AC092817, AC026596, AC092817
S/G/Y/R/B/O NT_023811AC0265961238380132RH625928505.96  8680.201AC092817, AC026596, AC092817
S/G/Y/R/B/O NT_023811 - RH405608465.76    0  
S/G/Y/R/B/O NT_023811 - WI-18017    8617.701AC107877, AC107877
S/G/Y/R/B/O NT_023811 - RH406118463.74    0AP003476, AC020988, AC021937, AC087845, AP003476
S/G/Y/R/B/O NT_023811 - WI-17164    8617.701AP004710, AC105142, AP004710
S/G/Y/R/B/O NT_023811 - RH451928465.76    0  
S/G/Y/R/B/O NT_023811 - WI-17825    8617.701 L31529
S/G/Y/R/B/O NT_023811 - RH456208465.76    0  
S/G/Y/R/B/O NT_023811 - WI-17462    8619.601AC107877, AP004710, AC105142, AC107877, AP004710
S/G/Y/R/B/O NT_023811 - RH480178465.76    1AC068553, AC091563, AC068553, AC091563
S/G/Y/R/B/O NT_023811 - WI-5665    8619.601AP004710, AC105142, AP004710
S/G/Y/R/B/O NT_023811 - RH668398459.54    1AC020603, AC020603
S/G/Y/R/B/O NT_023811 - WI-5836    8619.602AC068413, AC068413, AC106013, AC068413, AC068413, AC106013
S/G/Y/R/B/O NT_023811 - WI-21130    8631.901AC090922, AC011004, AC083932, AC090922, AC091575, AF295017