Chromosome 8 - RH Maps - Single Contig

Chromosome 8 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_008060	NT_023779	NT_023744	NT_008227	NT_023736	NT_019483	NT_008010	NT_008161
NT_015280	NT_030737	NT_023704	NT_008205	NT_008300	NT_023666	NT_033187	NT_033199
NT_007988	NT_007993	NT_030743	NT_033201	NT_007995	NT_026349	NT_033197	NT_008251
NT_008045	NT_008176	NT_017505	NT_008216	NT_023678	NT_023878	NT_017431	NT_023806
NT_023679	NT_008201	NT_023727	NT_033189	NT_023795	NT_008014	NT_008101	NT_008050
NT_008231	NT_008026	NT_023673	NT_029343	NT_033186	NT_008218	NT_023672	NT_030735
NT_023660	NT_008183	NT_008166	NT_023676	NT_023821	NT_023732	NT_008209	NT_008055
NT_008186	NT_008292	NT_007972	NT_023682	NT_008117	NT_023717	NT_008007	NT_023693
NT_008059	NT_008046	NT_008144	NT_033198	NT_008048	NT_033200	NT_023670	NT_008289
NT_023742	NT_023811	NT_031821	NT_023705	NT_023663	NT_033191	NT_033195	NT_008157
NT_023726	NT_033196	NT_008023	NT_023715	NT_030744	NT_023709	NT_030741	NT_008150
NT_025796	NT_007994	NT_028251	NT_023662	NT_033193	NT_023838	NT_008104	NT_033185
NT_027068	NT_030032	NT_033192	NT_008127	NT_033194	NT_023747	NT_023684	NT_031818

NT_023704

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_023704	AC015520	19281150	1
S/G/Y/R/B/O	NT_023704	AC015465	19439592	1	RH62331	8	81.65			8	79.50	1		AC015465
S/G/Y/R/B/O	NT_023704	AC015465	19439594	1	RH38052			8	983.00			1		AC015465
S/G/Y/R/B/O	NT_023704	AC015465	19439668	1	RH10595	8	79.27					1		AC015465
S/G/Y/R/B/O	NT_023704	AC015465	19439678	1	RH11513	8	80.31					1		AC015465
S/G/Y/R/B/O	NT_023704	AC015465	19458126	1	RH37828			8	978.00			1		AC015465
S/G/Y/R/B/O	NT_023704	AC069005	19320127	1
S/G/Y/R/B/O	NT_023704	AC024993	19543425	2	RH17545	8	81.03					1	AF271406,	AC024993, AF271406
S/G/Y/R/B/O	NT_023704	AC024993	19543488	2	RH62365	8	81.44	8	995.00	8	79.80	1	AF271406,	AC024993, AF271406
S/G/Y/R/B/O	NT_023704	AC024993	19603523	2	WI-16744					8	87.90	1	AF271406,	AC024993, AF271406
S/G/Y/R/B/O	NT_023704	AC024993	19603523	2	RH62376	8	60.98					1	AF271406,	AC024993, AF271406
S/G/Y/R/B/O	NT_023704	AF271406	19623040	1
S/G/Y/R/B/O	NT_023704	AC090541	19631456	1
S/G/Y/R/B/O	NT_023704	AF127414	19645666	1
S/G/Y/R/B/O	NT_023704	AC022559	20525977	1	RH13243	8	83.76	8	1045.00			1		AC022559
S/G/Y/R/B/O	NT_023704	AC022559	20590529	1	RH7092	8	85.92			8	82.50	1	AC090805,	AC022559, AC090805
S/G/Y/R/B/O	NT_023704	AC090786	19807078	1	WI-4688					8	88.90	1		AC090786
S/G/Y/R/B/O	NT_023704	AC090786	19846666	1	RH62130	8	85.37					1		AC090786
S/G/Y/R/B/O	NT_023704	AC090786	19846666	1	WI-21956					8	75.50	1		AC090786
S/G/Y/R/B/O	NT_023704	AC090786	19857683	1	RH68573	8	80.52					1		AC090786
S/G/Y/R/B/O	NT_023704	AC090786	19914356	1	RH103012	8	82.04					1		AC090786
S/G/Y/R/B/O	NT_023704	AC090786	19920106	1	RH98563	8	85.88					1		AC090786
S/G/Y/R/B/O	NT_023704	AC090786	19922702	1	RH32947			8	961.00			2	AC068880,	AC068880, AC090786
S/G/Y/R/B/O	NT_023704	AC090786	19923011	1	WI-17471					8	88.00	2	AC068880,	AC068880, AC090786
S/G/Y/R/B/O	NT_023704	AC090786	19923011	1	RH62433	8	64.10					2	AC068880,	AC068880, AC090786
S/G/Y/R/B/O	NT_023704	AC090786	19923961	1	RH14215			8	945.00			2	AC068880,	AC068880, AC090786
S/G/Y/R/B/O	NT_023704	AC090741	19973901	2	RH31046			8	1014.00			1	AC015465, AC100802,	AC015465, AC074252, AC090741, AC100802
S/G/Y/R/B/O	NT_023704	AC100802	20010592	3	RH36522	8	64.82					1	AC015465,	AC015465, AC074252
S/G/Y/R/B/O	NT_023704	AC100802	20011608	3	RH70259	8	81.83					1	AC015465, AC015520, AC090741,	AC015465, AC015520, AC074252, AC090741, AC100802, X52978
S/G/Y/R/B/O	NT_023704	AC100802	20011741	3	RH40526	8	82.06					1	AC015465, AC015520, AC090741,	AC015465, AC015520, AC074252, AC090741, AC100802, X52978
S/G/Y/R/B/O	NT_023704	AC100802	20021417	3	AFM078XB11					8	87.10	1	AC015465, AC090741,	AC015465, AC074252, AC090741
S/G/Y/R/B/O	NT_023704	AC100802	20137091	3	RH48652	8	85.88					1		AC100802
S/G/Y/R/B/O	NT_023704	AC025853	20264607	1	WI-19010					8	89.10	1		AC025853
S/G/Y/R/B/O	NT_023704	AC025853	20264607	1	RH62387	8	61.82					1		AC025853
S/G/Y/R/B/O	NT_023704	AC025853	20265572	1	RH69321	8	83.76					1		AC025853
S/G/Y/R/B/O	NT_023704	AC025853	20265596	1	RH44158	8	85.09					1		AC025853
S/G/Y/R/B/O	NT_023704	AC025853	20290755	1	WI-20580					8	89.00	1		AC025853, AF123653
S/G/Y/R/B/O	NT_023704	AC025853	20290800	1	RH103113	8	84.96					1		AC025853, AF123653
S/G/Y/R/B/O	NT_023704	AC025853	20291995	1	RH18459	8	83.76					1		AC025853, AF123653
S/G/Y/R/B/O	NT_023704	AC023403	20318063	3
S/G/Y/R/B/O	NT_023704	AC090805	20612638	1
S/G/Y/R/B/O	NT_023704	AC018541	20640375	2
S/G/Y/R/B/O	NT_023704	AC021955	20877371	3	RH26986	1	113.98					3	AC105053, AL358433, AL591845,	AC087619, AC105053, AL358433, AL591845
S/G/Y/R/B/O	NT_023704	AC015468	20990161	3	RH102665	8	89.22					1	AC069005,	AC015468, AC069005, AC103719
S/G/Y/R/B/O	NT_023704		-		RH42828			8	1031.00			1	AC026572, AP003477,	AC012214, AC013704, AC016250, AC026572, AP003477
S/G/Y/R/B/O	NT_023704		-		WI-6088					8	82.40	1	AC009695,	AC009695
S/G/Y/R/B/O	NT_023704		-		WI-17568					8	87.70	1	AC068880,	AC068880
S/G/Y/R/B/O	NT_023704		-		WI-15862					8	87.70	1	AC068880,	AC068880