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  Chromosome 8 - RH Maps - Single Contig
 

Chromosome 8 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_008060 NT_023779 NT_023744 NT_008227 NT_023736 NT_019483 NT_008010 NT_008161
NT_015280 NT_030737 NT_023704 NT_008205 NT_008300 NT_023666 NT_033187 NT_033199
NT_007988 NT_007993 NT_030743 NT_033201 NT_007995 NT_026349 NT_033197 NT_008251
NT_008045 NT_008176 NT_017505 NT_008216 NT_023678 NT_023878 NT_017431 NT_023806
NT_023679 NT_008201 NT_023727 NT_033189 NT_023795 NT_008014 NT_008101 NT_008050
NT_008231 NT_008026 NT_023673 NT_029343 NT_033186 NT_008218 NT_023672 NT_030735
NT_023660 NT_008183 NT_008166 NT_023676 NT_023821 NT_023732 NT_008209 NT_008055
NT_008186 NT_008292 NT_007972 NT_023682 NT_008117 NT_023717 NT_008007 NT_023693
NT_008059 NT_008046 NT_008144 NT_033198 NT_008048 NT_033200 NT_023670 NT_008289
NT_023742 NT_023811 NT_031821 NT_023705 NT_023663 NT_033191 NT_033195 NT_008157
NT_023726 NT_033196 NT_008023 NT_023715 NT_030744 NT_023709 NT_030741 NT_008150
NT_025796 NT_007994 NT_028251 NT_023662 NT_033193 NT_023838 NT_008104 NT_033185
NT_027068 NT_030032 NT_033192 NT_008127 NT_033194 NT_023747 NT_023684 NT_031818


  NT_023666
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023666AC024958231914993          
S/G/Y/R/B/O NT_023666AC018422233820332          
S/G/Y/R/B/O NT_023666AC084091234748973          
S/G/Y/R/B/O NT_023666AF106564236905423RH478538104.20    1AC105359, AC021000, AC105359, AF106564
S/G/Y/R/B/O NT_023666AF106564237055983RH984718101.18    1AC105359, AC021000, AC105359, AF106564, AF260013
S/G/Y/R/B/O NT_023666AF106564237293593WI-5833    8104.501AC105359, AC021000, AC105359, AF106564, AF260013
S/G/Y/R/B/O NT_023666AF106564237354753RH255548103.76    1AC105359, AC021000, AC105359, AF106564, AF260013
S/G/Y/R/B/O NT_023666AC105359237769983RH621538104.20  8104.501AC107373, AC105359, AC107373, AF176680, AF260013
S/G/Y/R/B/O NT_023666AC105359237784543RH751688103.60    1AC107373, AC105359, AC107373, AF176680, AF260013, X05608
S/G/Y/R/B/O NT_023666AC105359237784813RH711708103.98    1AC107373, AC105359, AC107373, AF176680, AF260013, X05608
S/G/Y/R/B/O NT_023666AC105359237827493RH622118103.34  8104.501AC107373, AC105359, AC107373, AF176680, AF260013, L04147, S70309
S/G/Y/R/B/O NT_023666AC105359237832083RH13793  81309.00  1AC107373, AC107373, AF176680, AF260013, L04147
S/G/Y/R/B/O NT_023666AC107373238251912WI-3922    8104.501AC073581, AC073581, AC107373, AF176680
S/G/Y/R/B/O NT_023666AC073581239043563RH31049  81196.00  1 AC073581, AF267908
S/G/Y/R/B/O NT_023666AC041005240214782RH664348104.20    1 AC041005
S/G/Y/R/B/O NT_023666AC041005240652162RH31050  81240.00  1AC090104, AC041005, AC079783, AC090104
S/G/Y/R/B/O NT_023666AC091185242416131RH929928104.20    1AC027630, AC027630, AC079783, AC091185
S/G/Y/R/B/O NT_023666AC091185242416221RH623448104.14  8104.501 AC079783, AC091185
S/G/Y/R/B/O NT_023666AC091185242454001RH623338102.14  8104.501AC027630, AC027630, AC079783, AC091185, X15215
S/G/Y/R/B/O NT_023666AC091185242454001RH1856  81230.00  1AC027630, AC027630, AC079783, AC091185, X15215
S/G/Y/R/B/O NT_023666AC091185242454241RH625988102.1481217.008104.501AC027630, AC027630, AC079783, AC091185, X15215
S/G/Y/R/B/O NT_023666AC090104241654001          
S/G/Y/R/B/O NT_023666AC027630242528091          
S/G/Y/R/B/O NT_023666AF263550243315433RH33737  81255.00  1AC027630, AC027630, AC104562, AF263550
S/G/Y/R/B/O NT_023666AF263550243342653RH623038103.39  8104.501AC027630, AC027630, AC104562, AF263550
S/G/Y/R/B/O NT_023666AF263550243944693RH624558103.39  8104.501 AC104562, AF263550
S/G/Y/R/B/O NT_023666AC087755244109541          
S/G/Y/R/B/O NT_023666AC009623245139933RH921458103.98    1AC087755, AC087755
S/G/Y/R/B/O NT_023666AC090103246545072          
S/G/Y/R/B/O NT_023666AC080043247960323          
S/G/Y/R/B/O NT_023666AC023566248743292          
S/G/Y/R/B/O NT_023666AC113186249241982          
S/G/Y/R/B/O NT_023666AC079097249630421          
S/G/Y/R/B/O NT_023666AF172273249739621          
S/G/Y/R/B/O NT_023666AC022911250918163RH676948103.01    1 AC022911
S/G/Y/R/B/O NT_023666AC022911251743263RH37917  81295.00  1AC011726, AC011726, AC022911
S/G/Y/R/B/O NT_023666AC022911251994473RH622838104.14  8103.701AC011726, AC011726, AC022911
S/G/Y/R/B/O NT_023666AC022911251994543RH762338102.96    1AC011726, AC011726, AC022911
S/G/Y/R/B/O NT_023666AC022911252009463RH1043848104.14    1AC011726, AC011726, AC022911
S/G/Y/R/B/O NT_023666AC022911252013743RH1025718101.88    1AC011726, AC011726, AC022911
S/G/Y/R/B/O NT_023666AC011726252319211RH365188106.43    1 AC011726
S/G/Y/R/B/O NT_023666AC011726252396271RH621748103.98  8104.501 AF255051
S/G/Y/R/B/O NT_023666AC011726252397761RH8053  81295.00  1 AC011726, AF255051
S/G/Y/R/B/O NT_023666AC011726252419111RH1033808103.98    1AC095351, AC011726, AC095351, U69570
S/G/Y/R/B/O NT_023666AC011726252419671RH367688105.90    2AC095351, AC011726, AC095351, U69570
S/G/Y/R/B/O NT_023666AC015743252936272RH750968101.07    1AC011726, AC011726
S/G/Y/R/B/O NT_023666AC015743252936282RH364668106.15    1AC011726, AC011726, AC015743
S/G/Y/R/B/O NT_023666AC015743253318312RH809438102.90    1 AC015743
S/G/Y/R/B/O NT_023666AC015743253318902RH38058  81306.00  1 AC015743
S/G/Y/R/B/O NT_023666AC015743253319112RH74599  81313.00  1 AC015743


  NT_023666 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023666AC015564254834141RH405668105.28    1 AB020777, AC015564
S/G/Y/R/B/O NT_023666AC015564254844871RH284058106.15    1 AB020777, AC015564
S/G/Y/R/B/O NT_023666AC015564254848591RH620338105.60  8107.001 AB020777, AC015564
S/G/Y/R/B/O NT_023666AC015564254848911RH99808106.04    1 AB020777, AC015564
S/G/Y/R/B/O NT_023666AC015564254851081RH249448104.14    1 AB020777, AC015564
S/G/Y/R/B/O NT_023666AC015564257789771RH624038105.39  8107.001AC025712, AC091675, AC015564, AC025712, AC091675
S/G/Y/R/B/O NT_023666AC015564257803561RH458598106.15    1AC025712, AC091675, AC015564, AC025712, AC091675
S/G/Y/R/B/O NT_023666AC015564257860161RH624358103.98  8103.901AC025712, AC091675, AC015564, AC025712, AC091675
S/G/Y/R/B/O NT_023666AC015564258765551RH658026199.37    2AL049693, AC015564, AC024555, AL049693, AL512409
S/G/Y/R/B/O NT_023666AC067904254922781          
S/G/Y/R/B/O NT_023666AC022839255472823          
S/G/Y/R/B/O NT_023666AC091675257643272RH7797  81319.00  1AC025712, AC025712, AC091675
S/G/Y/R/B/O NT_023666AC091675257777142RH624348105.39  8106.901AC025712, AC025712, AC091675
S/G/Y/R/B/O NT_023666AC025712257555051          
S/G/Y/R/B/O NT_023666 - RH1023348101.60    0  
S/G/Y/R/B/O NT_023666 - WI-961    8102.101AC022597, AC051642, AC022597, AC051642
S/G/Y/R/B/O NT_023666 - RH1030978101.39    0  
S/G/Y/R/B/O NT_023666 - RH104237899.29    1AC022597, AC051642, AF216674, AC022597, AC051642, AF216674
S/G/Y/R/B/O NT_023666 - RH117738103.98    0  
S/G/Y/R/B/O NT_023666 - RH128808102.25    1AC022597, AC051642, AF216674, AC022597, AC051642, AF216674
S/G/Y/R/B/O NT_023666 - RH16282898.55    1AC022597, AC051642, AF216674, AC022597, AC051642, AF216674
S/G/Y/R/B/O NT_023666 - RH16405898.26    1AC022597, AC051642, AF216674, AC022597, AC051642, AF216674
S/G/Y/R/B/O NT_023666 - RH16493898.58    1AC022597, AC051642, AF216674, AC022597, AC051642, AF216674
S/G/Y/R/B/O NT_023666 - RH165058102.79    1AC022597, AC051642, AF216674, AC022597, AC051642, AF216674
S/G/Y/R/B/O NT_023666 - RH404978100.31    1AC022597, AC051642, AF216674, AC022597, AC051642, AF216674
S/G/Y/R/B/O NT_023666 - RH405998100.53    1AC022597, AC051642, AF216674, AC022597, AC051642, AF216674
S/G/Y/R/B/O NT_023666 - RH406088100.10    0AC090103, AC090103
S/G/Y/R/B/O NT_023666 - RH406178102.30    1AC090197, AF279339, AC090197, AF279339
S/G/Y/R/B/O NT_023666 - RH418608105.82    0  
S/G/Y/R/B/O NT_023666 - RH455428106.15    0 AB020777
S/G/Y/R/B/O NT_023666 - RH456068104.20    1AC023202, AC023202
S/G/Y/R/B/O NT_023666 - RH621688103.76    1AC084026, AC084026
S/G/Y/R/B/O NT_023666 - RH621718105.18    1AC026979, AC044849, AC026979, AC044849
S/G/Y/R/B/O NT_023666 - RH621948102.79  8102.101AC012119, AC012119, AF242179
S/G/Y/R/B/O NT_023666 - RH622268103.34  8102.101AC104561, AC104561
S/G/Y/R/B/O NT_023666 - RH62275899.29  8102.101AC012574, AC022597, AC012574, AC022597
S/G/Y/R/B/O NT_023666 - RH62353898.77  8102.101AC022597, AC051642, AC022597, AC051642
S/G/Y/R/B/O NT_023666 - RH623638102.79  8102.101AC104561, AF216674, AC104561, AF216674
S/G/Y/R/B/O NT_023666 - RH623858100.03    0AC022930, AC037459, AC022930, AC037459
S/G/Y/R/B/O NT_023666 - RH624508101.82  8103.301AC022597, AC051642, AF216674, AC022597, AC051642, AF216674
S/G/Y/R/B/O NT_023666 - TIGR-A003P18    8103.301AC022597, AC051642, AF216674, AC022597, AC051642, AF216674
S/G/Y/R/B/O NT_023666 - RH62523899.72  8104.501AC104561, AF191252, AF216674, AC104561, AF191252, AF216674
S/G/Y/R/B/O NT_023666 - RH625948103.34  8104.501AC022597, AC051642, AC022597, AC051642
S/G/Y/R/B/O NT_023666 - RH626048105.60    1AC044849, AC044849
S/G/Y/R/B/O NT_023666 - RH661578101.56    0  
S/G/Y/R/B/O NT_023666 - RH67665898.47    0  
S/G/Y/R/B/O NT_023666 - RH67885898.05    0  
S/G/Y/R/B/O NT_023666 - RH705078100.31    1AC012119, AC012119, AF098463, AF242179
S/G/Y/R/B/O NT_023666 - RH714098102.79    1AC012119, AC012119, AF242179
S/G/Y/R/B/O NT_023666 - RH753078102.30    0  


  NT_023666 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023666 - RH757988103.34    1AC021678, AC021678
S/G/Y/R/B/O NT_023666 - RH75939899.08    1AC090197, AF279339, AC090197, AF279339
S/G/Y/R/B/O NT_023666 - RH783458104.64    2AC067904, AL391647, AC041007, AC067904, AC073076, AL391647
S/G/Y/R/B/O NT_023666 - RH912888102.14    0 AC011817
S/G/Y/R/B/O NT_023666 - RH80596898.87    1AC022597, AC051642, AF216674, AC022597, AC051642, AF216674
S/G/Y/R/B/O NT_023666 - RH915808104.14    0  
S/G/Y/R/B/O NT_023666 - RH94244898.55    1AC012574, AC022597, AC051642, AC012574, AC022597, AC051642