Chromosome 8 - RH Maps - Single Contig

Chromosome 8 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_008060	NT_023779	NT_023744	NT_008227	NT_023736	NT_019483	NT_008010	NT_008161
NT_015280	NT_030737	NT_023704	NT_008205	NT_008300	NT_023666	NT_033187	NT_033199
NT_007988	NT_007993	NT_030743	NT_033201	NT_007995	NT_026349	NT_033197	NT_008251
NT_008045	NT_008176	NT_017505	NT_008216	NT_023678	NT_023878	NT_017431	NT_023806
NT_023679	NT_008201	NT_023727	NT_033189	NT_023795	NT_008014	NT_008101	NT_008050
NT_008231	NT_008026	NT_023673	NT_029343	NT_033186	NT_008218	NT_023672	NT_030735
NT_023660	NT_008183	NT_008166	NT_023676	NT_023821	NT_023732	NT_008209	NT_008055
NT_008186	NT_008292	NT_007972	NT_023682	NT_008117	NT_023717	NT_008007	NT_023693
NT_008059	NT_008046	NT_008144	NT_033198	NT_008048	NT_033200	NT_023670	NT_008289
NT_023742	NT_023811	NT_031821	NT_023705	NT_023663	NT_033191	NT_033195	NT_008157
NT_023726	NT_033196	NT_008023	NT_023715	NT_030744	NT_023709	NT_030741	NT_008150
NT_025796	NT_007994	NT_028251	NT_023662	NT_033193	NT_023838	NT_008104	NT_033185
NT_027068	NT_030032	NT_033192	NT_008127	NT_033194	NT_023747	NT_023684	NT_031818

NT_008161

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_008161	AC084085	12170821	1	RH42896			17	1863.00			2	AC004134,	AC004134, AC023247, AC084085
S/G/Y/R/B/O	NT_008161	AC084085	12544153	1	CHLC.GATA29D08					8	52.70	1	AC015641,	AC015641
S/G/Y/R/B/O	NT_008161	AC069321	12178090	1
S/G/Y/R/B/O	NT_008161	AC090133	12185449	1	RH78063	8	53.23					2	AC000385, AC069321,	AC000385, AC069321, AC090133
S/G/Y/R/B/O	NT_008161	AC090133	12208548	1	RH76623	8	51.65					1	AC069321,	AC069321, AC090133
S/G/Y/R/B/O	NT_008161	AC090133	12347145	1	RH42562	8	43.94					1	AC069321, AF188029,	AC069321, AC090133, AF188029
S/G/Y/R/B/O	NT_008161	AC090133	12347254	1	RH269			8	678.00			1	AF188029,	AC090133, AF188029
S/G/Y/R/B/O	NT_008161	AF188029	12351433	2
S/G/Y/R/B/O	NT_008161	AC068920	12478106	1	CHLC.GATA52F11					8	48.40	1	AC084085,	AC068412, AC068920, AC084085
S/G/Y/R/B/O	NT_008161	AC068920	12478140	1	CHLC.GATA23D06					8	54.60	1		AC068412, AC068920
S/G/Y/R/B/O	NT_008161	AC015641	12583178	2	RH62410	8	45.66	8	673.00	8	48.50	1	AC084085,	AC084085
S/G/Y/R/B/O	NT_008161	AC015641	12583202	2	RH10593	8	45.66					1	AC068920, AC084085,	AC015641, AC068412, AC068920, AC084085
S/G/Y/R/B/O	NT_008161	AC015641	12583312	2	RH12088	8	45.66					1	AC068920, AC084085,	AC015641, AC068412, AC068920, AC084085
S/G/Y/R/B/O	NT_008161	AC015641	12584605	2	RH25174	8	50.15					1	AC084085,	AC015641, AC068412, AC084085
S/G/Y/R/B/O	NT_008161	AC015641	12585402	2	RH62559	8	43.94			8	48.40	1	AC084085,	AC015641, AC068412, AC084085
S/G/Y/R/B/O	NT_008161	AC015641	12585402	2	RH62021	8	43.94			8	48.40	1	AC084085,	AC015641, AC068412, AC084085
S/G/Y/R/B/O	NT_008161	AC015641	12585485	2	RH12354	8	42.52					1	AC084085,	AC015641, AC068412, AC084085
S/G/Y/R/B/O	NT_008161	AC015641	12592442	2	WI-22147					8	56.20	1	AC084085,	AC015641, AC068412, AC084085
S/G/Y/R/B/O	NT_008161	AC015641	12592442	2	RH62620	8	53.23					1	AC084085,	AC015641, AC068412, AC084085
S/G/Y/R/B/O	NT_008161	AC015641	12599503	2	RH69819	8	42.52					1	AC084085,	AC015641, AC068412, AC084085
S/G/Y/R/B/O	NT_008161	AC015641	12612231	2	RH40575	8	45.66					1	AC084085,	AC015641, AC068412, AC084085
S/G/Y/R/B/O	NT_008161	AC013749	12708436	1	RH31042			8	707.00			1	AC011047, AC106845,	AC011047, AC013749, AC106845
S/G/Y/R/B/O	NT_008161	AC013749	12717713	1	RH103734	8	50.15					1	AC011047, AC074186, AC106845,	AC011047, AC013749, AC074186, AC106845
S/G/Y/R/B/O	NT_008161	AC106845	12718926	2
S/G/Y/R/B/O	NT_008161	AC074186	12737024	1
S/G/Y/R/B/O	NT_008161	AC011047	12737994	1
S/G/Y/R/B/O	NT_008161	AC019270	12911829	2	RH69264	8	49.89					1	AC074186,	AC019270, AC074186
S/G/Y/R/B/O	NT_008161	AC022844	13005881	3
S/G/Y/R/B/O	NT_008161	AC022832	13110301	3	RH92548	8	56.26					1		AC022832
S/G/Y/R/B/O	NT_008161	AC022880	13236499	3
S/G/Y/R/B/O	NT_008161	AC022690	13388299	3
S/G/Y/R/B/O	NT_008161	AC023538	13537386	3
S/G/Y/R/B/O	NT_008161	AC022039	13691078	3
S/G/Y/R/B/O	NT_008161	AC009898	13785161	2
S/G/Y/R/B/O	NT_008161	AC023072	13910065	1
S/G/Y/R/B/O	NT_008161	AC068788	13913808	1
S/G/Y/R/B/O	NT_008161		-		RH17488	8	43.94					0
S/G/Y/R/B/O	NT_008161		-		RH14156			8	589.00			1	AF189745, AF252830,	AC074340, AF189745, AF202031, AF252830, AF285443, AY005129
S/G/Y/R/B/O	NT_008161		-		WI-13563					8	48.50	0		AC091050
S/G/Y/R/B/O	NT_008161		-		RH67483	8	42.54					1	AF284563,	AC068353, AF284563
S/G/Y/R/B/O	NT_008161		-		SGC34298					8	48.60	1	AC008005, AC019292,	AC008005, AC019292, AC084127
S/G/Y/R/B/O	NT_008161		-		WI-10386					8	49.50	1	AC040926,	AC040926
S/G/Y/R/B/O	NT_008161		-		WI-21767					8	52.00	1	AC090567,	AC036225, AC041041, AC090567
S/G/Y/R/B/O	NT_008161		-		SGC33697					8	56.20	1	AC090567,	AC036225, AC041041, AC090567
S/G/Y/R/B/O	NT_008161		-		WI-11714					8	56.20	2	AC084275, AC112673, AF303734,	AC084275, AC112673, AF303734
S/G/Y/R/B/O	NT_008161		-		SGC38394					8	56.20	1	AC025857, AC069185, AC090790,	AC025857, AC069185, AC090790, AF271897, AF285442