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  Chromosome 8 - RH Maps - Single Contig
 

Chromosome 8 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_008060 NT_023779 NT_023744 NT_008227 NT_023736 NT_019483 NT_008010 NT_008161
NT_015280 NT_030737 NT_023704 NT_008205 NT_008300 NT_023666 NT_033187 NT_033199
NT_007988 NT_007993 NT_030743 NT_033201 NT_007995 NT_026349 NT_033197 NT_008251
NT_008045 NT_008176 NT_017505 NT_008216 NT_023678 NT_023878 NT_017431 NT_023806
NT_023679 NT_008201 NT_023727 NT_033189 NT_023795 NT_008014 NT_008101 NT_008050
NT_008231 NT_008026 NT_023673 NT_029343 NT_033186 NT_008218 NT_023672 NT_030735
NT_023660 NT_008183 NT_008166 NT_023676 NT_023821 NT_023732 NT_008209 NT_008055
NT_008186 NT_008292 NT_007972 NT_023682 NT_008117 NT_023717 NT_008007 NT_023693
NT_008059 NT_008046 NT_008144 NT_033198 NT_008048 NT_033200 NT_023670 NT_008289
NT_023742 NT_023811 NT_031821 NT_023705 NT_023663 NT_033191 NT_033195 NT_008157
NT_023726 NT_033196 NT_008023 NT_023715 NT_030744 NT_023709 NT_030741 NT_008150
NT_025796 NT_007994 NT_028251 NT_023662 NT_033193 NT_023838 NT_008104 NT_033185
NT_027068 NT_030032 NT_033192 NT_008127 NT_033194 NT_023747 NT_023684 NT_031818


  NT_008209
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008209AC025599738208193          
S/G/Y/R/B/O NT_008209AC016240739826612RH780148399.46    1AF261720, AC016240, AC068995, AF261720
S/G/Y/R/B/O NT_008209AC016240739831212RH100148399.46    1AF261720, AC016240, AC068995, AF261720
S/G/Y/R/B/O NT_008209AC016240740812392RH127908399.46    2AF261720, AC016240, AC068995, AC087769, AF261720
S/G/Y/R/B/O NT_008209AC103952741852393RH917948389.97    1 AC103952, AF303735
S/G/Y/R/B/O NT_008209AC103952741862733TIGR-A004Y31    8459.401 AC103952, AF303735
S/G/Y/R/B/O NT_008209AC103952741862733RH623488391.19    1 AC103952, AF303735
S/G/Y/R/B/O NT_008209AC103952741866473RH184348389.97    1 AC103952, AF303735
S/G/Y/R/B/O NT_008209AF110324742557913RH30623  83106.00  1 AF110324
S/G/Y/R/B/O NT_008209AF110324742642023RH452448389.97    1 AF110324
S/G/Y/R/B/O NT_008209AC087792743823323RH29185  83116.00  1AC087627, AC026288, AC087627, AC087792, AF188027, AF228729
S/G/Y/R/B/O NT_008209AC087627743976101          
S/G/Y/R/B/O NT_008209AC009713745371101RH135728387.0383126.00  1AC087672, AC090528, AC009672, AC009713, AC087672, AC090528
S/G/Y/R/B/O NT_008209AC087672744214932          
S/G/Y/R/B/O NT_008209AC090528745692651RH623238389.97  8458.801AC009713, AC022868, AC087672, AC009713, AC022868, AC087672, AC090528
S/G/Y/R/B/O NT_008209AC090528745702551RH8058  83174.00  1AC009713, AC022868, AC087672, AC009672, AC009713, AC022868, AC087672, AC090528
S/G/Y/R/B/O NT_008209AC022868746051221RH160018389.35    1  
S/G/Y/R/B/O NT_008209AC020670747954771RH623398375.77  8462.401AC111149, AF286885, AC020670, AC111149, AF286885
S/G/Y/R/B/O NT_008209AC008598746985773          
S/G/Y/R/B/O NT_008209AF286885748008841          
S/G/Y/R/B/O NT_008209AC111149748275012RH625048383.4083029.008464.201AF286885, AC111149, AF286885
S/G/Y/R/B/O NT_008209AC111149748276032RH623418382.8383020.008464.201AF286885, AC111149, AF286885
S/G/Y/R/B/O NT_008209AC111149748277672RH161668383.30    1AF286885, AC111149, AF286885
S/G/Y/R/B/O NT_008209AC018620748667182RH405048375.77    1AC111149, AC018620, AC021897, AC111149
S/G/Y/R/B/O NT_008209AC018620749230592RH126428398.79    1AC111149, AC018620, AC021897, AC111149
S/G/Y/R/B/O NT_008209AC018620749231552RH100288374.87    1AC111149, AC018620, AC021897, AC111149
S/G/Y/R/B/O NT_008209AC018620750011642RH621988383.71  8464.301AC100784, AC018620, AC021897, AC100784
S/G/Y/R/B/O NT_008209AC100784750296643RH404768374.18    1  
S/G/Y/R/B/O NT_008209AC100784750517063RH941048374.34    1 AC100784
S/G/Y/R/B/O NT_008209AC100784750522953RH621028374.18  8460.001 AC100784
S/G/Y/R/B/O NT_008209AC100784750534363RH930628374.18    1 AC100784
S/G/Y/R/B/O NT_008209AC100784750538343RH27145X92.32    1 AC100784
S/G/Y/R/B/O NT_008209AC027018752288073RH445068396.65    1AC022826, AC022826, AC027018
S/G/Y/R/B/O NT_008209AC027018752426743RH624698389.3583159.008461.101AC022826, AC022826, AC027018
S/G/Y/R/B/O NT_008209AC022826752889573RH755988344.80    1 AC022826
S/G/Y/R/B/O NT_008209AC022826753043083RH456498390.38    1 AC022826
S/G/Y/R/B/O NT_008209AC022826753314153RH8958  83138.00  1 AC022826
S/G/Y/R/B/O NT_008209AF261720754794281RH127908399.46    2AC016240, AC016240, AC068995, AC087769, AF261720
S/G/Y/R/B/O NT_008209AC036214755834903RH933418399.24    1AC018952, AC018952, AC036214
S/G/Y/R/B/O NT_008209AC036214756343333RH404708399.24    1AC018952, AC018952, AC036214
S/G/Y/R/B/O NT_008209AC036214756656553RH986358399.24    1AC018952, AC018952, AC036214
S/G/Y/R/B/O NT_008209AC036214756681353RH363518399.24    1AC018952, AC018952, AC036214
S/G/Y/R/B/O NT_008209AC018952756934623          
S/G/Y/R/B/O NT_008209AC009686757509711RH621378400.0283301.008491.501 AC009686
S/G/Y/R/B/O NT_008209AC009686757509811RH33712  83301.00  1 AC009686
S/G/Y/R/B/O NT_008209AC009686757510871RH788248401.60    1 AC009686
S/G/Y/R/B/O NT_008209AC009686757521111RH260018400.48    1 AC009686
S/G/Y/R/B/O NT_008209AC009686758430001RH31064  83316.00  1 AC009686
S/G/Y/R/B/O NT_008209 - RH1025708383.30    1AC022893, AC022893
S/G/Y/R/B/O NT_008209 - RH126928386.93    0  


  NT_008209 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008209 - RH128538383.25    1AC090280, AC090731, AF254984, AC090280, AC090731, AF207954, AF254984
S/G/Y/R/B/O NT_008209 - RH133508379.77    1AC016057, AC078906, AC016057, AC078906
S/G/Y/R/B/O NT_008209 - RH181658374.87    1AC090096, AC016519, AC090096
S/G/Y/R/B/O NT_008209 - RH404738375.77    1AC022893, AC022893
S/G/Y/R/B/O NT_008209 - RH405428375.77    1AC016057, AC022867, AC016057, AC022867
S/G/Y/R/B/O NT_008209 - RH405618375.77    1AC016057, AC078906, AC016057, AC078906
S/G/Y/R/B/O NT_008209 - RH463728375.77    1AC011003, AC073661, AC011003, AC073661, AC090254
S/G/Y/R/B/O NT_008209 - RH621228375.7782986.008461.901AC022893, AC022893
S/G/Y/R/B/O NT_008209 - RH30622  83075.00  1AC026616, AC026616
S/G/Y/R/B/O NT_008209 - RH32297  83070.00  1AC100782, AC020570, AC100782
S/G/Y/R/B/O NT_008209 - RH622708376.09  8462.401AC011131, AC024297, AC011131, AC024297
S/G/Y/R/B/O NT_008209 - RH622748377.24    1AC011131, AC024297, AC011131, AC024297
S/G/Y/R/B/O NT_008209 - RH625398375.7783007.008463.601AC013562, AC090735, AC013562, AC087818, AC090735
S/G/Y/R/B/O NT_008209 - RH626278375.77  8465.304AC022893, AL137013, AL163204, AL359737, AC022893, AL050303, AL137013, AL163204, AL359737
S/G/Y/R/B/O NT_008209 - RH684788374.45    1AC022867, AC104012, AC022867, AC104012
S/G/Y/R/B/O NT_008209 - RH704698375.50    1AC022893, AC022893
S/G/Y/R/B/O NT_008209 - RH712548381.48    1AC022893, AC022893, AF164115, AF301505
S/G/Y/R/B/O NT_008209 - RH913968382.62    1AC084251, AC090280, AF254984, AC084251, AC090280, AF254984
S/G/Y/R/B/O NT_008209 - RH939308375.81    0AC104012, AC104012
S/G/Y/R/B/O NT_008209 - RH941708383.40    1AC022893, AC022893