Chromosome 8 - RH Maps - Single Contig

Chromosome 8 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_008060	NT_023779	NT_023744	NT_008227	NT_023736	NT_019483	NT_008010	NT_008161
NT_015280	NT_030737	NT_023704	NT_008205	NT_008300	NT_023666	NT_033187	NT_033199
NT_007988	NT_007993	NT_030743	NT_033201	NT_007995	NT_026349	NT_033197	NT_008251
NT_008045	NT_008176	NT_017505	NT_008216	NT_023678	NT_023878	NT_017431	NT_023806
NT_023679	NT_008201	NT_023727	NT_033189	NT_023795	NT_008014	NT_008101	NT_008050
NT_008231	NT_008026	NT_023673	NT_029343	NT_033186	NT_008218	NT_023672	NT_030735
NT_023660	NT_008183	NT_008166	NT_023676	NT_023821	NT_023732	NT_008209	NT_008055
NT_008186	NT_008292	NT_007972	NT_023682	NT_008117	NT_023717	NT_008007	NT_023693
NT_008059	NT_008046	NT_008144	NT_033198	NT_008048	NT_033200	NT_023670	NT_008289
NT_023742	NT_023811	NT_031821	NT_023705	NT_023663	NT_033191	NT_033195	NT_008157
NT_023726	NT_033196	NT_008023	NT_023715	NT_030744	NT_023709	NT_030741	NT_008150
NT_025796	NT_007994	NT_028251	NT_023662	NT_033193	NT_023838	NT_008104	NT_033185
NT_027068	NT_030032	NT_033192	NT_008127	NT_033194	NT_023747	NT_023684	NT_031818

NT_031818

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_031818	AF205589	147910316	1	RH104428	22	99.26					1	AC022505,	AC022505, AF205589
S/G/Y/R/B/O	NT_031818	AF205589	147950773	1	WI-12784					8	720.50	1		AF205589
S/G/Y/R/B/O	NT_031818	AF205589	147956864	1	RH40530	8	563.39					1		AF205589
S/G/Y/R/B/O	NT_031818	AC022505	147621334	1	RH17325	8	563.39					1	AF205589,	AC022505, AF205589
S/G/Y/R/B/O	NT_031818	AC022505	147820781	1	RH62392	8	563.39			8	723.20	1	AC084125,	AC022505, AC084125
S/G/Y/R/B/O	NT_031818	AC022505	147820791	1	RH15786	8	564.40					1	AC084125,	AC022505, AC084125
S/G/Y/R/B/O	NT_031818	AC022505	147933812	1	RH65304	8	565.53					1		AC022505
S/G/Y/R/B/O	NT_031818	AC084125	147648753	1	RH80745	8	565.53					1	AC022505,	AC022505, AC084125, U70732
S/G/Y/R/B/O	NT_031818	AC084125	147652552	1	WI-15870					8	718.80	1	AC022505,	AC022505, AC084125
S/G/Y/R/B/O	NT_031818	AC084125	147666758	1	RH25253	1	713.63					1	AC022505,	AC022505, AC084125
S/G/Y/R/B/O	NT_031818	AC084125	147666843	1	RH62128	8	565.53			8	721.60	1	AC022505,	AC022505, AC084125
S/G/Y/R/B/O	NT_031818	AC084125	147667860	1	RH11522	8	565.53					1	AC022505,	AC022505, AC084125
S/G/Y/R/B/O	NT_031818	AC110280	147769152	2	WI-17683					8	721.60	1		AC110280
S/G/Y/R/B/O	NT_031818	AC110280	147849155	2	RH11627	8	563.39					1		AC110280
S/G/Y/R/B/O	NT_031818	AC110280	147851236	2	SGC31287					8	720.40	1		AC110280
S/G/Y/R/B/O	NT_031818	AF186192	148000032	3
S/G/Y/R/B/O	NT_031818	AF235103	148069904	3	WI-12556					8	721.60	1	AF186192,	AC087733, AC090775, AF186192, AF186193, AF228728, AF235103
S/G/Y/R/B/O	NT_031818	AF235103	148081331	3	RH65184	8	565.75					1	AC084225,	AC083959, AC084225, AC084856, AC087733, AC090775, AF186193, AF228728, AF235103
S/G/Y/R/B/O	NT_031818	AF235103	148162589	3	RH40626	8	563.39					1	AC084225,	AB061821, AC083959, AC084225, AC084856, AC090775, AF186193, AF228728, AF235103
S/G/Y/R/B/O	NT_031818	AF235103	148213277	3	RH71436	8	563.39					1	AC084225, AF216665,	AC083959, AC084225, AC084856, AF146367, AF216665, AF235103
S/G/Y/R/B/O	NT_031818	AF235103	148251446	3	WI-14009					8	735.80	1	AC084225, AC087720, AF176681, AF216665,	AC083959, AC084225, AC084856, AC087720, AC105449, AF146367, AF176681, AF216665, AF235103
S/G/Y/R/B/O	NT_031818	AF235103	148251739	3	RH14032			8	4495.00			1	AC084225, AC087720, AF176681, AF216665,	AC083959, AC084225, AC084856, AC087720, AC105449, AF146367, AF176681, AF216665, AF235103
S/G/Y/R/B/O	NT_031818	AF235103	148256943	3	RH40559	8	565.53					1	AC084225, AC087720, AF172272, AF216665,	AC083959, AC084225, AC084856, AC087720, AC105449, AF146367, AF172272, AF216665, AF235103
S/G/Y/R/B/O	NT_031818	AF235103	148275414	3	RH74682	8	565.53			8	721.00	1	AC087720, AF216665,	AC087720, AF216665, AF235103
S/G/Y/R/B/O	NT_031818	AF235103	148300655	3	RH62428	8	565.53			8	720.50	1	AC087720, AF176681, AF216665, AF216668, AF216670,	AC087720, AC105449, AF176681, AF216665, AF216668, AF216670, AF235103
S/G/Y/R/B/O	NT_031818	AF235103	148300696	3	RH44407	8	565.53					1	AC087720, AF176681, AF216665, AF216668, AF216670,	AC087720, AC105449, AF176681, AF216665, AF216668, AF216670, AF235103
S/G/Y/R/B/O	NT_031818	AF235103	148300719	3	RH40492	8	565.53					1	AC087720, AF176681, AF216665, AF216668, AF216670,	AC087720, AC105449, AF176681, AF216665, AF216668, AF216670, AF235103
S/G/Y/R/B/O	NT_031818	AC087720	148412575	1
S/G/Y/R/B/O	NT_031818	AF216668	148413333	1
S/G/Y/R/B/O	NT_031818	AC084225	148415579	1
S/G/Y/R/B/O	NT_031818	AF216665	148416785	1
S/G/Y/R/B/O	NT_031818	AF176681	148420775	1
S/G/Y/R/B/O	NT_031818	AF216670	148424497	1
S/G/Y/R/B/O	NT_031818		-		RH25368	8	566.10					0
S/G/Y/R/B/O	NT_031818		-		RH41881	8	566.10					0
S/G/Y/R/B/O	NT_031818		-		RH47058	8	565.53					0
S/G/Y/R/B/O	NT_031818		-		RH62500	8	563.83			8	717.70	0
S/G/Y/R/B/O	NT_031818		-		RH70666	8	563.83					0
S/G/Y/R/B/O	NT_031818		-		AFMA128XH5					8	724.60	0
S/G/Y/R/B/O	NT_031818		-		RH79683	8	563.95					0	AF205589,	AF205589
S/G/Y/R/B/O	NT_031818		-		SGC32628					8	726.00	0