Home    Genome Browser    BLAT Search    Help
  Chromosome 8 - RH Maps - Single Contig
 

Chromosome 8 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_008060 NT_023779 NT_023744 NT_008227 NT_023736 NT_019483 NT_008010 NT_008161
NT_015280 NT_030737 NT_023704 NT_008205 NT_008300 NT_023666 NT_033187 NT_033199
NT_007988 NT_007993 NT_030743 NT_033201 NT_007995 NT_026349 NT_033197 NT_008251
NT_008045 NT_008176 NT_017505 NT_008216 NT_023678 NT_023878 NT_017431 NT_023806
NT_023679 NT_008201 NT_023727 NT_033189 NT_023795 NT_008014 NT_008101 NT_008050
NT_008231 NT_008026 NT_023673 NT_029343 NT_033186 NT_008218 NT_023672 NT_030735
NT_023660 NT_008183 NT_008166 NT_023676 NT_023821 NT_023732 NT_008209 NT_008055
NT_008186 NT_008292 NT_007972 NT_023682 NT_008117 NT_023717 NT_008007 NT_023693
NT_008059 NT_008046 NT_008144 NT_033198 NT_008048 NT_033200 NT_023670 NT_008289
NT_023742 NT_023811 NT_031821 NT_023705 NT_023663 NT_033191 NT_033195 NT_008157
NT_023726 NT_033196 NT_008023 NT_023715 NT_030744 NT_023709 NT_030741 NT_008150
NT_025796 NT_007994 NT_028251 NT_023662 NT_033193 NT_023838 NT_008104 NT_033185
NT_027068 NT_030032 NT_033192 NT_008127 NT_033194 NT_023747 NT_023684 NT_031818


  NT_023726
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023726AC1043171284000171RH1027348474.57    1 AC090192, AC104317
S/G/Y/R/B/O NT_023726AC1043171285459571RH1927  83900.00  1AC090198, AF313041, AC090192, AC090198, AC104317, AF313041
S/G/Y/R/B/O NT_023726AC0901981285587561          
S/G/Y/R/B/O NT_023726AF3130411285662041RH125448477.80    1AC090198, AC090198, AF313041
S/G/Y/R/B/O NT_023726AF3130411285806931RH485648474.57    1 AF313041
S/G/Y/R/B/O NT_023726AF3130411285865401RH990528476.51    1AC090198, AC090198, AF313041
S/G/Y/R/B/O NT_023726AF3130411285965701RH676528476.51    1AC090198, AC090198, AF313041
S/G/Y/R/B/O NT_023726AF3130411285966821RH362258478.40    1AC090198, AC090198, AF313041
S/G/Y/R/B/O NT_023726AF3130411286443011RH625628478.86    1AC090198, AC090198, AF313041
S/G/Y/R/B/O NT_023726AF3130411286443011SGC30260    8638.401AC090198, AC090198, AF313041
S/G/Y/R/B/O NT_023726AC0909221286461703RH8921  83905.00  1AF313041, AF313041
S/G/Y/R/B/O NT_023726AC0909221286464643RH98648477.80    1AC090198, AF313041, AC090198, AC090922, AF295017, AF313041
S/G/Y/R/B/O NT_023726AC0909221286542693RH694808477.80    1AC090198, AF313041, AC090198, AC090922, AF295017, AF313041
S/G/Y/R/B/O NT_023726AC0909221286580393RH153948476.51    1AC090198, AF313041, AC011004, AC090198, AC090922, AC091575, AF295017, AF313041
S/G/Y/R/B/O NT_023726AC0909221286580393RH31076  83896.00  1AC090198, AF313041, AC011004, AC090198, AC090922, AC091575, AF295017, AF313041
S/G/Y/R/B/O NT_023726AC0909221286676343RH674548476.41    1AC090198, AF313041, AC011004, AC090198, AC090922, AC091575, AF295017, AF313041
S/G/Y/R/B/O NT_023726AC0909221286724563RH809908474.09    1AC090198, AF313041, AC011004, AC090198, AC090922, AC091575, AF295017, AF313041
S/G/Y/R/B/O NT_023726AC0909221287041323RH33411  83905.008641.401 AC011004, AC090922, AC091575, AF295017
S/G/Y/R/B/O NT_023726AC0909221287041323RH623828474.30    1 AC011004, AC090922, AC091575, AF295017
S/G/Y/R/B/O NT_023726AC0909221287041323RH685958476.51    1 AC011004, AC090922, AC091575, AF295017
S/G/Y/R/B/O NT_023726AC0909221287279753RH182698474.48    1 AC011004, AC083932, AC090922, AC091575, AF295017
S/G/Y/R/B/O NT_023726AC0909221287736153RH405098476.51    1 AC011004, AC083932, AC090922, AC091575, AF295017
S/G/Y/R/B/O NT_023726AC0909221287786603RH463868471.50    1 AC011004, AC083932, AC090922, AC091575, AF295017
S/G/Y/R/B/O NT_023726AC0909221287799653RH622578471.67    1 AC011004, AC083932, AC090922, AC091575, AF295017
S/G/Y/R/B/O NT_023726AC0909221287799653WI-21130    8631.901 AC011004, AC083932, AC090922, AC091575, AF295017
S/G/Y/R/B/O NT_023726AC0909221287812413RH270238476.51    1 AC011004, AC083932, AC090922, AC091575, AF295017
S/G/Y/R/B/O NT_023726AC0909221288105613RH469868474.57    1 AC011004, AC083932, AC090922, AC091575, AF295017
S/G/Y/R/B/O NT_023726AC1043181289881212CHLC.GATA7G07    8641.401AC087436, AC087436, AC091641, AC104318, AC104716, AF216671
S/G/Y/R/B/O NT_023726AC0874361290112092RH920468474.57    1AC009908, AC009908, AC016451, AC084788, AC087436, AF216671
S/G/Y/R/B/O NT_023726AC0099081290714073WI-5950    8642.701 AC009908, AC016451, AC084788, AC104716, AF216671
S/G/Y/R/B/O NT_023726AC0099081290964993RH254628478.86    1AC087436, AC009908, AC016451, AC084788, AC087436, AF216671
S/G/Y/R/B/O NT_023726AC0099081291022933RH480948474.57    1AC087436, AC009908, AC016451, AC084788, AC087436, AF216671
S/G/Y/R/B/O NT_023726AC0099081291128963RH483898478.86    1 AC009908, AC016451, AC084788, AF216671
S/G/Y/R/B/O NT_023726AC0099081291153233RH158798474.70    1 AC009908, AC016451, AC084788, AF216671
S/G/Y/R/B/O NT_023726AC0099081291175783RH172478476.41    1 AC009908, AC016451, AC084788, AF216671
S/G/Y/R/B/O NT_023726AC0099081291176393RH625708477.80  8641.401 AC009908, AC016451, AC084788, AF216671
S/G/Y/R/B/O NT_023726AC0099081291465373RH471098478.86    1AF267169, AC009908, AC016451, AC084788, AF216671, AF267169
S/G/Y/R/B/O NT_023726AC0099081291683583WI-4273    8641.401AF267169, AC009908, AC016451, AC084788, AF216671, AF267169
S/G/Y/R/B/O NT_023726AF2671691291755551          
S/G/Y/R/B/O NT_023726AC1044311292353331          
S/G/Y/R/B/O NT_023726AC0840831292673611RH362728476.41    1AC104431, AF267169, AC084083, AC104431, AF267169
S/G/Y/R/B/O NT_023726AC0840831292889681RH117048478.86    1AC104431, AF267169, AC084083, AC104431, AF267169
S/G/Y/R/B/O NT_023726AC0840831293456571RH363278476.51    1 AC084083
S/G/Y/R/B/O NT_023726AC0840831302006311RH168428476.51    1AC104431, AC084083, AC104431
S/G/Y/R/B/O NT_023726AF1792961294014192RH625178476.5183933.00  1AC083976, AC084083, AC104319, AC104431, AC083976, AC084083, AC104319, AC104431, AF179296
S/G/Y/R/B/O NT_023726AF1792961294014192SGC33154    8639.701AC083976, AC084083, AC104319, AC104431, AC083976, AC084083, AC104319, AC104431, AF179296
S/G/Y/R/B/O NT_023726AF1792961294014962RH271998478.86    1AC083976, AC084083, AC104319, AC104431, AC083976, AC084083, AC104319, AC104431, AF179296
S/G/Y/R/B/O NT_023726AF1792961294685432RH983628477.80    1AC083976, AC104319, AF295013, AC083976, AC104319, AF179296, AF295013
S/G/Y/R/B/O NT_023726AC0911141295122361CHLC.GATA50B06    8635.201AC083976, AC083976, AC104319, AC083976, AC083976, AC091114, AC104319
S/G/Y/R/B/O NT_023726AC0839761294888361          


  NT_023726 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023726AC1043191294895501          
S/G/Y/R/B/O NT_023726AF2950131294953111          
S/G/Y/R/B/O NT_023726AF2528291295803253WI-5736    8639.701AC083976, AC091114, AC104319, AC019218, AC083976, AC091114, AC091562, AC104319, AF252829
S/G/Y/R/B/O NT_023726AF2528291297192243RH35084  83949.00  1 AC019218, AC091562, AC116547, AF252829
S/G/Y/R/B/O NT_023726AC0160741297850963RH1026948478.25    1 AC016074, AC116547
S/G/Y/R/B/O NT_023726AC0361381299170721          
S/G/Y/R/B/O NT_023726AC0909211299258161          
S/G/Y/R/B/O NT_023726AC0124151301392091RH921388476.51    1 AC012415, AC018402
S/G/Y/R/B/O NT_023726AC0124151301908641RH655548476.51    1 AC012415, AC018402
S/G/Y/R/B/O NT_023726 - RH163018477.80    2AC016405, AC084708, AC104316, AC016405, AC084203, AC084708, AC104316, AC104716
S/G/Y/R/B/O NT_023726 - WI-14759    8642.701AC104316, AC084203, AC104316
S/G/Y/R/B/O NT_023726 - RH163658477.80    2AC016405, AC084708, AC016405, AC084708
S/G/Y/R/B/O NT_023726 - RH254098476.51    0  
S/G/Y/R/B/O NT_023726 - RH404888476.51    2AC090535, AC104316, AF254136, AC084203, AC090535, AC104316, AC104716, AF254136
S/G/Y/R/B/O NT_023726 - RH405688477.80    0AC084083, AC104431, AC084083, AC104431
S/G/Y/R/B/O NT_023726 - RH419008477.80    1AC104316, AC084203, AC104316
S/G/Y/R/B/O NT_023726 - RH471738477.80    1AC104316, AC084203, AC104316
S/G/Y/R/B/O NT_023726 - RH622878478.86    2AC016405, AC084708, AC016405, AC084708
S/G/Y/R/B/O NT_023726 - RH786208478.86    0