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  Chromosome X - RH Maps - Single Contig
 

Chromosome X - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_028427 NT_028413 NT_033330 NT_025302 NT_011735 NT_029505 NT_030875 NT_011649
NT_025291 NT_030874 NT_030885 NT_011812 NT_011832 NT_030887 NT_011775 NT_011772
NT_033338 NT_025352 NT_011724 NT_011586 NT_011754 NT_027220 NT_011694 NT_011662
NT_011530 NT_025960 NT_030890 NT_011535 NT_011536 NT_030191 NT_011753 NT_011766
NT_025940 NT_030873 NT_025323 NT_025318 NT_030889 NT_011752 NT_011757 NT_011657
NT_011793 NT_011692 NT_025348 NT_011568 NT_033332 NT_033319 NT_011611 NT_011638
NT_033329 NT_027215 NT_025961 NT_011836 NT_011799 NT_011618 NT_028400 NT_025297
NT_011630 NT_029503 NT_011669 NT_029502 NT_019696 NT_033336 NT_033321 NT_011594
NT_025273 NT_033334 NT_031924 NT_011544 NT_011597 NT_011689 NT_025320 NT_025329
NT_025376 NT_025312 NT_025306 NT_011687 NT_025949 NT_033327 NT_025330 NT_027217
NT_033328 NT_011651 NT_027218 NT_011765 NT_025280 NT_025319 NT_025299 NT_011819
NT_011783 NT_033326 NT_011565 NT_025265 NT_028405 NT_028406 NT_011588 NT_011667
NT_011613 NT_011786 NT_025267 NT_011834 NT_011719 NT_028403 NT_029504 NT_011574
NT_026503 NT_011681 NT_011851 NT_011537 NT_019686 NT_026504 NT_025309 NT_011602
NT_033323 NT_033335 NT_033325 NT_033322 NT_011598 NT_011726 NT_029507 NT_033333
NT_011637 NT_025345 NT_033324 NT_025965 NT_025307


  NT_011687
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011687AL390840894205733          
S/G/Y/R/B/O NT_011687AL590073896181843          
S/G/Y/R/B/O NT_011687AL357354896989483          
S/G/Y/R/B/O NT_011687AL662819898934603          
S/G/Y/R/B/O NT_011687AL591708899219533          
S/G/Y/R/B/O NT_011687AL357569900136203          
S/G/Y/R/B/O NT_011687AL390966901041423          
S/G/Y/R/B/O NT_011687AL662905902649843          
S/G/Y/R/B/O NT_011687AL450083903622681          
S/G/Y/R/B/O NT_011687AL606663905297623          
S/G/Y/R/B/O NT_011687AL022161905581673          
S/G/Y/R/B/O NT_011687AL591342906956113          
S/G/Y/R/B/O NT_011687AL365400908027273CHLC.GATA69B12    X245.101 AL365400
S/G/Y/R/B/O NT_011687AL157380908782353          
S/G/Y/R/B/O NT_011687AL449189910120143DXS6740    X245.202AL442648, AL442648, AL449189
S/G/Y/R/B/O NT_011687AL137845910914333RH4419717340.46    3AC027801, AL442648, AC027801, AL137845, AL442648
S/G/Y/R/B/O NT_011687AL449188911917133          
S/G/Y/R/B/O NT_011687AL022151911918983          
S/G/Y/R/B/O NT_011687AL031114913267613          
S/G/Y/R/B/O NT_011687AL391865914424043          
S/G/Y/R/B/O NT_011687AL590043916831313WI-3918    X248.201 AL590043
S/G/Y/R/B/O NT_011687AL606530917363943          
S/G/Y/R/B/O NT_011687AL669876918082012          
S/G/Y/R/B/O NT_011687AL645816918535753          
S/G/Y/R/B/O NT_011687Z86061920047673RH70584X272.37    1AC025344, AC025344, Z86061
S/G/Y/R/B/O NT_011687AL645815920134943          
S/G/Y/R/B/O NT_011687AL592157920316893          
S/G/Y/R/B/O NT_011687AL031053920979753          
S/G/Y/R/B/O NT_011687AL139399922685113RH36105X272.37    1 AL139399
S/G/Y/R/B/O NT_011687AL139399923032383RH36249X272.37    1 AL139399
S/G/Y/R/B/O NT_011687AC025344923280691          
S/G/Y/R/B/O NT_011687AL139809923795823RH63362X272.43    1 AL139809
S/G/Y/R/B/O NT_011687AL139809923795823WI-11708    X255.701 AL139809
S/G/Y/R/B/O NT_011687AL139809924106173RH65880X272.43    1 AL139809
S/G/Y/R/B/O NT_011687AL161624924964933          
S/G/Y/R/B/O NT_011687AL391821927029973RH80242X272.12    1 AL391821
S/G/Y/R/B/O NT_011687AL356484927877223          
S/G/Y/R/B/O NT_011687AL590382928054773          
S/G/Y/R/B/O NT_011687AL590116928094823          
S/G/Y/R/B/O NT_011687AL354685929294263          
S/G/Y/R/B/O NT_011687AL391666930844923          
S/G/Y/R/B/O NT_011687AL390997932526813CHLC.GATA29G07    X255.701 AC019074, AL365191, AL390997
S/G/Y/R/B/O NT_011687AL355805933437002          
S/G/Y/R/B/O NT_011687AL357312934963101WI-4699    X254.401 AL139337, AL357312
S/G/Y/R/B/O NT_011687AL357312935091191RH68813X272.37    1 AL139337, AL357312
S/G/Y/R/B/O NT_011687AL360173936036763          
S/G/Y/R/B/O NT_011687AL590243937065993          
S/G/Y/R/B/O NT_011687Z84720937892903RH807252587.90    5AC017071, AC023331, AC073325, AC083803, AL442647, AC017071, AC023331, AC073325, AC083803, AL442647, Z84720
S/G/Y/R/B/O NT_011687AL157778938768573          
S/G/Y/R/B/O NT_011687AL590367940175143          


  NT_011687 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011687AL031012940907713          
S/G/Y/R/B/O NT_011687AC024716942217591          
S/G/Y/R/B/O NT_011687AC079592942322581          
S/G/Y/R/B/O NT_011687AL109733942876013          
S/G/Y/R/B/O NT_011687AL109835944034643          
S/G/Y/R/B/O NT_011687AL109750944961743RH7575X271.18  X249.801 AL109750, AL590310
S/G/Y/R/B/O NT_011687AL022148945633123          
S/G/Y/R/B/O NT_011687AL606759946612793          
S/G/Y/R/B/O NT_011687AL590293946893613          
S/G/Y/R/B/O NT_011687AL137843947552753          
S/G/Y/R/B/O NT_011687AL358953948885773          
S/G/Y/R/B/O NT_011687AL390027950415303WI-3354    X251.601AC024716, AC021855, AC024716, AL390027, AL390297
S/G/Y/R/B/O NT_011687AL590012950953243          
S/G/Y/R/B/O NT_011687AL359641953697573AFMA113WC9    X251.301 AL359641
S/G/Y/R/B/O NT_011687AL355593954242703RH63569X272.37  X249.801 AL355593
S/G/Y/R/B/O NT_011687AL355593954275573RH63621X272.33  X250.701 AL355593
S/G/Y/R/B/O NT_011687AL355593954286473RH10112X270.17    1 AL355593
S/G/Y/R/B/O NT_011687AL590412955449943          
S/G/Y/R/B/O NT_011687Z93928955614043          
S/G/Y/R/B/O NT_011687AL035608957616543RH63336X272.95  X251.701 AL035608, AL390040
S/G/Y/R/B/O NT_011687AL035608957746143AFM310YA5    X251.201 AL035608, AL390040
S/G/Y/R/B/O NT_011687AL391688958071183RH7944  X3261.00  1 AL390040, AL391688
S/G/Y/R/B/O NT_011687Z73900958307853          
S/G/Y/R/B/O NT_011687AL391689958677393          
S/G/Y/R/B/O NT_011687Z95327959351923RH38216  X3249.00  1AC016729, AP004074, AC016729, AC087350, AC087350, AP004074
S/G/Y/R/B/O NT_011687Z83819959733283RH8733  X3249.00  1 Z83819
S/G/Y/R/B/O NT_011687Z73417960460813RH44986X272.75    1 Z73417
S/G/Y/R/B/O NT_011687Z73417960676923RH29966  X3233.00  1 Z73417
S/G/Y/R/B/O NT_011687Z73417960723383RH93061X272.95    1 Z73417
S/G/Y/R/B/O NT_011687Z97985961143723WI-4362    X251.201 Z97985
S/G/Y/R/B/O NT_011687Z97985961420153RH102886X271.91    1 Z97985
S/G/Y/R/B/O NT_011687AL133275961556713          
S/G/Y/R/B/O NT_011687AL109952962284593RH63435X272.95  X251.701 AL109952
S/G/Y/R/B/O NT_011687AL109963962960023RH98560X271.91    1 AL109963
S/G/Y/R/B/O NT_011687Z70280963186063          
S/G/Y/R/B/O NT_011687Z70282963557013          
S/G/Y/R/B/O NT_011687AL022155963568473          
S/G/Y/R/B/O NT_011687Z70281963571833          
S/G/Y/R/B/O NT_011687Z68331963957983RH44293X272.95    1 Z68331
S/G/Y/R/B/O NT_011687Z68331964010103RH92089X272.75    1 Z68331
S/G/Y/R/B/O NT_011687 - RH18141X270.17    0 AC044868
S/G/Y/R/B/O NT_011687 - RH33741  X3165.00  1Z83850, AC026977, Z83850
S/G/Y/R/B/O NT_011687 - RH44153X272.95    0  
S/G/Y/R/B/O NT_011687 - RH63520X272.75    1AL354653, AL354653
S/G/Y/R/B/O NT_011687 - RH91671X271.60    1