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  Chromosome X - RH Maps - Single Contig
 

Chromosome X - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_028427 NT_028413 NT_033330 NT_025302 NT_011735 NT_029505 NT_030875 NT_011649
NT_025291 NT_030874 NT_030885 NT_011812 NT_011832 NT_030887 NT_011775 NT_011772
NT_033338 NT_025352 NT_011724 NT_011586 NT_011754 NT_027220 NT_011694 NT_011662
NT_011530 NT_025960 NT_030890 NT_011535 NT_011536 NT_030191 NT_011753 NT_011766
NT_025940 NT_030873 NT_025323 NT_025318 NT_030889 NT_011752 NT_011757 NT_011657
NT_011793 NT_011692 NT_025348 NT_011568 NT_033332 NT_033319 NT_011611 NT_011638
NT_033329 NT_027215 NT_025961 NT_011836 NT_011799 NT_011618 NT_028400 NT_025297
NT_011630 NT_029503 NT_011669 NT_029502 NT_019696 NT_033336 NT_033321 NT_011594
NT_025273 NT_033334 NT_031924 NT_011544 NT_011597 NT_011689 NT_025320 NT_025329
NT_025376 NT_025312 NT_025306 NT_011687 NT_025949 NT_033327 NT_025330 NT_027217
NT_033328 NT_011651 NT_027218 NT_011765 NT_025280 NT_025319 NT_025299 NT_011819
NT_011783 NT_033326 NT_011565 NT_025265 NT_028405 NT_028406 NT_011588 NT_011667
NT_011613 NT_011786 NT_025267 NT_011834 NT_011719 NT_028403 NT_029504 NT_011574
NT_026503 NT_011681 NT_011851 NT_011537 NT_019686 NT_026504 NT_025309 NT_011602
NT_033323 NT_033335 NT_033325 NT_033322 NT_011598 NT_011726 NT_029507 NT_033333
NT_011637 NT_025345 NT_033324 NT_025965 NT_025307


  NT_011657
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011657AL627091340655703          
S/G/Y/R/B/O NT_011657AL356858342200073RH36419X113.33    1 AL356858
S/G/Y/R/B/O NT_011657AJ239329342222353          
S/G/Y/R/B/O NT_011657AL627244343287393          
S/G/Y/R/B/O NT_011657AL121577344948933RH35775X112.80    1 AL121577
S/G/Y/R/B/O NT_011657AL627245345738293RH63238X112.80X791.00X33.301 AL627245
S/G/Y/R/B/O NT_011657AL121578348915163RH98374X112.80    1 AL121578
S/G/Y/R/B/O NT_011657AL121578349122523RH38019  X780.00  1 AL121578
S/G/Y/R/B/O NT_011657AL121578349122533RH63480X112.80  X33.301 AL121578
S/G/Y/R/B/O NT_011657AL121578349124453RH98278X113.33    1 AL121578
S/G/Y/R/B/O NT_011657AL627246349336913          
S/G/Y/R/B/O NT_011657AL133494349396573          
S/G/Y/R/B/O NT_011657AL606748350322873RH70678X113.33    1 AJ318463, AL606748, AL627412, X94768
S/G/Y/R/B/O NT_011657AL606748350323043RH66572X112.80    1 AJ318463, AL606748, AL627412, X94768
S/G/Y/R/B/O NT_011657AL606748350404583RH76069X113.43    1 AJ318463, AL606748, AL627412, X94767
S/G/Y/R/B/O NT_011657AL606748351155003RH74639  X802.00  1AL607040, AL606748, AL607040, AL627412
S/G/Y/R/B/O NT_011657AL607040351171473          
S/G/Y/R/B/O NT_011657AF241726351839603RH102977X114.92    1 AF241726
S/G/Y/R/B/O NT_011657AF241726351839913RH63239X114.92  X35.101 AF241726
S/G/Y/R/B/O NT_011657AF241727354349753RH46534X112.80    1 AF241727
S/G/Y/R/B/O NT_011657AF241727354508463RH63445X115.67    1AF241728, AF241727, AF241728
S/G/Y/R/B/O NT_011657AF241727354508463WI-7235    X41.801AF241728, AF241727, AF241728
S/G/Y/R/B/O NT_011657AF241727354513583RH17362X116.74    1AF241728, AF241727, AF241728
S/G/Y/R/B/O NT_011657AF241727354514163RH68281X116.74    1AF241728, AF241727, AF241728
S/G/Y/R/B/O NT_011657AF241728355471313WI-2903    X40.201 AC022212, AF241728
S/G/Y/R/B/O NT_011657AF241729355841923          
S/G/Y/R/B/O NT_011657AF241730358116443RH42333X117.66  X37.801AF241731, AF241730, AF241731
S/G/Y/R/B/O NT_011657AF241730358116443RH368  X840.00  1AF241731, AF241730, AF241731
S/G/Y/R/B/O NT_011657AF241731358223123          
S/G/Y/R/B/O NT_011657AF241732358451713          
S/G/Y/R/B/O NT_011657AF241733358620483          
S/G/Y/R/B/O NT_011657AC108879360698103RH69082X124.36    1AC091808, AC091808, AC108879, AC108879
S/G/Y/R/B/O NT_011657AC091808361110863          
S/G/Y/R/B/O NT_011657AC108880362359823          
S/G/Y/R/B/O NT_011657AC108881363425353          
S/G/Y/R/B/O NT_011657AF241734364413673          
S/G/Y/R/B/O NT_011657AC091810365001233RH7552X121.12  X40.001 AF241735
S/G/Y/R/B/O NT_011657AC091810365393213RH75109X125.07    1 AC013798, AC091810, AC115573
S/G/Y/R/B/O NT_011657AL592164365696513          
S/G/Y/R/B/O NT_011657AC092198367538503RH31525  X742.00  1 AC092198, AL590292
S/G/Y/R/B/O NT_011657AC092198368152633RH101975X121.02    1AL591802, AC092198, AL591802
S/G/Y/R/B/O NT_011657AL591802368636913RH91894X121.02    1 AC091809, AL591802
S/G/Y/R/B/O NT_011657AL591802368753263RH36923X117.87    1 AC091809, AL591802
S/G/Y/R/B/O NT_011657AL591802369623523RH63295X122.93  X39.102AC091806, AC104342, AC091806, AC091809, AC104342, AL591802
S/G/Y/R/B/O NT_011657AC091806369851633          
S/G/Y/R/B/O NT_011657AC091807371398453AFMB301YD5    X53.102AC027551, AC069362, AC027551, AC069362, AC091807, AL592165
S/G/Y/R/B/O NT_011657AC092473373703773RH14995  X680.00X38.301 AC026156, AC092473
S/G/Y/R/B/O NT_011657AC092473373706693RH35743X121.02    1 AC026156, AC092473
S/G/Y/R/B/O NT_011657AC092473373857303RH4567615146.69    2AC012652, AC090439, AC093029, AC104801, AC012652, AC023925, AC026156, AC090439, AC092473, AC093029, AC104801
S/G/Y/R/B/O NT_011657AC092473373878933RH102415X125.18    1AC093029, AC026156, AC092473, AC093029


  NT_011657 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011657AC093029374129201RH26895X122.03    1 AC093029
S/G/Y/R/B/O NT_011657 - RH28496X115.78    0  
S/G/Y/R/B/O NT_011657 - RH1146  X661.00  1AL109797, AL109797
S/G/Y/R/B/O NT_011657 - RH35735X113.43    4AC023001, AC055120, AC107059, AC107391, AC110373, Z73986, AC023001, AC055120, AC107059, AC107391, AC110373, AL672207, X78211, X78713, X78714, Z73986
S/G/Y/R/B/O NT_011657 - RH31523  X527.00  1 AC006924, AC041003
S/G/Y/R/B/O NT_011657 - RH47975X114.44    0  
S/G/Y/R/B/O NT_011657 - RH33335  X623.00  1AL391259, AC006121, AL356864, AL391259
S/G/Y/R/B/O NT_011657 - RH48050X114.82    1AL034412, AL034412, Z69732
S/G/Y/R/B/O NT_011657 - RH37821  X641.00  1AL627402, AL161458, AL627402
S/G/Y/R/B/O NT_011657 - RH399  X603.00  1Z93403, Z93403
S/G/Y/R/B/O NT_011657 - RH63474X120.92  X39.900  
S/G/Y/R/B/O NT_011657 - RH67827X113.64    1AL139811, AL139811
S/G/Y/R/B/O NT_011657 - RH75486X119.82    0  
S/G/Y/R/B/O NT_011657 - RH76094X116.53    1AL020990, AL020990, X60819
S/G/Y/R/B/O NT_011657 - RH78149X117.87    0