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  Chromosome X - RH Maps - Single Contig
 

Chromosome X - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_028427 NT_028413 NT_033330 NT_025302 NT_011735 NT_029505 NT_030875 NT_011649
NT_025291 NT_030874 NT_030885 NT_011812 NT_011832 NT_030887 NT_011775 NT_011772
NT_033338 NT_025352 NT_011724 NT_011586 NT_011754 NT_027220 NT_011694 NT_011662
NT_011530 NT_025960 NT_030890 NT_011535 NT_011536 NT_030191 NT_011753 NT_011766
NT_025940 NT_030873 NT_025323 NT_025318 NT_030889 NT_011752 NT_011757 NT_011657
NT_011793 NT_011692 NT_025348 NT_011568 NT_033332 NT_033319 NT_011611 NT_011638
NT_033329 NT_027215 NT_025961 NT_011836 NT_011799 NT_011618 NT_028400 NT_025297
NT_011630 NT_029503 NT_011669 NT_029502 NT_019696 NT_033336 NT_033321 NT_011594
NT_025273 NT_033334 NT_031924 NT_011544 NT_011597 NT_011689 NT_025320 NT_025329
NT_025376 NT_025312 NT_025306 NT_011687 NT_025949 NT_033327 NT_025330 NT_027217
NT_033328 NT_011651 NT_027218 NT_011765 NT_025280 NT_025319 NT_025299 NT_011819
NT_011783 NT_033326 NT_011565 NT_025265 NT_028405 NT_028406 NT_011588 NT_011667
NT_011613 NT_011786 NT_025267 NT_011834 NT_011719 NT_028403 NT_029504 NT_011574
NT_026503 NT_011681 NT_011851 NT_011537 NT_019686 NT_026504 NT_025309 NT_011602
NT_033323 NT_033335 NT_033325 NT_033322 NT_011598 NT_011726 NT_029507 NT_033333
NT_011637 NT_025345 NT_033324 NT_025965 NT_025307


  NT_028406
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_028406AL5901561121935273          
S/G/Y/R/B/O NT_028406AC0020711122004103          
S/G/Y/R/B/O NT_028406AL5901571122640363          
S/G/Y/R/B/O NT_028406AC0048231122685133          
S/G/Y/R/B/O NT_028406AC0050021124441673CHLC.GATA48H04    X259.001 AC005002
S/G/Y/R/B/O NT_028406AC0050021124547493RH49128X294.59X3513.00  1 AC005002
S/G/Y/R/B/O NT_028406AC0049591125040273          
S/G/Y/R/B/O NT_028406AC0063951125700943          
S/G/Y/R/B/O NT_028406AL5915051126421853          
S/G/Y/R/B/O NT_028406AL0310741126607793          
S/G/Y/R/B/O NT_028406AC0069751127598833          
S/G/Y/R/B/O NT_028406AC0080591128905363          
S/G/Y/R/B/O NT_028406AL4452461129148403          
S/G/Y/R/B/O NT_028406AC0069631129298183          
S/G/Y/R/B/O NT_028406AC0069681130179333          
S/G/Y/R/B/O NT_028406AL5901141131140133          
S/G/Y/R/B/O NT_028406AC0030121132001533RH35776X295.67    1 AC003012, AC083896, X02344
S/G/Y/R/B/O NT_028406AC0070881132424323          
S/G/Y/R/B/O NT_028406AL3913581132645273          
S/G/Y/R/B/O NT_028406AL3914741133687363          
S/G/Y/R/B/O NT_028406AL3918301134176543          
S/G/Y/R/B/O NT_028406AL3918031134323933RH38794X295.26    1 AC068828, AL391803
S/G/Y/R/B/O NT_028406AL3918031134324503RH74948X295.05    1 AC068828, AL391803
S/G/Y/R/B/O NT_028406AL3918031135140803RH68593X295.26    1 AL391803
S/G/Y/R/B/O NT_028406AL3918031135242053RH63334X295.26  X274.201 AL391803
S/G/Y/R/B/O NT_028406AL3918031135242053RH32616  X4106.00  1 AL391803
S/G/Y/R/B/O NT_028406AC0070211135355993          
S/G/Y/R/B/O NT_028406AL3912371136581733          
S/G/Y/R/B/O NT_028406AL3912801137568253RH102301X296.48    1 AL391280
S/G/Y/R/B/O NT_028406AL3912801138449203RH47729X296.48    1 AL391280, AL606485
S/G/Y/R/B/O NT_028406AL3912801138629133RH93401X296.48    1 AL391280, AL606485
S/G/Y/R/B/O NT_028406AL3912801138640373RH27055X296.48    1 AL391280, AL606485
S/G/Y/R/B/O NT_028406AL3912801138645733RH63466X296.48  X274.301 AL606485
S/G/Y/R/B/O NT_028406AL3912801138645733RH33242  X4107.00  1 AL606485
S/G/Y/R/B/O NT_028406AL3912801138645733RH17875X296.48    1 AL391280, AL606485
S/G/Y/R/B/O NT_028406AL3912801138654083RH16715X296.48    1 AL391280, AL606485
S/G/Y/R/B/O NT_028406AL3912801138656643RH102960X296.48    1 AL391280, AL606485
S/G/Y/R/B/O NT_028406AL5898241138697213          
S/G/Y/R/B/O NT_028406AC0069651138978043RH63548X295.67  X274.101AC055806, AC006965, AC055806, AL606485
S/G/Y/R/B/O NT_028406AC0069651138978963RH81071X296.27    1AC055806, AC006965, AC055806, AL606485
S/G/Y/R/B/O NT_028406AC0558061140072081          
S/G/Y/R/B/O NT_028406AC0205821141194271RH70176X296.06    1 AC020582
S/G/Y/R/B/O NT_028406AC0205821141226321RH36504X296.48    1 AC020582
S/G/Y/R/B/O NT_028406 - RH102997X295.05    1Z75746, Z75746
S/G/Y/R/B/O NT_028406 - RH1009  X3368.00  1AL031388, AL031388
S/G/Y/R/B/O NT_028406 - RH103718X294.21    1Z74477, Z74477
S/G/Y/R/B/O NT_028406 - RH14270  X3368.00  1AL049563, AL049563
S/G/Y/R/B/O NT_028406 - RH104228X293.07    1AL035425, AL035425
S/G/Y/R/B/O NT_028406 - RH29998  X3387.00  1AL078580, AL078580
S/G/Y/R/B/O NT_028406 - RH12108X292.97    1AL031387, AL031387, AL161914


  NT_028406 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_028406 - RH25806X293.07    1AL158821, AL158821
S/G/Y/R/B/O NT_028406 - RH36508X293.07    0AL031177, AL031177
S/G/Y/R/B/O NT_028406 - RH38771X293.01    0  
S/G/Y/R/B/O NT_028406 - RH41913X292.97    1AL359079, AL359079
S/G/Y/R/B/O NT_028406 - RH44300X293.07    1AL390039, AC023366, AL390039
S/G/Y/R/B/O NT_028406 - RH45245X293.07    1AL035425, AL035425
S/G/Y/R/B/O NT_028406 - RH45630X293.07    1AL390039, AC023366, AL390039
S/G/Y/R/B/O NT_028406 - RH45776X295.05    1Z75895, Z75895
S/G/Y/R/B/O NT_028406 - RH46895X292.97    1AL031319, AL031319
S/G/Y/R/B/O NT_028406 - RH47107X292.97    1AL049563, AL049563
S/G/Y/R/B/O NT_028406 - RH48787X295.46    1Z69304, Z69304
S/G/Y/R/B/O NT_028406 - RH63271X293.01    1AL031177, AL031177
S/G/Y/R/B/O NT_028406 - RH63347X294.21    1Z83850, AC026977, Z83850
S/G/Y/R/B/O NT_028406 - RH63371X293.07    1AL035425, AL035425
S/G/Y/R/B/O NT_028406 - RH63494X295.05    1AL008708, AL008708
S/G/Y/R/B/O NT_028406 - RH63558X293.07    1AL591849, AL591849
S/G/Y/R/B/O NT_028406 - RH63599X295.05    1Z95624, AL008882, Z95624
S/G/Y/R/B/O NT_028406 - RH63610X293.01    1AL034399, AL034399, AL606665
S/G/Y/R/B/O NT_028406 - RH65720X295.46    1AL035422, AL035422
S/G/Y/R/B/O NT_028406 - RH80484X292.97    1AL031319, AL031319
S/G/Y/R/B/O NT_028406 - RH91104X296.48    0  
S/G/Y/R/B/O NT_028406 - RH93084X295.05    1Z68871, AL008882, Z68871