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  Chromosome X - RH Maps - Single Contig
 

Chromosome X - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_028427 NT_028413 NT_033330 NT_025302 NT_011735 NT_029505 NT_030875 NT_011649
NT_025291 NT_030874 NT_030885 NT_011812 NT_011832 NT_030887 NT_011775 NT_011772
NT_033338 NT_025352 NT_011724 NT_011586 NT_011754 NT_027220 NT_011694 NT_011662
NT_011530 NT_025960 NT_030890 NT_011535 NT_011536 NT_030191 NT_011753 NT_011766
NT_025940 NT_030873 NT_025323 NT_025318 NT_030889 NT_011752 NT_011757 NT_011657
NT_011793 NT_011692 NT_025348 NT_011568 NT_033332 NT_033319 NT_011611 NT_011638
NT_033329 NT_027215 NT_025961 NT_011836 NT_011799 NT_011618 NT_028400 NT_025297
NT_011630 NT_029503 NT_011669 NT_029502 NT_019696 NT_033336 NT_033321 NT_011594
NT_025273 NT_033334 NT_031924 NT_011544 NT_011597 NT_011689 NT_025320 NT_025329
NT_025376 NT_025312 NT_025306 NT_011687 NT_025949 NT_033327 NT_025330 NT_027217
NT_033328 NT_011651 NT_027218 NT_011765 NT_025280 NT_025319 NT_025299 NT_011819
NT_011783 NT_033326 NT_011565 NT_025265 NT_028405 NT_028406 NT_011588 NT_011667
NT_011613 NT_011786 NT_025267 NT_011834 NT_011719 NT_028403 NT_029504 NT_011574
NT_026503 NT_011681 NT_011851 NT_011537 NT_019686 NT_026504 NT_025309 NT_011602
NT_033323 NT_033335 NT_033325 NT_033322 NT_011598 NT_011726 NT_029507 NT_033333
NT_011637 NT_025345 NT_033324 NT_025965 NT_025307


  NT_011669
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011669AC021213579242401          
S/G/Y/R/B/O NT_011669AL359854579285613          
S/G/Y/R/B/O NT_011669AL365179580921343          
S/G/Y/R/B/O NT_011669AL158203583732613RH63642X206.11  X146.601 AL158203
S/G/Y/R/B/O NT_011669AL596126584354863          
S/G/Y/R/B/O NT_011669AL391277585815492AFMB324ZC5    X129.101 AL391277
S/G/Y/R/B/O NT_011669AL391277585816762WI-6707    X145.401 AL391277
S/G/Y/R/B/O NT_011669AC017106586398401          
S/G/Y/R/B/O NT_011669AC023993586451761          
S/G/Y/R/B/O NT_011669AL355142586634273          
S/G/Y/R/B/O NT_011669AL451106587200023          
S/G/Y/R/B/O NT_011669AL354737588467393          
S/G/Y/R/B/O NT_011669AL356003590196303          
S/G/Y/R/B/O NT_011669AL355852590837403WI-9877    X132.301 AL355852
S/G/Y/R/B/O NT_011669AL356317592046223RH41896X206.42    1 AL356317
S/G/Y/R/B/O NT_011669AL356317592423183RH78735X206.89    1 AL356317
S/G/Y/R/B/O NT_011669AL356317592423413RH38741X208.91    1 AL356317
S/G/Y/R/B/O NT_011669AL034408592994073          
S/G/Y/R/B/O NT_011669AL589881594291563          
S/G/Y/R/B/O NT_011669AL356265596052813RH63659X212.15  X139.401AC023993, AC023993, AL356265
S/G/Y/R/B/O NT_011669AL353744596689683RH752425570.45    2AC012613, AC012613, AC025975, AL353744
S/G/Y/R/B/O NT_011669AL590813597747563          
S/G/Y/R/B/O NT_011669AL591765598502203          
S/G/Y/R/B/O NT_011669AL355606598819543RH63631X213.18  X145.201 AL355606
S/G/Y/R/B/O NT_011669AL355606598968353RH67283X212.65    1 AL355606
S/G/Y/R/B/O NT_011669AL591202600185553          
S/G/Y/R/B/O NT_011669AL445523601093723          
S/G/Y/R/B/O NT_011669AL441964602653183          
S/G/Y/R/B/O NT_011669Z83841604157753CHLC.GATA72E05    X136.901 Z83841
S/G/Y/R/B/O NT_011669Z83841604158193CHLC.GATA112B03    X145.501 Z83841
S/G/Y/R/B/O NT_011669AL050306604879073RH63412X211.81X1791.00X137.001 AL050306
S/G/Y/R/B/O NT_011669AL050306604880923RH12487X211.81    1 AL050306
S/G/Y/R/B/O NT_011669AL050306604881563RH66973X214.49    1 AL050306
S/G/Y/R/B/O NT_011669AL050306604930873RH102799X213.74    1 AL050306
S/G/Y/R/B/O NT_011669AL391690605492483          
S/G/Y/R/B/O NT_011669Z98946607218293RH63290X213.18  X146.401 AL354652, AL445261, Z98946
S/G/Y/R/B/O NT_011669AL391691607374063          
S/G/Y/R/B/O NT_011669AL591595607491503          
S/G/Y/R/B/O NT_011669AL450487607642613          
S/G/Y/R/B/O NT_011669AL034397610021073RH35777X217.93    1 AL034397, AL355972
S/G/Y/R/B/O NT_011669AL034397610021323RH25447X217.93    1 AL034397, AL355972
S/G/Y/R/B/O NT_011669AL034397610231683RH42447X220.46  X139.401 AL034397
S/G/Y/R/B/O NT_011669AL139276610345723          
S/G/Y/R/B/O NT_011669AL030998611804633RH7565X212.68  X147.201 AL030998
S/G/Y/R/B/O NT_011669AL030998611804633RH29858  X1764.00  1 AL030998
S/G/Y/R/B/O NT_011669AL157698612474143RH99071X212.99    1 AC020739, AL157698, AL356367
S/G/Y/R/B/O NT_011669AL592049613757383          
S/G/Y/R/B/O NT_011669AL353136615960563WI-4831    X143.301AC023560, AC023560, AL353136
S/G/Y/R/B/O NT_011669AL353575616685963          
S/G/Y/R/B/O NT_011669AL355381617371771          


  NT_011669 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011669AL590375618738313          
S/G/Y/R/B/O NT_011669AL139279619370553          
S/G/Y/R/B/O NT_011669AL513163620358633          
S/G/Y/R/B/O NT_011669AL590224621475493          
S/G/Y/R/B/O NT_011669AC068174622338451          
S/G/Y/R/B/O NT_011669AC023560622623931          
S/G/Y/R/B/O NT_011669AL670463622843623          
S/G/Y/R/B/O NT_011669AL590117623147873          
S/G/Y/R/B/O NT_011669AL049641623708523          
S/G/Y/R/B/O NT_011669AL049564625777423RH63250X206.18  X152.101 AL049564, X78592
S/G/Y/R/B/O NT_011669AL158016626130523          
S/G/Y/R/B/O NT_011669AL356358627648331RH69110X227.47    1 AL356358
S/G/Y/R/B/O NT_011669AL356358627668951RH38732X227.57    1 AL356358
S/G/Y/R/B/O NT_011669AL356358627669011RH7846  X1776.00  1 AL356358
S/G/Y/R/B/O NT_011669AL356358627726561RH75291X238.28    1 AL356358
S/G/Y/R/B/O NT_011669AL356358627726891WI-20403    X154.501 AL356358
S/G/Y/R/B/O NT_011669AL356358627726891RH63340X243.16    1 AL356358
S/G/Y/R/B/O NT_011669AL356358627733661RH99038X226.22    1 AL356358
S/G/Y/R/B/O NT_011669 - RH25058X226.53    0  
S/G/Y/R/B/O NT_011669 - RH26375X211.12    0