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  Chromosome 3 - RH Maps - Single Contig
 

Chromosome 3 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_005927 NT_029265 NT_028123 NT_006044 NT_022517 NT_005507 NT_022516 NT_005564
NT_005762 NT_005646 NT_028139 NT_033044 NT_005502 NT_022539 NT_022464 NT_005580
NT_033049 NT_005498 NT_006036 NT_005825 NT_029949 NT_005991 NT_005585 NT_022567
NT_028129 NT_005990 NT_030623 NT_022439 NT_006014 NT_033032 NT_005986 NT_033015
NT_033038 NT_022552 NT_005787 NT_033040 NT_022481 NT_005607 NT_033026 NT_005999
NT_005531 NT_022473 NT_022423 NT_005510 NT_022510 NT_022665 NT_028127 NT_022400
NT_005530 NT_029258 NT_022442 NT_005769 NT_005526 NT_022540 NT_022717 NT_005644
NT_022446 NT_005583 NT_033034 NT_005882 NT_033036 NT_022419 NT_006031 NT_022551
NT_022459 NT_033029 NT_022713 NT_022460 NT_033011 NT_022554 NT_022720 NT_005684
NT_005663 NT_033018 NT_022420 NT_033043 NT_022642 NT_005791 NT_022452 NT_022435
NT_033028 NT_022497 NT_022625 NT_005568 NT_022401 NT_033031 NT_026983 NT_022475
NT_033037 NT_022451 NT_005509 NT_005527 NT_033050 NT_030634 NT_033041 NT_005863
NT_022454 NT_022607 NT_022453 NT_025670 NT_030622 NT_033045 NT_022728 NT_031768
NT_019350 NT_022434 NT_029256 NT_022405 NT_022569 NT_006042 NT_022484 NT_005795
NT_015150 NT_022445 NT_030625 NT_005532 NT_029269 NT_022455 NT_029931 NT_033022
NT_029257 NT_005513 NT_005994 NT_030635 NT_022411 NT_005824 NT_033021 NT_005543
NT_005588 NT_006029 NT_022513 NT_005523 NT_033014 NT_006025 NT_022404 NT_005823
NT_033019 NT_022393 NT_025663 NT_005567 NT_030630 NT_005969 NT_033051 NT_025664
NT_005655 NT_022503 NT_022632 NT_033024 NT_022416 NT_022432 NT_033020 NT_033035
NT_033042 NT_005832 NT_022502 NT_005772 NT_019358 NT_005591 NT_005775 NT_022616
NT_005540 NT_029939 NT_005616 NT_005539 NT_022555 NT_005849 NT_005657 NT_005678
NT_005846 NT_005612 NT_033030 NT_022463 NT_022594 NT_022449 NT_022421 NT_005744
NT_022565 NT_022518 NT_005638 NT_022397 NT_022700 NT_022422 NT_025667 NT_033052
NT_022472 NT_033033 NT_022526 NT_022674 NT_022458 NT_022509 NT_005635 NT_033053
NT_005950 NT_022396 NT_005952 NT_022406 NT_022676 NT_029253 NT_030638 NT_005910
NT_022549 NT_033009 NT_005911 NT_005962 NT_031766 NT_005883 NT_005501 NT_005571
NT_033017 NT_033013 NT_029928 NT_033010 NT_005834 NT_005535 NT_033012 NT_033016
NT_022508


  NT_005863
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005863AC0097611046604871          
S/G/Y/R/B/O NT_005863AC0841981046711661RH588763359.10    1AC009761, AC009761, AC084198
S/G/Y/R/B/O NT_005863AC0841981046711661SGC35068    3445.401AC009761, AC009761, AC084198
S/G/Y/R/B/O NT_005863AC0841981047420131RH359343359.99    1AC023071, AC021467, AC023071, AC084198
S/G/Y/R/B/O NT_005863AC0841981047420641RH585493353.95  3429.701AC023071, AC021467, AC023071, AC084198
S/G/Y/R/B/O NT_005863AC0841981047986401RH586943353.20  3421.501 AB061828, AC084198
S/G/Y/R/B/O NT_005863AC0841981048086041RH679803349.35    1AC009761, AC009761, AC084198
S/G/Y/R/B/O NT_005863AC0841981048301021RH584643356.61  3421.801AC009761, AC009761, AC084198
S/G/Y/R/B/O NT_005863AC0841981048473851RH764525378.80    5AC004025, AC009634, AC009761, AC010260, AC012636, AC026920, AC098476, AC104641, AC113561, AC004025, AC009634, AC009761, AC010260, AC012636, AC012659, AC026920, AC084198, AC098476, AC104641, AC113561, AF311104, AJ297357
S/G/Y/R/B/O NT_005863AC0738611049695451RH806303357.67    1AC009761, AC009761, AC073861
S/G/Y/R/B/O NT_005863AC0738611049696061RH669983349.45    1AC009761, AC009761, AC073861
S/G/Y/R/B/O NT_005863AC0738611049961761RH33674  34981.00  1AC009761, AC009761, AC073861
S/G/Y/R/B/O NT_005863AC0738611049961891RH415163349.55    1AC009761, AC009761, AC073861
S/G/Y/R/B/O NT_005863AC0095811048724141          
S/G/Y/R/B/O NT_005863AC1109941048921991          
S/G/Y/R/B/O NT_005863AC0230711050540161          
S/G/Y/R/B/O NT_005863AC0206511050651243RH587753351.76  3422.201AC023071, AC084198, AC020651, AC021467, AC023071, AC084198
S/G/Y/R/B/O NT_005863AC0206511050834993RH658453359.88    1AC023071, AC020651, AC021467, AC023071
S/G/Y/R/B/O NT_005863AC0206511050878053RH464923359.99    1AC023071, AC020651, AC021467, AC023071
S/G/Y/R/B/O NT_005863AC0206511050893503RH587883359.4434992.003432.701AC023071, AC020651, AC021467, AC023071
S/G/Y/R/B/O NT_005863AC0206511051216473RH37857  34998.00  1AC023071, AC020651, AC021467, AC023071
S/G/Y/R/B/O NT_005863AC0206511051217163RH916323359.99    1AC023071, AC020651, AC021467, AC023071
S/G/Y/R/B/O NT_005863AC0607621052036421          
S/G/Y/R/B/O NT_005863AC1067121052605971RH30822  34998.00  1AC060762, AC055706, AC060762, AC078780, AC106712
S/G/Y/R/B/O NT_005863AC0682381052891561          
S/G/Y/R/B/O NT_005863AC1121351052953021          
S/G/Y/R/B/O NT_005863AC0223241054281803CHLC.GATA11F06.724    3429.601AC068238, AC112135, AC022324, AC068238, AC093005, AC112135
S/G/Y/R/B/O NT_005863AC0223241055792223RH30823  35003.00  1 AC022324, AC093005
S/G/Y/R/B/O NT_005863AC0687641057079133RH362363357.89    1AC009581, AC023311, AC110994, AC009581, AC023311, AC068764, AC110994
S/G/Y/R/B/O NT_005863AC0687641057173543RH674493349.45    1AC009581, AC023311, AC110994, AC009581, AC023311, AC068764, AC110994
S/G/Y/R/B/O NT_005863AC0687641058157853RH688183347.41    1AC023311, AC027757, AC093008, AC023311, AC027757, AC068764, AC093008
S/G/Y/R/B/O NT_005863AC0687641058183443RH476293351.77    1AC023311, AC027757, AC093008, AC023311, AC027757, AC068764, AC093008
S/G/Y/R/B/O NT_005863AC0233111058281311          
S/G/Y/R/B/O NT_005863AC0930081058473211          
S/G/Y/R/B/O NT_005863AC0277571058494341          
S/G/Y/R/B/O NT_005863 - RH1042173355.55    1AC022883, AC069222, AC022883, AC067824, AC069222
S/G/Y/R/B/O NT_005863 - RH165833357.71    1AC022883, AC069222, AC022883, AC069222
S/G/Y/R/B/O NT_005863 - RH177153355.84    0AC073210, AC073210
S/G/Y/R/B/O NT_005863 - RH271983358.88    1AC015462, AC023782, AC078783, AC093003, AC015462, AC023782, AC078783, AC093003
S/G/Y/R/B/O NT_005863 - RH368423358.66    0  
S/G/Y/R/B/O NT_005863 - RH415593354.03    1AC022912, AC068763, AC069223, AC022912, AC068763, AC069223
S/G/Y/R/B/O NT_005863 - RH419983354.27    1AC024413, AC024433, AC024413, AC024433
S/G/Y/R/B/O NT_005863 - RH459773357.71    1AC022883, AC069222, AC022883, AC067824, AC069222
S/G/Y/R/B/O NT_005863 - RH473533358.55    1AC015462, AC023782, AC078783, AC093003, AC015462, AC023782, AC078783, AC093003
S/G/Y/R/B/O NT_005863 - RH473963358.77    1AC015462, AC023782, AC078783, AC093003, AC015462, AC023782, AC078783, AC093003
S/G/Y/R/B/O NT_005863 - RH581713357.23  3423.400  
S/G/Y/R/B/O NT_005863 - RH583383356.17  3426.101AC027080, AC068763, AC069223, AC027080, AC068763, AC069223, AC093623
S/G/Y/R/B/O NT_005863 - RH586513357.27  3426.201AC015462, AC023782, AC078783, AC093003, AC015462, AC023782, AC078783, AC093003
S/G/Y/R/B/O NT_005863 - D3S1271    3426.301 AC018352
S/G/Y/R/B/O NT_005863 - RH585283357.27  3427.001AC015462, AC023782, AC078783, AC093003, AC015462, AC023782, AC078783, AC093003


  NT_005863 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005863 - WI-4028    3426.601AC015462, AC093003, AC015462, AC093003
S/G/Y/R/B/O NT_005863 - RH588583355.84  3432.801AC080014, AC012280, AC080014
S/G/Y/R/B/O NT_005863 - RH657613357.27    1AC024413, AC024433, AC024413, AC024433
S/G/Y/R/B/O NT_005863 - D3S1603    3434.001AC016962, AC108737, AC016962, AC108737
S/G/Y/R/B/O NT_005863 - RH750103357.89    0  
S/G/Y/R/B/O NT_005863 - WI-1099    3434.901AC080009, AC080009
S/G/Y/R/B/O NT_005863 - RH787693351.47    0AC009761, AC073861, AC009761, AC073861
S/G/Y/R/B/O NT_005863 - RH919743357.67    1AC015462, AC023782, AC078783, AC093003, AC015462, AC023782, AC078783, AC093003
S/G/Y/R/B/O NT_005863 - RH925203353.22    1AC024413, AC024433, AC024413, AC024433
S/G/Y/R/B/O NT_005863 - RH926093353.62    0