Chromosome 3 - RH Maps - Single Contig

Chromosome 3 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_005927	NT_029265	NT_028123	NT_006044	NT_022517	NT_005507	NT_022516	NT_005564
NT_005762	NT_005646	NT_028139	NT_033044	NT_005502	NT_022539	NT_022464	NT_005580
NT_033049	NT_005498	NT_006036	NT_005825	NT_029949	NT_005991	NT_005585	NT_022567
NT_028129	NT_005990	NT_030623	NT_022439	NT_006014	NT_033032	NT_005986	NT_033015
NT_033038	NT_022552	NT_005787	NT_033040	NT_022481	NT_005607	NT_033026	NT_005999
NT_005531	NT_022473	NT_022423	NT_005510	NT_022510	NT_022665	NT_028127	NT_022400
NT_005530	NT_029258	NT_022442	NT_005769	NT_005526	NT_022540	NT_022717	NT_005644
NT_022446	NT_005583	NT_033034	NT_005882	NT_033036	NT_022419	NT_006031	NT_022551
NT_022459	NT_033029	NT_022713	NT_022460	NT_033011	NT_022554	NT_022720	NT_005684
NT_005663	NT_033018	NT_022420	NT_033043	NT_022642	NT_005791	NT_022452	NT_022435
NT_033028	NT_022497	NT_022625	NT_005568	NT_022401	NT_033031	NT_026983	NT_022475
NT_033037	NT_022451	NT_005509	NT_005527	NT_033050	NT_030634	NT_033041	NT_005863
NT_022454	NT_022607	NT_022453	NT_025670	NT_030622	NT_033045	NT_022728	NT_031768
NT_019350	NT_022434	NT_029256	NT_022405	NT_022569	NT_006042	NT_022484	NT_005795
NT_015150	NT_022445	NT_030625	NT_005532	NT_029269	NT_022455	NT_029931	NT_033022
NT_029257	NT_005513	NT_005994	NT_030635	NT_022411	NT_005824	NT_033021	NT_005543
NT_005588	NT_006029	NT_022513	NT_005523	NT_033014	NT_006025	NT_022404	NT_005823
NT_033019	NT_022393	NT_025663	NT_005567	NT_030630	NT_005969	NT_033051	NT_025664
NT_005655	NT_022503	NT_022632	NT_033024	NT_022416	NT_022432	NT_033020	NT_033035
NT_033042	NT_005832	NT_022502	NT_005772	NT_019358	NT_005591	NT_005775	NT_022616
NT_005540	NT_029939	NT_005616	NT_005539	NT_022555	NT_005849	NT_005657	NT_005678
NT_005846	NT_005612	NT_033030	NT_022463	NT_022594	NT_022449	NT_022421	NT_005744
NT_022565	NT_022518	NT_005638	NT_022397	NT_022700	NT_022422	NT_025667	NT_033052
NT_022472	NT_033033	NT_022526	NT_022674	NT_022458	NT_022509	NT_005635	NT_033053
NT_005950	NT_022396	NT_005952	NT_022406	NT_022676	NT_029253	NT_030638	NT_005910
NT_022549	NT_033009	NT_005911	NT_005962	NT_031766	NT_005883	NT_005501	NT_005571
NT_033017	NT_033013	NT_029928	NT_033010	NT_005834	NT_005535	NT_033012	NT_033016
NT_022508

NT_019350

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_019350	AC092267	111128450	1
S/G/Y/R/B/O	NT_019350	AC107022	111131145	1
S/G/Y/R/B/O	NT_019350	AC074043	111171923	3	RH92389	3	377.99			1		AC074043
S/G/Y/R/B/O	NT_019350	AC074043	111307453	3	RH12379	3	377.99			1	AC092267, AC107022,	AC009651, AC074043, AC092267, AC107022
S/G/Y/R/B/O	NT_019350	AC074043	111308468	3	RH102640	3	377.99			1	AC092267, AC107022,	AC009651, AC074043, AC092267, AC107022
S/G/Y/R/B/O	NT_019350	AC074043	111314612	3	RH65921	3	395.29			1	AC092267, AC107022,	AC009651, AC074043, AC092267, AC107022
S/G/Y/R/B/O	NT_019350	AC063944	111323600	3	RH48614	3	377.99			1	AC074043, AC092267, AC107022,	AC009651, AC063944, AC074043, AC092267, AC107022
S/G/Y/R/B/O	NT_019350	AC063944	111331337	3	CHLC.GATA84B12			3	481.10	1	AC092267, AC107022,	AC009651, AC063944, AC092267, AC107022
S/G/Y/R/B/O	NT_019350	AC063944	111490121	3	SGC34297			3	476.60	1		AC063944, AC067831
S/G/Y/R/B/O	NT_019350	AC063944	111490121	3	RH58326	3	393.64			1		AC063944, AC067831
S/G/Y/R/B/O	NT_019350	AC063944	111490121	3	RH41652	3	394.01			1		AC063944, AC067831
S/G/Y/R/B/O	NT_019350	AC068765	111528762	3	RH45343	3	379.61			1		AC026673, AC067831, AC068765
S/G/Y/R/B/O	NT_019350	AC068765	111619848	3	WI-5968			3	461.40	1	AC026876,	AC009893, AC026673, AC026876, AC068765
S/G/Y/R/B/O	NT_019350	AC072044	111720515	1	WI-16426			3	483.40	1	AC026876,	AC009893, AC026876, AC072044
S/G/Y/R/B/O	NT_019350	AC072044	111720515	1	RH58168	3	394.55			1	AC026876,	AC009893, AC026876, AC072044
S/G/Y/R/B/O	NT_019350	AC107299	111833153	3	WI-16360			3	481.00	1	AC025415,	AC025415, AC107299
S/G/Y/R/B/O	NT_019350	AC107299	111833153	3	RH58268	3	395.50			1	AC025415,	AC025415, AC107299
S/G/Y/R/B/O	NT_019350	AC107299	111865879	3	WI-17954			3	475.20	1	AC025415,	AC025415, AC107299
S/G/Y/R/B/O	NT_019350	AC107299	111865879	3	RH58005	3	392.08			1	AC025415,	AC025415, AC107299
S/G/Y/R/B/O	NT_019350	AC107299	111866348	3	RH41591	3	392.84			1	AC025415,	AC025415, AC107299
S/G/Y/R/B/O	NT_019350	AC107299	111870209	3	WI-14260			3	483.40	1	AC025415,	AC025415, AC107299
S/G/Y/R/B/O	NT_019350	AC107299	111870209	3	RH58601	3	395.94			1	AC025415,	AC025415, AC107299
S/G/Y/R/B/O	NT_019350	AC025415	111898597	1
S/G/Y/R/B/O	NT_019350	AC026876	111898698	1
S/G/Y/R/B/O	NT_019350		-		RH80393	3	379.07			1	AC023130, AC076971,	AC023130, AC076971
S/G/Y/R/B/O	NT_019350		-		WI-12443			3	471.90	1	AC012020, AC019003,	AC012020, AC019003, AC019297
S/G/Y/R/B/O	NT_019350		-		CHLC.GATA112D03			3	476.20	0	AC106716,	AC021742, AC106716
S/G/Y/R/B/O	NT_019350		-		WI-5031			3	477.00	2	AC019003, AC078855, AC078856, AC092197,	AC019003, AC078855, AC078856, AC092197
S/G/Y/R/B/O	NT_019350		-		WI-14584			3	478.60	1	AC016138,	AC016138, AC069225
S/G/Y/R/B/O	NT_019350		-		SGC35488			3	478.90	1	AC023602,	AC023602, AC069225
S/G/Y/R/B/O	NT_019350		-		SGC38382			3	479.10	1	AC023602,	AC023602, AC069225
S/G/Y/R/B/O	NT_019350		-		SGC35478			3	479.40	1	AC016138,	AC016138, AC069225
S/G/Y/R/B/O	NT_019350		-		AFMA281WA5			3	481.30	1	AC027095, AC112485,	AC027095, AC112485
S/G/Y/R/B/O	NT_019350		-		WI-5881			3	483.40	1	AC068776,	AC068776
S/G/Y/R/B/O	NT_019350		-		D3S1563			3	483.40	1	AC079382,	AC079382