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  Chromosome 3 - RH Maps - Single Contig
 

Chromosome 3 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_005927 NT_029265 NT_028123 NT_006044 NT_022517 NT_005507 NT_022516 NT_005564
NT_005762 NT_005646 NT_028139 NT_033044 NT_005502 NT_022539 NT_022464 NT_005580
NT_033049 NT_005498 NT_006036 NT_005825 NT_029949 NT_005991 NT_005585 NT_022567
NT_028129 NT_005990 NT_030623 NT_022439 NT_006014 NT_033032 NT_005986 NT_033015
NT_033038 NT_022552 NT_005787 NT_033040 NT_022481 NT_005607 NT_033026 NT_005999
NT_005531 NT_022473 NT_022423 NT_005510 NT_022510 NT_022665 NT_028127 NT_022400
NT_005530 NT_029258 NT_022442 NT_005769 NT_005526 NT_022540 NT_022717 NT_005644
NT_022446 NT_005583 NT_033034 NT_005882 NT_033036 NT_022419 NT_006031 NT_022551
NT_022459 NT_033029 NT_022713 NT_022460 NT_033011 NT_022554 NT_022720 NT_005684
NT_005663 NT_033018 NT_022420 NT_033043 NT_022642 NT_005791 NT_022452 NT_022435
NT_033028 NT_022497 NT_022625 NT_005568 NT_022401 NT_033031 NT_026983 NT_022475
NT_033037 NT_022451 NT_005509 NT_005527 NT_033050 NT_030634 NT_033041 NT_005863
NT_022454 NT_022607 NT_022453 NT_025670 NT_030622 NT_033045 NT_022728 NT_031768
NT_019350 NT_022434 NT_029256 NT_022405 NT_022569 NT_006042 NT_022484 NT_005795
NT_015150 NT_022445 NT_030625 NT_005532 NT_029269 NT_022455 NT_029931 NT_033022
NT_029257 NT_005513 NT_005994 NT_030635 NT_022411 NT_005824 NT_033021 NT_005543
NT_005588 NT_006029 NT_022513 NT_005523 NT_033014 NT_006025 NT_022404 NT_005823
NT_033019 NT_022393 NT_025663 NT_005567 NT_030630 NT_005969 NT_033051 NT_025664
NT_005655 NT_022503 NT_022632 NT_033024 NT_022416 NT_022432 NT_033020 NT_033035
NT_033042 NT_005832 NT_022502 NT_005772 NT_019358 NT_005591 NT_005775 NT_022616
NT_005540 NT_029939 NT_005616 NT_005539 NT_022555 NT_005849 NT_005657 NT_005678
NT_005846 NT_005612 NT_033030 NT_022463 NT_022594 NT_022449 NT_022421 NT_005744
NT_022565 NT_022518 NT_005638 NT_022397 NT_022700 NT_022422 NT_025667 NT_033052
NT_022472 NT_033033 NT_022526 NT_022674 NT_022458 NT_022509 NT_005635 NT_033053
NT_005950 NT_022396 NT_005952 NT_022406 NT_022676 NT_029253 NT_030638 NT_005910
NT_022549 NT_033009 NT_005911 NT_005962 NT_031766 NT_005883 NT_005501 NT_005571
NT_033017 NT_033013 NT_029928 NT_033010 NT_005834 NT_005535 NT_033012 NT_033016
NT_022508


  NT_030630
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_030630AC0973131428627541RH173377168.09    2AC006511, AC006511
S/G/Y/R/B/O NT_030630AC0973131428653611RH670751289.79    2AC020645, AL139425, AC020645, AC097313, AL139425
S/G/Y/R/B/O NT_030630AC0973131428654841RH646261287.06    2AC020645, AL139425, AC020645, AC097313, AL139425
S/G/Y/R/B/O NT_030630AC0973131428655591RH258861287.36    2AC020645, AL139425, AC020645, AC097313, AL139425
S/G/Y/R/B/O NT_030630AC0973131428658741RH646081287.06    2AC020645, AL139425, AC020645, AC097313, AL139425
S/G/Y/R/B/O NT_030630AC0973131428659271RH251341270.59    2AC020645, AL139425, AC020645, AC097313, AL139425
S/G/Y/R/B/O NT_030630AC0973131428659271RH646371286.96    2AC020645, AL139425, AC020645, AC097313, AL139425
S/G/Y/R/B/O NT_030630AC0973131428670661RH38057  92011.00  2AL671309, AC073124, AC097313, AL671309
S/G/Y/R/B/O NT_030630AC0973131428693321RH159715531.42    3AC010223, AC044871, AC008688, AC010223, AC025436, AC044871, AC097313, AC097313
S/G/Y/R/B/O NT_030630AC0973131428716171RH5212411219.55  11298.702AP002358, AC087689, AC097313, AP002358
S/G/Y/R/B/O NT_030630AC0973131428717301RH1051211221.63    2AP002358, AC087689, AC097313, AP000406, AP002358
S/G/Y/R/B/O NT_030630AC0973131428724361RH621408430.62  8537.302AC015952, AF181450, AF268619, AC015952, AC097313, AF181450, AF198490, AF268619
S/G/Y/R/B/O NT_030630AC0973131428724691RH120518428.70    2AC015952, AF181450, AF268619, AC015952, AC097313, AF181450, AF198490, AF268619
S/G/Y/R/B/O NT_030630AC0973131428770071RH167333454.85    1AC024558, AC024558, AC097313
S/G/Y/R/B/O NT_030630AC0973131428770481RH582033447.92  3558.101AC024558, AC024558, AC097313
S/G/Y/R/B/O NT_030630AC0973131428775431RH668705469.30    2AC008575, AC109473, AC008575, AC079463, AC097313, AC109473, AC113356
S/G/Y/R/B/O NT_030630AC0973131428784621RH498321509.73  1611.502AC022965, AL365221, AL390725, AC022965, AC097313, AL365221, AL390725, AL611965
S/G/Y/R/B/O NT_030630AC0973131428784771RH183001517.70    2AC022965, AL365221, AL390725, AC022965, AC097313, AL365221, AL390725, AL611965
S/G/Y/R/B/O NT_030630AC0973131428815731RH5718620262.42  20297.602AL133520, AC097313, AL133520
S/G/Y/R/B/O NT_030630AC0973131428851281RH255251445.56    2AL049777, AL049777, AC097313, AL049777, AL049777
S/G/Y/R/B/O NT_030630AC0973131428862291RH673281444.41    2AL049777, AL049777, AC097313, AL049777, AL049777
S/G/Y/R/B/O NT_030630AC0973131428862791RH534711445.10  1451.302AL049777, AL049777, AC097313, AL049777, AL049777
S/G/Y/R/B/O NT_030630AC0973131428887301RH9823719237.06    2AC007842, AC007842, AC097313, AL513183
S/G/Y/R/B/O NT_030630AC0973131428887311RH3915819234.96    2AC007842, AC007842, AC097313, AL513183
S/G/Y/R/B/O NT_030630AC0973131428901661RH2606111103.43    2AC024229, AC087750, AC024229, AC087750, AC097313
S/G/Y/R/B/O NT_030630AC0973131428928661RH671738432.38    3AC009627, AC021801, AC009627, AC021801, AC097313
S/G/Y/R/B/O NT_030630AC0973131428928671RH670548432.06    3AC009627, AC021801, AC009627, AC021801, AC097313
S/G/Y/R/B/O NT_030630AC0973131428929411RH648368434.04    3AC009627, AC021801, AC009627, AC021801, AC097313
S/G/Y/R/B/O NT_030630AC0973131428932021RH599215387.58  5283.902AC020901, AC026436, AC020901, AC026436, AC097313
S/G/Y/R/B/O NT_030630AC0973131428932961RH169275387.38    2AC020901, AC026436, AC020901, AC026436, AC097313
S/G/Y/R/B/O NT_030630AC0973131428946501RH104943550.82    2 AC069236, AC097313
S/G/Y/R/B/O NT_030630AC0973131429008031RH943148478.86    2AC011134, AC011170, AF216672, AC011134, AC011170, AC097313, AF216672
S/G/Y/R/B/O NT_030630AC0973131429028811RH1822918237.60    2AC010854, AC012269, AC018371, AP001176, AC010854, AC011968, AC012269, AC018371, AC097313, AP001176, AP001272, AP001275
S/G/Y/R/B/O NT_030630AC0973131429031571WI-21214    18221.402AC010854, AC012269, AC018371, AP001176, AC010854, AC011968, AC012269, AC018371, AC097313, AP001176, AP001272, AP001275
S/G/Y/R/B/O NT_030630AC0973131429038631RH251721670.61    2AC009167, AC009167, AC097313
S/G/Y/R/B/O NT_030630AC0973131429059321RH599975500.33  5420.002AC007199, AC011336, AC007199, AC011336, AC097313
S/G/Y/R/B/O NT_030630AC0973131429072391RH412375295.39    2AC008267, AC008267, AC097313
S/G/Y/R/B/O NT_030630AC0973131429090441RH74530  140.00  2AL161668, AL355922, AC097313, AF321003, AL161668, AL355922
S/G/Y/R/B/O NT_030630AC0973131429112701RH479808447.37    1AC021237, AC021237, AC097313, AF286886, AP004388
S/G/Y/R/B/O NT_030630AC0973131429123171RH621808445.61  8590.702AC021237, AC021237, AC097313, AF286886, AP004388
S/G/Y/R/B/O NT_030630AC0973131429126141RH601675531.72  5441.702AC010223, AC044871, AC008688, AC010223, AC025436, AC044871, AC097313
S/G/Y/R/B/O NT_030630AC0973131429126141RH602545531.42  5441.702AC010223, AC044871, AC008688, AC010223, AC025436, AC044871, AC097313
S/G/Y/R/B/O NT_030630AC0973131429181681RH169382743.33    2AC114750, AC097313, AC114750
S/G/Y/R/B/O NT_030630AC0973131429214881RH159715531.42    3AC010223, AC044871, AC008688, AC010223, AC025436, AC044871, AC097313, AC097313
S/G/Y/R/B/O NT_030630AC0973131429239751RH943045471.95    2AC008536, AC106750, AC008536, AC097313, AC106750
S/G/Y/R/B/O NT_030630AC0973131429268531RH622018448.28  8570.802AC007719, AC007719, AC097313
S/G/Y/R/B/O NT_030630AC0973131429274391RH1023925417.89    3AC008850, AC008908, AC009126, AC008850, AC008908, AC009073, AC009126, AC022114, AC097313
S/G/Y/R/B/O NT_030630AC0973131429295561RH616927675.22  7648.402AC072057, AC072057, AC097313
S/G/Y/R/B/O NT_030630AC0973131429300021RH784887675.32    2AC072057, AC072057, AC097313
S/G/Y/R/B/O NT_030630AC0973131429300371RH408067675.32    2AC072057, AC072057, AC097313


  NT_030630 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_030630AC0973131429326381RH917072624.57    2AC016746, AC016746, AC097313
S/G/Y/R/B/O NT_030630AC0973131429329501RH1000216167.28    2AC009167, AC009167, AC097313
S/G/Y/R/B/O NT_030630AC0973131429335571RH4870516165.62    2AC009167, AC009167, AC097313