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  Chromosome 3 - RH Maps - Single Contig
 

Chromosome 3 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_005927 NT_029265 NT_028123 NT_006044 NT_022517 NT_005507 NT_022516 NT_005564
NT_005762 NT_005646 NT_028139 NT_033044 NT_005502 NT_022539 NT_022464 NT_005580
NT_033049 NT_005498 NT_006036 NT_005825 NT_029949 NT_005991 NT_005585 NT_022567
NT_028129 NT_005990 NT_030623 NT_022439 NT_006014 NT_033032 NT_005986 NT_033015
NT_033038 NT_022552 NT_005787 NT_033040 NT_022481 NT_005607 NT_033026 NT_005999
NT_005531 NT_022473 NT_022423 NT_005510 NT_022510 NT_022665 NT_028127 NT_022400
NT_005530 NT_029258 NT_022442 NT_005769 NT_005526 NT_022540 NT_022717 NT_005644
NT_022446 NT_005583 NT_033034 NT_005882 NT_033036 NT_022419 NT_006031 NT_022551
NT_022459 NT_033029 NT_022713 NT_022460 NT_033011 NT_022554 NT_022720 NT_005684
NT_005663 NT_033018 NT_022420 NT_033043 NT_022642 NT_005791 NT_022452 NT_022435
NT_033028 NT_022497 NT_022625 NT_005568 NT_022401 NT_033031 NT_026983 NT_022475
NT_033037 NT_022451 NT_005509 NT_005527 NT_033050 NT_030634 NT_033041 NT_005863
NT_022454 NT_022607 NT_022453 NT_025670 NT_030622 NT_033045 NT_022728 NT_031768
NT_019350 NT_022434 NT_029256 NT_022405 NT_022569 NT_006042 NT_022484 NT_005795
NT_015150 NT_022445 NT_030625 NT_005532 NT_029269 NT_022455 NT_029931 NT_033022
NT_029257 NT_005513 NT_005994 NT_030635 NT_022411 NT_005824 NT_033021 NT_005543
NT_005588 NT_006029 NT_022513 NT_005523 NT_033014 NT_006025 NT_022404 NT_005823
NT_033019 NT_022393 NT_025663 NT_005567 NT_030630 NT_005969 NT_033051 NT_025664
NT_005655 NT_022503 NT_022632 NT_033024 NT_022416 NT_022432 NT_033020 NT_033035
NT_033042 NT_005832 NT_022502 NT_005772 NT_019358 NT_005591 NT_005775 NT_022616
NT_005540 NT_029939 NT_005616 NT_005539 NT_022555 NT_005849 NT_005657 NT_005678
NT_005846 NT_005612 NT_033030 NT_022463 NT_022594 NT_022449 NT_022421 NT_005744
NT_022565 NT_022518 NT_005638 NT_022397 NT_022700 NT_022422 NT_025667 NT_033052
NT_022472 NT_033033 NT_022526 NT_022674 NT_022458 NT_022509 NT_005635 NT_033053
NT_005950 NT_022396 NT_005952 NT_022406 NT_022676 NT_029253 NT_030638 NT_005910
NT_022549 NT_033009 NT_005911 NT_005962 NT_031766 NT_005883 NT_005501 NT_005571
NT_033017 NT_033013 NT_029928 NT_033010 NT_005834 NT_005535 NT_033012 NT_033016
NT_022508


  NT_022393
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022393AC0557541376431783RH922703467.39    1 AC055754
S/G/Y/R/B/O NT_022393AC0216591377583391D3S1292    3602.101 AC021659
S/G/Y/R/B/O NT_022393AC0216591377583391RH133443467.3936539.00  1 AC021659
S/G/Y/R/B/O NT_022393AC0769611378267351          
S/G/Y/R/B/O NT_022393AL5922091379023202          
S/G/Y/R/B/O NT_022393AC0730211380521901          
S/G/Y/R/B/O NT_022393AC0274631380596841          
S/G/Y/R/B/O NT_022393AC0557501380736801          
S/G/Y/R/B/O NT_022393AC0689831380925911          
S/G/Y/R/B/O NT_022393AC0206331382255493RH415543469.51    1AC027463, AC020633, AC027463, AL359635
S/G/Y/R/B/O NT_022393AC0263741383744523RH486263463.72    1 AC026374
S/G/Y/R/B/O NT_022393AC0206321383890493RH1034733472.49    1 AC020632
S/G/Y/R/B/O NT_022393AC0206321383941483RH261473472.97    1 AC020632
S/G/Y/R/B/O NT_022393AC0206321384074763RH256363470.32    1 AC020632
S/G/Y/R/B/O NT_022393AC0206321384268253RH587203472.65  3610.001 AC020632
S/G/Y/R/B/O NT_022393AC0206321384621963RH672033470.32    1 AC020632
S/G/Y/R/B/O NT_022393AC0206321385367043RH37826  36453.00  1 AC020632, AC022275
S/G/Y/R/B/O NT_022393AC0206321385456383RH414873470.53    1 AC020632, AC022275
S/G/Y/R/B/O NT_022393AC0206321385461673RH1030183472.87    1AC055732, AC020632, AC022275, AC055732
S/G/Y/R/B/O NT_022393AC0557321385479443          
S/G/Y/R/B/O NT_022393AC0189161387221773          
S/G/Y/R/B/O NT_022393AC0799421387377673          
S/G/Y/R/B/O NT_022393AC0929841389265031RH804833469.80    1 AC068940, AC092984
S/G/Y/R/B/O NT_022393AC0929841389760991RH35085  36436.00  1AC018472, AC018472, AC068940, AC092984
S/G/Y/R/B/O NT_022393AC0929841389904621RH445073472.54    1AC018472, AC018472, AC068940, AC092984
S/G/Y/R/B/O NT_022393AC0929841389904921RH581483472.92  3612.801AC018472, AC018472, AC068940, AC092984
S/G/Y/R/B/O NT_022393AC0184721395154371D3S1290    3610.101AC055753, AC018472, AC055753
S/G/Y/R/B/O NT_022393AC0184721395155901RH38613  36419.00  1AC055753, AC018472, AC055753
S/G/Y/R/B/O NT_022393AC0732441390962953          
S/G/Y/R/B/O NT_022393AC0169511391955123RH30834  36371.00  1AC073244, AC016951, AC021051, AC073244
S/G/Y/R/B/O NT_022393AC0169511392259333RH655913476.02    1 AC016951, AC021051
S/G/Y/R/B/O NT_022393AC0639181392786091          
S/G/Y/R/B/O NT_022393AC0169311393552091RH587723475.74  3617.101AC063918, AC016931, AC063918
S/G/Y/R/B/O NT_022393AC0557531395982253RH687363472.32    1AC076965, AC055753, AC076965
S/G/Y/R/B/O NT_022393AC0557531396393603RH587743472.11  3592.001AC076965, AC055753, AC076965
S/G/Y/R/B/O NT_022393AC0222961397790461RH415853472.60    1AC076965, AC022296, AC076965
S/G/Y/R/B/O NT_022393AC0222961398202531RH706483472.21    1 AC022296, AF195044
S/G/Y/R/B/O NT_022393AC0769651397461131          
S/G/Y/R/B/O NT_022393AC0162551398394071RH471153472.17    2AC027752, AC106717, AL139395, AC016255, AC027752, AC106717, AL139395
S/G/Y/R/B/O NT_022393AC0162551398399841RH415053472.11    1 AC016255
S/G/Y/R/B/O NT_022393AC0162551398516811RH589143472.1136419.003591.701 AC016255
S/G/Y/R/B/O NT_022393AC0162551398517471RH171283473.61    1 AC016255
S/G/Y/R/B/O NT_022393AC0839051399208671RH1035013485.91    1AC016255, AC016255, AC083905
S/G/Y/R/B/O NT_022393AC0839051400006841RH697813471.96    1 AC083905
S/G/Y/R/B/O NT_022393AC0839051400228401RH588473473.50  3614.001AC073361, AC080128, AC073361, AC080128, AC083905
S/G/Y/R/B/O NT_022393AC0839051400307721RH415013473.72    1AC073361, AC080128, AC073361, AC080128, AC083905
S/G/Y/R/B/O NT_022393AC0839051400317241RH416623473.61    1AC073361, AC080128, AC073361, AC080128, AC083905
S/G/Y/R/B/O NT_022393AC0839051400317481RH13834  36415.00  1AC073361, AC080128, AC073361, AC080128, AC083905
S/G/Y/R/B/O NT_022393AC0839051400317791RH587953473.7236411.003615.801AC073361, AC080128, AC073361, AC080128, AC083905
S/G/Y/R/B/O NT_022393AC0801281400545961RH1041463473.72    1AC073361, AC083905, AC073361, AC080128, AC083905


  NT_022393 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022393AC0801281400590221RH670603471.96    1AC073361, AC083905, AC073361, AC080128, AC083905
S/G/Y/R/B/O NT_022393AC0801281400730381RH104053473.61    1AC073361, AC073361, AC080128
S/G/Y/R/B/O NT_022393AC0801281400732081WI-13553    3617.101 AC080128
S/G/Y/R/B/O NT_022393AC0801281400732081RH582903485.44    1 AC080128
S/G/Y/R/B/O NT_022393AC0801281400733851RH588313472.00  3589.901AC073361, AC073361, AC080128
S/G/Y/R/B/O NT_022393AC0801281400737821RH117133473.72    1AC073361, AC073361, AC080128
S/G/Y/R/B/O NT_022393AC0801281400776901RH582793473.24  3616.301AC073361, AC073361, AC080128
S/G/Y/R/B/O NT_022393AC0801281400801531RH586243473.03  3608.301AC073361, AC073361, AC080128
S/G/Y/R/B/O NT_022393AC0801281400803181RH117703486.02    1AC073361, AC073361, AC080128
S/G/Y/R/B/O NT_022393AC0801281401861481RH586623473.72  3615.801 AC080128, AF056732
S/G/Y/R/B/O NT_022393AC0733611402736841          
S/G/Y/R/B/O NT_022393 - RH102583473.61    1AC010207, AC026117, AC010207, AC026117
S/G/Y/R/B/O NT_022393 - RH14067  36342.00  1AC026969, AC092991, AC026969, AC092991
S/G/Y/R/B/O NT_022393 - WI-6881    3592.201AC023757, AC107027, AC023757, AC107027
S/G/Y/R/B/O NT_022393 - RH1031143476.02    0 AC073157
S/G/Y/R/B/O NT_022393 - RH1993  36383.00  0 AC073157, AC109912
S/G/Y/R/B/O NT_022393 - WI-14631    3593.401AC010210, AC108732, AC010210, AC108732
S/G/Y/R/B/O NT_022393 - RH367563473.08    0  
S/G/Y/R/B/O NT_022393 - RH30066  36499.00  1AC116424, AC025148, AC116424
S/G/Y/R/B/O NT_022393 - WI-9036    3595.901AC023757, AC107027, AC023757, AC107027
S/G/Y/R/B/O NT_022393 - RH415213475.63    1AC010207, AC026117, AC010207, AC026117
S/G/Y/R/B/O NT_022393 - RH30833  36391.00  1AC108728, AC108728
S/G/Y/R/B/O NT_022393 - WI-22671    3596.401AC055727, AC055870, AC055727, AC055870, AC083906
S/G/Y/R/B/O NT_022393 - RH579593472.76    1AC023757, AC023757
S/G/Y/R/B/O NT_022393 - RH585033475.0036383.003615.801AC010207, AC026117, AC010207, AC026117
S/G/Y/R/B/O NT_022393 - RH708823475.63    1AC108728, AC108728
S/G/Y/R/B/O NT_022393 - D3S3637    3615.800 AC073157
S/G/Y/R/B/O NT_022393 - RH764813471.90    0AC073361, AC083905, AC073361, AC083905
S/G/Y/R/B/O NT_022393 - RH787483473.61    0  
S/G/Y/R/B/O NT_022393 - RH810743475.10    1AC108728, AC108742, AC108728, AC108742
S/G/Y/R/B/O NT_022393 - RH936373476.02    0 AC073157
S/G/Y/R/B/O NT_022393 - RH3256036391.003616.701AC010207, AC026117, AC010207, AC026117
S/G/Y/R/B/O NT_022393 - RH33114  36396.00  1AC010207, AC010207
S/G/Y/R/B/O NT_022393 - RH33510  36515.00  1AC010210, AC108732, AC010210, AC108732