Chromosome 3 - RH Maps - Single Contig

Chromosome 3 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_005927	NT_029265	NT_028123	NT_006044	NT_022517	NT_005507	NT_022516	NT_005564
NT_005762	NT_005646	NT_028139	NT_033044	NT_005502	NT_022539	NT_022464	NT_005580
NT_033049	NT_005498	NT_006036	NT_005825	NT_029949	NT_005991	NT_005585	NT_022567
NT_028129	NT_005990	NT_030623	NT_022439	NT_006014	NT_033032	NT_005986	NT_033015
NT_033038	NT_022552	NT_005787	NT_033040	NT_022481	NT_005607	NT_033026	NT_005999
NT_005531	NT_022473	NT_022423	NT_005510	NT_022510	NT_022665	NT_028127	NT_022400
NT_005530	NT_029258	NT_022442	NT_005769	NT_005526	NT_022540	NT_022717	NT_005644
NT_022446	NT_005583	NT_033034	NT_005882	NT_033036	NT_022419	NT_006031	NT_022551
NT_022459	NT_033029	NT_022713	NT_022460	NT_033011	NT_022554	NT_022720	NT_005684
NT_005663	NT_033018	NT_022420	NT_033043	NT_022642	NT_005791	NT_022452	NT_022435
NT_033028	NT_022497	NT_022625	NT_005568	NT_022401	NT_033031	NT_026983	NT_022475
NT_033037	NT_022451	NT_005509	NT_005527	NT_033050	NT_030634	NT_033041	NT_005863
NT_022454	NT_022607	NT_022453	NT_025670	NT_030622	NT_033045	NT_022728	NT_031768
NT_019350	NT_022434	NT_029256	NT_022405	NT_022569	NT_006042	NT_022484	NT_005795
NT_015150	NT_022445	NT_030625	NT_005532	NT_029269	NT_022455	NT_029931	NT_033022
NT_029257	NT_005513	NT_005994	NT_030635	NT_022411	NT_005824	NT_033021	NT_005543
NT_005588	NT_006029	NT_022513	NT_005523	NT_033014	NT_006025	NT_022404	NT_005823
NT_033019	NT_022393	NT_025663	NT_005567	NT_030630	NT_005969	NT_033051	NT_025664
NT_005655	NT_022503	NT_022632	NT_033024	NT_022416	NT_022432	NT_033020	NT_033035
NT_033042	NT_005832	NT_022502	NT_005772	NT_019358	NT_005591	NT_005775	NT_022616
NT_005540	NT_029939	NT_005616	NT_005539	NT_022555	NT_005849	NT_005657	NT_005678
NT_005846	NT_005612	NT_033030	NT_022463	NT_022594	NT_022449	NT_022421	NT_005744
NT_022565	NT_022518	NT_005638	NT_022397	NT_022700	NT_022422	NT_025667	NT_033052
NT_022472	NT_033033	NT_022526	NT_022674	NT_022458	NT_022509	NT_005635	NT_033053
NT_005950	NT_022396	NT_005952	NT_022406	NT_022676	NT_029253	NT_030638	NT_005910
NT_022549	NT_033009	NT_005911	NT_005962	NT_031766	NT_005883	NT_005501	NT_005571
NT_033017	NT_033013	NT_029928	NT_033010	NT_005834	NT_005535	NT_033012	NT_033016
NT_022508

NT_022513

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_022513	AC080005	133607550	1	RH12847	3	452.72					1		AC080005
S/G/Y/R/B/O	NT_022513	AC080005	133823023	1	RH45504	3	452.72					1	AC079945,	AC079945, AC080005, AF008191
S/G/Y/R/B/O	NT_022513	AC080005	134261313	1	RH58621	3	452.72			3	550.70	1	AC092549,	AC027635, AC080005, AC092549
S/G/Y/R/B/O	NT_022513	AC080005	134262214	1	RH12815	3	452.72					1	AC092549,	AC080005, AC092549
S/G/Y/R/B/O	NT_022513	AC080005	134279465	1	RH92427	3	452.72					1	AC092549, AF301236,	AC027635, AC080005, AC092549, AF301236
S/G/Y/R/B/O	NT_022513	AC112642	133632236	1
S/G/Y/R/B/O	NT_022513	AL449214	133659409	2	AFMA339WC5					3	563.80	1		AC069419
S/G/Y/R/B/O	NT_022513	AL449215	133681680	2	RH8626			3	4866.00			1		AL449215
S/G/Y/R/B/O	NT_022513	AL449215	133681884	2	RH11540	3	452.72					2	AC079945,	AC079945, AL449215
S/G/Y/R/B/O	NT_022513	AL449215	133699542	2	RH48451	3	448.23					2	AC079945,	AC079945, AL449215
S/G/Y/R/B/O	NT_022513	AL449215	133753033	2	RH45492	3	452.72					1	AC079945,	AC079945, AL449215
S/G/Y/R/B/O	NT_022513	AC079945	133854273	1	RH11540	3	452.72					2	AL449215,	AC079945, AL449215
S/G/Y/R/B/O	NT_022513	AC079945	133871955	1	RH48451	3	448.23					2	AL449215,	AC079945, AL449215
S/G/Y/R/B/O	NT_022513	AC084784	134057860	1	RH41527	3	452.59					1	AC112642, AL449210,	AC084784, AC112642, AL449210, AL449217
S/G/Y/R/B/O	NT_022513	AL449210	134126507	2	RH58025	3	456.77					1	AC092549,	AC092549, AF196968, AF196968, AL449210
S/G/Y/R/B/O	NT_022513	AL449210	134126507	2	SGC38238					3	550.90	1	AC092549,	AC092549, AF196968, AF196968, AL449210
S/G/Y/R/B/O	NT_022513	AL449210	134126918	2	RH45946	3	452.72					1	AC092549,	AC092549, AF196968, AF196968, AL449210
S/G/Y/R/B/O	NT_022513	AL449210	134189220	2	RH11864	3	448.89					1	AC092549, AF301236,	AC092549, AF301236, AL449210
S/G/Y/R/B/O	NT_022513	AC092549	134198211	1
S/G/Y/R/B/O	NT_022513	AF301236	134318620	1
S/G/Y/R/B/O	NT_022513		-		RH10567	3	454.65					1	AC024558, AC073439,	AC024558, AC073439
S/G/Y/R/B/O	NT_022513		-		IB3572					3	550.80	0
S/G/Y/R/B/O	NT_022513		-		RH11831	3	449.27					0
S/G/Y/R/B/O	NT_022513		-		RH12519	3	454.75					1	AC023593, AC073357,	AC023593, AC073020, AC073357
S/G/Y/R/B/O	NT_022513		-		RH16733	3	454.85					1	AC024558, AC097313,	AC024558, AC097313
S/G/Y/R/B/O	NT_022513		-		RH18464	3	451.41					0
S/G/Y/R/B/O	NT_022513		-		RH18487	3	452.72					1	AC024558, AC068818, AC078867,	AC024558, AC068818, AC078867
S/G/Y/R/B/O	NT_022513		-		RH25042	3	451.41					1	AC026957, AC092903,	AC026957, AC092903
S/G/Y/R/B/O	NT_022513		-		RH36296	3	452.62					1	AC011311,	AC011311, AC069419
S/G/Y/R/B/O	NT_022513		-		RH36481	3	452.59					0
S/G/Y/R/B/O	NT_022513		-		RH41603	3	454.65					1	AC024558, AC068818, AC078867,	AC024558, AC068818, AC078867
S/G/Y/R/B/O	NT_022513		-		RH41700	3	454.75					1	AC023593, AC084035,	AC012406, AC023593, AC084035
S/G/Y/R/B/O	NT_022513		-		RH42714	3	454.75					1	AC016968, AC084035,	AC016968, AC084035
S/G/Y/R/B/O	NT_022513		-		RH47414	3	449.27					1	AC026957, AC092903,	AC026957, AC092903
S/G/Y/R/B/O	NT_022513		-		RH48852	3	454.75					1	AC084035,	AC012406, AC084035
S/G/Y/R/B/O	NT_022513		-		RH58157	3	454.75					1	AC024558, AC073439,	AC024558, AC073439
S/G/Y/R/B/O	NT_022513		-		RH58203	3	447.92					1	AC024558, AC097313,	AC024558, AC097313
S/G/Y/R/B/O	NT_022513		-		RH58316	3	447.86					1	AC023162, AL449213,	AC023162, AL449213
S/G/Y/R/B/O	NT_022513		-		RH58467	3	452.72					1	AC023593, AC084035,	AC012406, AC023593, AC084035
S/G/Y/R/B/O	NT_022513		-		RH58749	3	448.02					1	AC108673,	AC108673
S/G/Y/R/B/O	NT_022513		-		RH66610	3	448.02					1	AC022993, AC023598, AC112484,	AC022993, AC023598, AC024933, AC112484
S/G/Y/R/B/O	NT_022513		-		RH68812	3	454.75					1	AC017042, AC078867, AC092898,	AC017042, AC078867, AC092898
S/G/Y/R/B/O	NT_022513		-		RH68853	3	454.65					1	AC024558, AC073439,	AC024558, AC073439
S/G/Y/R/B/O	NT_022513		-		RH69277	3	449.27					1	AC022944, AC108673,	AC022944, AC108673, AF389887, U19765
S/G/Y/R/B/O	NT_022513		-		RH75252	3	447.92					1	AC026957, AC092903,	AC026957, AC092903
S/G/Y/R/B/O	NT_022513		-		RH78088	3	451.41					0	AC016924,	AC016924
S/G/Y/R/B/O	NT_022513		-		RH80252	3	452.82					1	AC079848,	AC079848
S/G/Y/R/B/O	NT_022513		-		RH92086	3	454.65					1	AC063919, AC073439,	AC063919, AC073439
S/G/Y/R/B/O	NT_022513		-		RH98767	3	454.65					1	AC084035,	AC012406, AC084035
S/G/Y/R/B/O	NT_022513		-		RH9961	3	452.82					1	AC011199,	AC011199