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  Chromosome 3 - RH Maps - Single Contig
 

Chromosome 3 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_005927 NT_029265 NT_028123 NT_006044 NT_022517 NT_005507 NT_022516 NT_005564
NT_005762 NT_005646 NT_028139 NT_033044 NT_005502 NT_022539 NT_022464 NT_005580
NT_033049 NT_005498 NT_006036 NT_005825 NT_029949 NT_005991 NT_005585 NT_022567
NT_028129 NT_005990 NT_030623 NT_022439 NT_006014 NT_033032 NT_005986 NT_033015
NT_033038 NT_022552 NT_005787 NT_033040 NT_022481 NT_005607 NT_033026 NT_005999
NT_005531 NT_022473 NT_022423 NT_005510 NT_022510 NT_022665 NT_028127 NT_022400
NT_005530 NT_029258 NT_022442 NT_005769 NT_005526 NT_022540 NT_022717 NT_005644
NT_022446 NT_005583 NT_033034 NT_005882 NT_033036 NT_022419 NT_006031 NT_022551
NT_022459 NT_033029 NT_022713 NT_022460 NT_033011 NT_022554 NT_022720 NT_005684
NT_005663 NT_033018 NT_022420 NT_033043 NT_022642 NT_005791 NT_022452 NT_022435
NT_033028 NT_022497 NT_022625 NT_005568 NT_022401 NT_033031 NT_026983 NT_022475
NT_033037 NT_022451 NT_005509 NT_005527 NT_033050 NT_030634 NT_033041 NT_005863
NT_022454 NT_022607 NT_022453 NT_025670 NT_030622 NT_033045 NT_022728 NT_031768
NT_019350 NT_022434 NT_029256 NT_022405 NT_022569 NT_006042 NT_022484 NT_005795
NT_015150 NT_022445 NT_030625 NT_005532 NT_029269 NT_022455 NT_029931 NT_033022
NT_029257 NT_005513 NT_005994 NT_030635 NT_022411 NT_005824 NT_033021 NT_005543
NT_005588 NT_006029 NT_022513 NT_005523 NT_033014 NT_006025 NT_022404 NT_005823
NT_033019 NT_022393 NT_025663 NT_005567 NT_030630 NT_005969 NT_033051 NT_025664
NT_005655 NT_022503 NT_022632 NT_033024 NT_022416 NT_022432 NT_033020 NT_033035
NT_033042 NT_005832 NT_022502 NT_005772 NT_019358 NT_005591 NT_005775 NT_022616
NT_005540 NT_029939 NT_005616 NT_005539 NT_022555 NT_005849 NT_005657 NT_005678
NT_005846 NT_005612 NT_033030 NT_022463 NT_022594 NT_022449 NT_022421 NT_005744
NT_022565 NT_022518 NT_005638 NT_022397 NT_022700 NT_022422 NT_025667 NT_033052
NT_022472 NT_033033 NT_022526 NT_022674 NT_022458 NT_022509 NT_005635 NT_033053
NT_005950 NT_022396 NT_005952 NT_022406 NT_022676 NT_029253 NT_030638 NT_005910
NT_022549 NT_033009 NT_005911 NT_005962 NT_031766 NT_005883 NT_005501 NT_005571
NT_033017 NT_033013 NT_029928 NT_033010 NT_005834 NT_005535 NT_033012 NT_033016
NT_022508


  NT_005498
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005498AC073219394067711RH360623133.50    1 AC073219
S/G/Y/R/B/O NT_005498AC073219394245481RH486433132.27    1 AC073219
S/G/Y/R/B/O NT_005498AC073219394366331RH698183135.41    1 AC073219
S/G/Y/R/B/O NT_005498AC073219394377971RH686233135.41    1 AC073219
S/G/Y/R/B/O NT_005498AC073219394378281RH103653133.50    1 AC073219
S/G/Y/R/B/O NT_005498AC073219394378961RH106283135.41    1 AC073219
S/G/Y/R/B/O NT_005498AC073219394379261SGC30045    3143.501 AC073219
S/G/Y/R/B/O NT_005498AC073219394379261RH588243132.3731619.00  1 AC073219
S/G/Y/R/B/O NT_005498AC073219394381391RH588613135.51  3146.101 AC073219
S/G/Y/R/B/O NT_005498AC073219394384891RH171833135.41    1 AC073219
S/G/Y/R/B/O NT_005498AC073219394385161RH127753133.50    1 AC073219
S/G/Y/R/B/O NT_005498AC092053394806303RH800803119.96    1AC073219, AC073219, AC092053
S/G/Y/R/B/O NT_005498AC092053394813103RH481513132.27    1AC073219, AC073219, AC092053
S/G/Y/R/B/O NT_005498AC092053395219493RH926683135.41    1 AC092053
S/G/Y/R/B/O NT_005498AC092053396022003RH99923135.51    1 AC092053, AC104850
S/G/Y/R/B/O NT_005498AC092053396035313RH918033124.02    1AY016370, AC092053, AC104850, AY016370
S/G/Y/R/B/O NT_005498AC092053396040283RH705903135.41    1AY016370, AC092053, AC104850, AY016370
S/G/Y/R/B/O NT_005498AC092053396094873SGC44481    3144.501AY016370, AC092053, AC104850, AY016370
S/G/Y/R/B/O NT_005498AC092053396094873RH588323124.12    1AY016370, AC092053, AC104850, AY016370
S/G/Y/R/B/O NT_005498AY016370396338673          
S/G/Y/R/B/O NT_005498AC099332396402223RH450544248.96    5AC016898, AC097712, AL359984, AL590114, AP001207, Z73986, AC016898, AC097712, AC104850, AL359984, AL590114, AL672206, AP001207, Z73986
S/G/Y/R/B/O NT_005498AC099332396425423RH31672  31633.00  1AY016370, AC099332, AC104850, AY016370
S/G/Y/R/B/O NT_005498AC099332397355623RH106653135.41    1 AC099332
S/G/Y/R/B/O NT_005498AC099332397355843RH419493157.78    1Z98043, AC025032, AC099332, Z98043
S/G/Y/R/B/O NT_005498AC099332397506483RH579143137.14  3153.701 AC099332, U43901
S/G/Y/R/B/O NT_005498AC099332397510463RH926283135.41    1 AC099332, U43901
S/G/Y/R/B/O NT_005498AC092058398500671WI-4073    3143.501 AC092058
S/G/Y/R/B/O NT_005498AC092058398663301RH580843135.41  3147.301 AC092058
S/G/Y/R/B/O NT_005498AC092058398667891RH581263135.41  3146.001 AC092058
S/G/Y/R/B/O NT_005498AC092058398689341WI-11135    3148.201 AC092058
S/G/Y/R/B/O NT_005498AC092058398689341RH588033135.31    1 AC092058
S/G/Y/R/B/O NT_005498AC092058398690581RH926433135.31    1 AC092058
S/G/Y/R/B/O NT_005498AC092058398728031RH810293120.18    1 AC092058
S/G/Y/R/B/O NT_005498AC092058398728301RH585433135.41  3147.201 AC092058
S/G/Y/R/B/O NT_005498AC092058398728701RH663693132.27    1 AC092058
S/G/Y/R/B/O NT_005498AC104444399853071RH674673135.31    1AC114772, AC114772
S/G/Y/R/B/O NT_005498AC104163400119371          
S/G/Y/R/B/O NT_005498AC104188401750863RH927253116.49    2AC098973, AC098973, AC104188
S/G/Y/R/B/O NT_005498AC104185402507773          
S/G/Y/R/B/O NT_005498AC110718403414721          
S/G/Y/R/B/O NT_005498AC099557403906623RH14406  31655.00  1AC110718, AC099557, AC110718
S/G/Y/R/B/O NT_005498AC099557403906623RH586183120.25  3125.901AC110718, AC099557, AC110718
S/G/Y/R/B/O NT_005498AC099557403908793RH286303142.43    1AC110718, AC099557, AC110718
S/G/Y/R/B/O NT_005498AC099557404335893WI-22530    3165.701 AC099557
S/G/Y/R/B/O NT_005498AC099557404335893RH582883142.95    1 AC099557
S/G/Y/R/B/O NT_005498AC099331404384133          
S/G/Y/R/B/O NT_005498 - RH251253137.45    0  
S/G/Y/R/B/O NT_005498 - WI-15506    3144.500  
S/G/Y/R/B/O NT_005498 - RH414583135.51    0  
S/G/Y/R/B/O NT_005498 - WI-16031    3144.900  


  NT_005498 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005498 - RH756393137.45    0  
S/G/Y/R/B/O NT_005498 - SGC30856    3146.301AC104307, AC069215, AC104307, AL359456
S/G/Y/R/B/O NT_005498 - WI-14688    3146.300  
S/G/Y/R/B/O NT_005498 - UTR-9849    3147.100  
S/G/Y/R/B/O NT_005498 - WI-20501    3147.901AC104186, AC104186