Chromosome 3 - RH Maps - Single Contig

Chromosome 3 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_005927	NT_029265	NT_028123	NT_006044	NT_022517	NT_005507	NT_022516	NT_005564
NT_005762	NT_005646	NT_028139	NT_033044	NT_005502	NT_022539	NT_022464	NT_005580
NT_033049	NT_005498	NT_006036	NT_005825	NT_029949	NT_005991	NT_005585	NT_022567
NT_028129	NT_005990	NT_030623	NT_022439	NT_006014	NT_033032	NT_005986	NT_033015
NT_033038	NT_022552	NT_005787	NT_033040	NT_022481	NT_005607	NT_033026	NT_005999
NT_005531	NT_022473	NT_022423	NT_005510	NT_022510	NT_022665	NT_028127	NT_022400
NT_005530	NT_029258	NT_022442	NT_005769	NT_005526	NT_022540	NT_022717	NT_005644
NT_022446	NT_005583	NT_033034	NT_005882	NT_033036	NT_022419	NT_006031	NT_022551
NT_022459	NT_033029	NT_022713	NT_022460	NT_033011	NT_022554	NT_022720	NT_005684
NT_005663	NT_033018	NT_022420	NT_033043	NT_022642	NT_005791	NT_022452	NT_022435
NT_033028	NT_022497	NT_022625	NT_005568	NT_022401	NT_033031	NT_026983	NT_022475
NT_033037	NT_022451	NT_005509	NT_005527	NT_033050	NT_030634	NT_033041	NT_005863
NT_022454	NT_022607	NT_022453	NT_025670	NT_030622	NT_033045	NT_022728	NT_031768
NT_019350	NT_022434	NT_029256	NT_022405	NT_022569	NT_006042	NT_022484	NT_005795
NT_015150	NT_022445	NT_030625	NT_005532	NT_029269	NT_022455	NT_029931	NT_033022
NT_029257	NT_005513	NT_005994	NT_030635	NT_022411	NT_005824	NT_033021	NT_005543
NT_005588	NT_006029	NT_022513	NT_005523	NT_033014	NT_006025	NT_022404	NT_005823
NT_033019	NT_022393	NT_025663	NT_005567	NT_030630	NT_005969	NT_033051	NT_025664
NT_005655	NT_022503	NT_022632	NT_033024	NT_022416	NT_022432	NT_033020	NT_033035
NT_033042	NT_005832	NT_022502	NT_005772	NT_019358	NT_005591	NT_005775	NT_022616
NT_005540	NT_029939	NT_005616	NT_005539	NT_022555	NT_005849	NT_005657	NT_005678
NT_005846	NT_005612	NT_033030	NT_022463	NT_022594	NT_022449	NT_022421	NT_005744
NT_022565	NT_022518	NT_005638	NT_022397	NT_022700	NT_022422	NT_025667	NT_033052
NT_022472	NT_033033	NT_022526	NT_022674	NT_022458	NT_022509	NT_005635	NT_033053
NT_005950	NT_022396	NT_005952	NT_022406	NT_022676	NT_029253	NT_030638	NT_005910
NT_022549	NT_033009	NT_005911	NT_005962	NT_031766	NT_005883	NT_005501	NT_005571
NT_033017	NT_033013	NT_029928	NT_033010	NT_005834	NT_005535	NT_033012	NT_033016
NT_022508

NT_005616

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_005616	AC024991	155127075	1
S/G/Y/R/B/O	NT_005616	AC069410	155275727	3	RH41522	3	542.39					1	AC024991,	AC024991, AC069410, AC093000
S/G/Y/R/B/O	NT_005616	AC025155	155311950	3
S/G/Y/R/B/O	NT_005616	AC024897	155349192	3	RH80605	3	545.32					1		AC024897
S/G/Y/R/B/O	NT_005616	AC024897	155392377	3	SGC38226					3	669.30	1	AC024991,	AC024897, AC024991, AC025153, AC093000, AF245699
S/G/Y/R/B/O	NT_005616	AC024897	155392377	3	RH58461	3	536.18					1	AC024991,	AC024897, AC024991, AC025153, AC093000, AF245699
S/G/Y/R/B/O	NT_005616	AC024897	155414405	3	RH48548	3	534.53					1	AC024991,	AC024897, AC024991, AC025153, AC093000, AF245699
S/G/Y/R/B/O	NT_005616	AC024897	155419165	3	RH9046			3	7215.00			1	AC024991,	AC024897, AC024991, AC025153, AC093000, AF245699, Z11162
S/G/Y/R/B/O	NT_005616	AC024897	155419583	3	RH17842	3	542.39					1	AC024991,	AC024897, AC024991, AC025153, AC093000, AF245699, Z11162
S/G/Y/R/B/O	NT_005616	AC024897	155449450	3	RH38288			3	7215.00			1		AC024897, AC025153
S/G/Y/R/B/O	NT_005616	AC024897	155465652	3	RH8853			3	7163.00			1		AC024897
S/G/Y/R/B/O	NT_005616	AC024897	155495235	3	WI-5112					3	666.00	1	AC025354, AC092979,	AC024897, AC025354, AC092979
S/G/Y/R/B/O	NT_005616	AC067729	155536808	3	RH41558	3	542.39					1	AC025354, AC092979,	AC025354, AC055734, AC067729, AC092979
S/G/Y/R/B/O	NT_005616	AC067729	155536988	3	RH58199	3	543.61			3	671.50	1	AC025354, AC092979,	AC025354, AC055734, AC067729, AC092979
S/G/Y/R/B/O	NT_005616	AC092979	155573645	1	RH76236	3	543.71					1	AC013626, AC025354,	AC013626, AC025354, AC092979
S/G/Y/R/B/O	NT_005616	AC092979	155573836	1	RH14209			3	7160.00			1	AC013626, AC025354,	AC013626, AC025354, AC092979
S/G/Y/R/B/O	NT_005616	AC025354	155585803	1
S/G/Y/R/B/O	NT_005616	AC013626	155651627	1	WI-5850					3	673.50	1	AC021059,	AC013626, AC021059
S/G/Y/R/B/O	NT_005616	AC021059	155705064	1	WI-19179					3	672.10	1	AC013626,	AC013626, AC021059
S/G/Y/R/B/O	NT_005616	AC021059	155705064	1	RH58622	3	534.48					1	AC013626,	AC013626, AC021059
S/G/Y/R/B/O	NT_005616	AC021059	155705125	1	RH21143	3	534.81					1	AC013626,	AC013626, AC021059
S/G/Y/R/B/O	NT_005616	AC021059	155705410	1	RH41706	3	542.29					1	AC013626,	AC013626, AC021059
S/G/Y/R/B/O	NT_005616	AC021059	155708260	1	RH10248	3	536.28					1	AC013626,	AC013626, AC021059, AJ418064
S/G/Y/R/B/O	NT_005616	AC021059	155708307	1	RH12904	3	535.13					1	AC013626,	AC013626, AJ418064
S/G/Y/R/B/O	NT_005616	AC021059	155708377	1	RH10646	3	542.39					1	AC013626,	AC013626, AC021059, AJ418064
S/G/Y/R/B/O	NT_005616	AC021059	155709305	1	RH13995			3	7220.00			1	AC013626,	AC013626, AC021059, AJ418064
S/G/Y/R/B/O	NT_005616	AC021059	155717653	1	RH48704	3	535.02					1	AC013626,	AC013626, AC021059, AJ418064
S/G/Y/R/B/O	NT_005616	AC021059	155766816	1	RH652			3	7215.00			2	AC068577,	AC021059, AC021059, AC068577
S/G/Y/R/B/O	NT_005616	AC021059	155767459	1	RH42049	3	543.71					1		AC021059
S/G/Y/R/B/O	NT_005616	AC021059	155767658	1	RH652			3	7215.00			2	AC068577,	AC021059, AC021059, AC068577
S/G/Y/R/B/O	NT_005616	AC068577	155861835	1	RH69667	3	542.39					1	AC072027, AF375663,	AC068577, AC072027, AF375663
S/G/Y/R/B/O	NT_005616	AC068577	155862486	1	RH65500	3	542.39					1	AC072027,	AC068577, AC072027, AC104966
S/G/Y/R/B/O	NT_005616	AF375663	155843159	3	RH46381	3	535.17					1	AC072027,	AC072027, AF375663
S/G/Y/R/B/O	NT_005616	AC072027	155869174	1
S/G/Y/R/B/O	NT_005616	AC093001	156005585	3	RH888			3	7210.00			1		AC025119, AC073522, AC093001
S/G/Y/R/B/O	NT_005616	AC093001	156010552	3	RH103008	3	536.28					1		AC025119, AC093001
S/G/Y/R/B/O	NT_005616		-		RH41561	3	543.71					0
S/G/Y/R/B/O	NT_005616		-		RH14418			3	7206.00			0
S/G/Y/R/B/O	NT_005616		-		SGC35530					3	667.40	2	AC012014, AC108751,	AC012014, AC098589, AC108751
S/G/Y/R/B/O	NT_005616		-		RH81076	3	542.39					0
S/G/Y/R/B/O	NT_005616		-		RH14552			3	7212.00			1	AC027060, AC092959,	AC027060, AC092959
S/G/Y/R/B/O	NT_005616		-		RH91511	3	542.39					0