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  Chromosome 3 - RH Maps - Single Contig
 

Chromosome 3 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_005927 NT_029265 NT_028123 NT_006044 NT_022517 NT_005507 NT_022516 NT_005564
NT_005762 NT_005646 NT_028139 NT_033044 NT_005502 NT_022539 NT_022464 NT_005580
NT_033049 NT_005498 NT_006036 NT_005825 NT_029949 NT_005991 NT_005585 NT_022567
NT_028129 NT_005990 NT_030623 NT_022439 NT_006014 NT_033032 NT_005986 NT_033015
NT_033038 NT_022552 NT_005787 NT_033040 NT_022481 NT_005607 NT_033026 NT_005999
NT_005531 NT_022473 NT_022423 NT_005510 NT_022510 NT_022665 NT_028127 NT_022400
NT_005530 NT_029258 NT_022442 NT_005769 NT_005526 NT_022540 NT_022717 NT_005644
NT_022446 NT_005583 NT_033034 NT_005882 NT_033036 NT_022419 NT_006031 NT_022551
NT_022459 NT_033029 NT_022713 NT_022460 NT_033011 NT_022554 NT_022720 NT_005684
NT_005663 NT_033018 NT_022420 NT_033043 NT_022642 NT_005791 NT_022452 NT_022435
NT_033028 NT_022497 NT_022625 NT_005568 NT_022401 NT_033031 NT_026983 NT_022475
NT_033037 NT_022451 NT_005509 NT_005527 NT_033050 NT_030634 NT_033041 NT_005863
NT_022454 NT_022607 NT_022453 NT_025670 NT_030622 NT_033045 NT_022728 NT_031768
NT_019350 NT_022434 NT_029256 NT_022405 NT_022569 NT_006042 NT_022484 NT_005795
NT_015150 NT_022445 NT_030625 NT_005532 NT_029269 NT_022455 NT_029931 NT_033022
NT_029257 NT_005513 NT_005994 NT_030635 NT_022411 NT_005824 NT_033021 NT_005543
NT_005588 NT_006029 NT_022513 NT_005523 NT_033014 NT_006025 NT_022404 NT_005823
NT_033019 NT_022393 NT_025663 NT_005567 NT_030630 NT_005969 NT_033051 NT_025664
NT_005655 NT_022503 NT_022632 NT_033024 NT_022416 NT_022432 NT_033020 NT_033035
NT_033042 NT_005832 NT_022502 NT_005772 NT_019358 NT_005591 NT_005775 NT_022616
NT_005540 NT_029939 NT_005616 NT_005539 NT_022555 NT_005849 NT_005657 NT_005678
NT_005846 NT_005612 NT_033030 NT_022463 NT_022594 NT_022449 NT_022421 NT_005744
NT_022565 NT_022518 NT_005638 NT_022397 NT_022700 NT_022422 NT_025667 NT_033052
NT_022472 NT_033033 NT_022526 NT_022674 NT_022458 NT_022509 NT_005635 NT_033053
NT_005950 NT_022396 NT_005952 NT_022406 NT_022676 NT_029253 NT_030638 NT_005910
NT_022549 NT_033009 NT_005911 NT_005962 NT_031766 NT_005883 NT_005501 NT_005571
NT_033017 NT_033013 NT_029928 NT_033010 NT_005834 NT_005535 NT_033012 NT_033016
NT_022508


  NT_005823
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005823AC0341601356822751          
S/G/Y/R/B/O NT_005823AC0930061356940221          
S/G/Y/R/B/O NT_005823AC0234381357964081RH415703461.86    1 AC023438
S/G/Y/R/B/O NT_005823AC0234381357981431RH802683461.13    1 AC023438
S/G/Y/R/B/O NT_005823AC0693471358463111          
S/G/Y/R/B/O NT_005823AC0971051358636141          
S/G/Y/R/B/O NT_005823AC0690921358910621          
S/G/Y/R/B/O NT_005823AC0258941359352571          
S/G/Y/R/B/O NT_005823AL1365041360517043          
S/G/Y/R/B/O NT_005823AC0557331361625553RH121023461.43    1AC069092, AL136504, AC055733, AC069092, AL136504
S/G/Y/R/B/O NT_005823AC0557331361778003RH913023461.33    1AC069092, AL136504, AC025148, AC055733, AC069092, AL136504
S/G/Y/R/B/O NT_005823AC0557331361901393RH250693461.86    1AC069092, AL136504, AC025148, AC055733, AC069092, AL136504
S/G/Y/R/B/O NT_005823AC0557331361901803RH119053461.43    1 AC025148
S/G/Y/R/B/O NT_005823AC0557331362181663RH458973461.43    1AL136504, AC025148, AC055733, AL136504
S/G/Y/R/B/O NT_005823AC0557331362316233RH787273461.18    1 AC025148
S/G/Y/R/B/O NT_005823AC0557331362316933RH119353461.23    1AL136504, AC025148, AC055733, AL136504
S/G/Y/R/B/O NT_005823AC1164241362954813RH54463461.33    1 AC025148, AC116424
S/G/Y/R/B/O NT_005823AC1164241362954813D3S1587    3590.101 AC025148, AC116424
S/G/Y/R/B/O NT_005823AC1164241362955013RH30066  36499.00  1 AC025148, AC116424
S/G/Y/R/B/O NT_005823AC0648391363741191RH583783461.43  3571.901AC083908, AC064839, AC083908
S/G/Y/R/B/O NT_005823AC0648391363743841RH778383462.77    1AC083908, AC064839, AC083908
S/G/Y/R/B/O NT_005823AC0839081363763391          
S/G/Y/R/B/O NT_005823AC0930041364926053          
S/G/Y/R/B/O NT_005823AC1126461366517391          
S/G/Y/R/B/O NT_005823AC0102101367716013RH464493463.09    1AC108732, AC010210, AC108732
S/G/Y/R/B/O NT_005823AC0102101367720583RH414573463.09    1AC108732, AC010210, AC108732
S/G/Y/R/B/O NT_005823AC0102101367853733RH922183463.09    1AC108732, AC010210, AC108732
S/G/Y/R/B/O NT_005823AC0102101367935733RH416693463.72    1AC108732, AC010210, AC108732
S/G/Y/R/B/O NT_005823AC0102101367936833RH790853463.09    2AC108732, AC108732, AC010210, AC010210, AC108732, AC108732
S/G/Y/R/B/O NT_005823AC0102101368051763RH656603463.09    1AC108732, AC010210, AC108732
S/G/Y/R/B/O NT_005823AC0102101368058653RH589063463.09    1AC108732, AC010210, AC108732
S/G/Y/R/B/O NT_005823AC0102101368058653WI-14631    3593.401AC108732, AC010210, AC108732
S/G/Y/R/B/O NT_005823AC0102101368079693RH488663463.09    1 AC010210
S/G/Y/R/B/O NT_005823AC0102101368082993RH687463463.09    1AC108732, AC010210, AC108732
S/G/Y/R/B/O NT_005823AC0102101368083773RH583033462.39  3585.701AC108732, AC010210, AC108732
S/G/Y/R/B/O NT_005823AC0102101368083773RH33510  36515.00  1AC108732, AC010210, AC108732
S/G/Y/R/B/O NT_005823AC0102101368090373RH790853463.09    2AC108732, AC108732, AC010210, AC010210, AC108732, AC108732
S/G/Y/R/B/O NT_005823AC0102101368105323RH1023453463.72    1AC108732, AC010210, AC108732
S/G/Y/R/B/O NT_005823AC1087321368110811          
S/G/Y/R/B/O NT_005823AC0269061368134801          
S/G/Y/R/B/O NT_005823AC1070271368784651          
S/G/Y/R/B/O NT_005823AC0237571370197911WI-6248    3577.901 AC023757
S/G/Y/R/B/O NT_005823AC0237571370197911RH579593472.76    1 AC023757
S/G/Y/R/B/O NT_005823AC0237571370209431RH581053471.90    1AC107027, AC023757, AC107027
S/G/Y/R/B/O NT_005823AC0237571370209431WI-6881    3592.201AC107027, AC023757, AC107027
S/G/Y/R/B/O NT_005823AC0237571370209661RH669773467.39    1AC107027, AC023757, AC107027
S/G/Y/R/B/O NT_005823AC0237571370340571RH992433463.72    1AC107027, AC023757, AC107027
S/G/Y/R/B/O NT_005823AC0237571371598041RH265833461.86    1AC107027, AC023757, AC107027
S/G/Y/R/B/O NT_005823AC0237571371696391RH416923463.72    1AC107027, AC023757, AC107027
S/G/Y/R/B/O NT_005823AC0237571371696411RH581983463.72    1AC107027, AC023757, AC107027


  NT_005823 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005823AC0237571371696411WI-9036    3595.901AC107027, AC023757, AC107027
S/G/Y/R/B/O NT_005823AC0237571371698611RH581063462.98    1AC107027, AC107027
S/G/Y/R/B/O NT_005823AC0237571371698611WI-19202    3591.101AC107027, AC107027
S/G/Y/R/B/O NT_005823 - RH588753461.92    0AL449209, AL449209
S/G/Y/R/B/O NT_005823 - RH30080  36329.00  1AC016919, AC026832, AC092980, AC016919, AC026832, AC092980
S/G/Y/R/B/O NT_005823 - WI-12317    3579.702AC087742, AC108728, AC108742, AC087742, AC108728, AC108742
S/G/Y/R/B/O NT_005823 - RH923503461.43    0AC093004, AC112646, AC093004, AC112646
S/G/Y/R/B/O NT_005823 - WI-20334    3581.801AC010207, AC026117, AC010207, AC026117
S/G/Y/R/B/O NT_005823 - SGC32004    3587.101AC010207, AC026117, AC010207, AC026117
S/G/Y/R/B/O NT_005823 - CHLC.GATA64C03    3587.201AC009896, AC009896
S/G/Y/R/B/O NT_005823 - WI-3311    3587.201AC068435, AC108744, AC068435, AC108744