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  Chromosome 17 - RH Maps - Single Contig
 

Chromosome 17 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_024972 NT_033293 NT_010692 NT_033294 NT_033299 NT_010823 NT_024857 NT_010676
NT_024862 NT_010718 NT_030843 NT_010700 NT_010808 NT_010799 NT_010736 NT_033298
NT_010647 NT_010844 NT_024901 NT_010840 NT_010795 NT_024897 NT_010755 NT_010765
NT_010748 NT_033295 NT_010733 NT_010783 NT_033296 NT_010689 NT_010704 NT_029467
NT_033297 NT_010775 NT_010711 NT_024866 NT_030163 NT_010672 NT_010677 NT_033292
NT_010641 NT_010843 NT_010664 NT_024915 NT_010661 NT_024871 NT_025911 NT_010845
NT_010663


  NT_010692
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010692AC0901654634861          
S/G/Y/R/B/O NT_010692AC0973704932751          
S/G/Y/R/B/O NT_010692U535835020183          
S/G/Y/R/B/O NT_010692AC0902825426653          
S/G/Y/R/B/O NT_010692AC0874986782881          
S/G/Y/R/B/O NT_010692AC0678556853843          
S/G/Y/R/B/O NT_010692AF0520417807773          
S/G/Y/R/B/O NT_010692AC0251258038683RH1036891741.72    1AC087498, AC090165, AF052041, AC007194, AC023106, AC024194, AC025125, AC087498, AC090165, AF052041, AF095725, U78308
S/G/Y/R/B/O NT_010692AC0251258067673RH708641742.85    1AC087498, AC090165, AF052041, AC023106, AC024194, AC025125, AC087498, AC090165, AF052041, AF095725, U78308, U78308
S/G/Y/R/B/O NT_010692AC0251258498463RH92507175.93    1AC090165, AC007194, AC024194, AC025125, AC090165, U76377
S/G/Y/R/B/O NT_010692AC0251259086423RH179061737.24    1 AC025125
S/G/Y/R/B/O NT_010692AC0251259088503RH393261737.24    1 AC025125
S/G/Y/R/B/O NT_010692AC0277969451371          
S/G/Y/R/B/O NT_010692AC0270409714141          
S/G/Y/R/B/O NT_010692AF1687879753523RH942161739.58    1AC027040, AC027796, AC027040, AC027796, AF168787
S/G/Y/R/B/O NT_010692AF16878710114173RH552001741.7217240.001741.001AC027040, AC027796, AC027040, AC027796, AF112441, AF168787
S/G/Y/R/B/O NT_010692AF16878710114263RH32840  17245.00  1AC027040, AC027796, AC027040, AC027796, AF112441, AF168787
S/G/Y/R/B/O NT_010692AF16878710115673RH393941739.58    1AC027040, AC027796, AC027040, AC027796, AF112441, AF168787
S/G/Y/R/B/O NT_010692AF16878710709653RH925591741.30    1AC027040, AC027796, AC027040, AC027796, AF112442, AF168787
S/G/Y/R/B/O NT_010692AF16878710725683RH266251743.10    1AC027040, AC027040, AF168787
S/G/Y/R/B/O NT_010692AF16878710789603RH33700  17230.00  1AC011189, AC027040, AC011189, AC027040, AF168787
S/G/Y/R/B/O NT_010692AF16878710790313RH786181742.57    1AC011189, AC027040, AC011189, AC027040, AF168787
S/G/Y/R/B/O NT_010692AF16878710829053RH74591  17242.00  1AC011189, AC027040, AC011189, AC027040, AF168787
S/G/Y/R/B/O NT_010692AF16878710829183WI-20223    1741.401AC011189, AC027040, AC011189, AC027040, AF168787
S/G/Y/R/B/O NT_010692AF16878710829463SGC31971    1741.101AC011189, AC027040, AC011189, AC027040, AF168787
S/G/Y/R/B/O NT_010692AF16878710829763RH393901735.11    1AC027040, AC027040, AF168787
S/G/Y/R/B/O NT_010692AF16878711228353RH549571742.85  1743.101AC011189, AC002993, AC011189, AF168787
S/G/Y/R/B/O NT_010692AF16878711228693RH13985  17250.00  1AC011189, AC002993, AC011189, AF168787
S/G/Y/R/B/O NT_010692AF16878711376753RH489471743.17    1AC011189, AC002993, AC011189, AF168787
S/G/Y/R/B/O NT_010692AF16878711714603CHLC.GAAT2C03    1740.601 AC002993
S/G/Y/R/B/O NT_010692AC01118917449801RH54933178.29  1752.801 AC002993, AC011189
S/G/Y/R/B/O NT_010692AC01118917451131RH552881742.99  1743.101 AC002993, AC011189
S/G/Y/R/B/O NT_010692AC01118917496671RH393281737.24    1 AC002993, AC011189
S/G/Y/R/B/O NT_010692AC01118917545421RH550421739.97  1740.601 AC002993
S/G/Y/R/B/O NT_010692AC01579912793891WI-11159    1739.001 AC015799
S/G/Y/R/B/O NT_010692AC01579912829761RH393071734.20    1 AC015799
S/G/Y/R/B/O NT_010692AC01579912830301RH161611734.41    1 AC015799
S/G/Y/R/B/O NT_010692AC00569613359903RH31390  17158.00  1 AC005696
S/G/Y/R/B/O NT_010692AC00569613379383RH55151175.0617170.001741.201 AC005696
S/G/Y/R/B/O NT_010692AC00569613472473RH929991734.69    1 AC005696
S/G/Y/R/B/O NT_010692AC00569613633833RH551601734.92  1739.101 AC005696, U72342
S/G/Y/R/B/O NT_010692AC00569613656913RH126021742.85    1 AC005696, U72342
S/G/Y/R/B/O NT_010692AC00569613661533RH8923  17177.00  1 AC005696, U72342
S/G/Y/R/B/O NT_010692AC00569614010693WI-9926    1740.601 AC005696
S/G/Y/R/B/O NT_010692AC00231614830643          
S/G/Y/R/B/O NT_010692AC01592115554341          
S/G/Y/R/B/O NT_010692AC00594017649693RH552841737.14  1741.001AC011189, AC002993, AC005940, AC011189
S/G/Y/R/B/O NT_010692AC00594018031663RH551331742.8517257.001745.301AC011189, AC002993, AC005940, AC011189
S/G/Y/R/B/O NT_010692AC00594018032213RH168611737.24    1AC011189, AC002993, AC005940, AC011189
S/G/Y/R/B/O NT_010692AC00594018402783RH394401734.82    1 AC005940, AF078925


  NT_010692 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010692AC00594018404433RH759971739.16    1 AC005940, AF078925
S/G/Y/R/B/O NT_010692AC00594018499013RH427121737.2417264.00  1 AC005940
S/G/Y/R/B/O NT_010692AC00594018541653RH550151742.99  1741.201 AC005940
S/G/Y/R/B/O NT_010692AC00594018674303RH126191739.58    1 AC005940, Y15730, Z69880
S/G/Y/R/B/O NT_010692AC06781519472823RH55224170.00  1753.901AC084853, AC067815, AC084853
S/G/Y/R/B/O NT_010692AC06781519651173RH180351737.24    1AC084853, AC087292, AC019150, AC067815, AC084853, AC087292
S/G/Y/R/B/O NT_010692AC06781519660843RH14922  17264.00  1AC087292, AC019150, AC067815, AC087292
S/G/Y/R/B/O NT_010692AC08485319953671          
S/G/Y/R/B/O NT_010692AC08729231696631RH1030731739.58    1AC012479, AC087742, AC012479, AC019150, AC087292, AC087742
S/G/Y/R/B/O NT_010692AC08729231718441RH37854  17242.00  1AC012479, AC087742, AC012479, AC087292, AC087742
S/G/Y/R/B/O NT_010692AC08729231787441RH1030161739.58    1AC012479, AC087742, AC012479, AC019150, AC087292, AC087742
S/G/Y/R/B/O NT_010692AC00643521562213RH551741724.58  1740.401 AC006435
S/G/Y/R/B/O NT_010692AC00643521579303RH486581733.68    1 AC006435
S/G/Y/R/B/O NT_010692AC00643521878473RH55130176.26  1744.301 AC006435, AC021705
S/G/Y/R/B/O NT_010692AC00643521913733RH32062  17170.00  1 AC006435, AC021705
S/G/Y/R/B/O NT_010692AC00643521914513RH419341732.32    1 AC006435, AC021705
S/G/Y/R/B/O NT_010692AC00643521914803RH917811732.27    1 AC006435, AC021705
S/G/Y/R/B/O NT_010692AL13703922471752RH548901724.58  1732.901 AC021705, AL137039, AL450226
S/G/Y/R/B/O NT_010692AL13703922481692RH479131731.48    1 AC021705, AL137039, AL450226
S/G/Y/R/B/O NT_010692AL13703922482962RH549841717.65  1742.001 AC021705, AL137039, AL450226
S/G/Y/R/B/O NT_010692AL13703922486082RH675061730.15    1 AC021705, AL137039, AL450226
S/G/Y/R/B/O NT_010692AL13703922496782RH551391724.58  1734.601 AC021705, AL137039, AL450226
S/G/Y/R/B/O NT_010692AC09061724004091RH360981726.01    1 AC025250, AC090617
S/G/Y/R/B/O NT_010692AC09061724703591RH393511724.48    1AL137038, AC025250, AC090617, AL137038
S/G/Y/R/B/O NT_010692AC09061725093171RH80072178.51    1AL137038, AC025250, AC090617, AL137038
S/G/Y/R/B/O NT_010692AC09061725123191RH549721718.90  1740.501AL137038, AC025250, AC090617, AL137038
S/G/Y/R/B/O NT_010692AC09061725129371RH792171717.65    1AL137038, AC025250, AC090617, AL137038, L41919
S/G/Y/R/B/O NT_010692AL13703825284193RH55018176.15  1741.501AC090617, AC025250, AC090617, AL137038
S/G/Y/R/B/O NT_010692AL13703825285313RH780321724.28    1AC090617, AC025250, AC090617, AL137038
S/G/Y/R/B/O NT_010692AL13703825289963RH183991728.02    1AC090617, AC025250, AC090617, AL137038
S/G/Y/R/B/O NT_010692AC09968425518101RH76610174.29    1AL137038, AC099684, AL137038
S/G/Y/R/B/O NT_010692AC09968425650161RH744271727.92    1 AC099684
S/G/Y/R/B/O NT_010692AC09968426730791RH552561718.90  1740.901AC007873, AC007873
S/G/Y/R/B/O NT_010692AC09968426744451RH185021725.20    1AC007873, AC007873, AC099684
S/G/Y/R/B/O NT_010692AC09968426746021RH932141725.77    1 AC099684
S/G/Y/R/B/O NT_010692AC09968426746811RH103781725.91    1AC007873, AC007873, AC099684
S/G/Y/R/B/O NT_010692AC09968426750421RH177231725.91    1AC007873, AC007873, AC099684
S/G/Y/R/B/O NT_010692AC00787326532161RH800871728.02    1AC099684, AC007873, AC099684
S/G/Y/R/B/O NT_010692AC00787332905471RH688511710.91    2AC099721, AC007873, AC099721
S/G/Y/R/B/O NT_010692AC00787332905471RH760171724.52    2AC099721, AC007873, AC099721
S/G/Y/R/B/O NT_010692AC00787333024101RH32330  1779.00  2 AC007873
S/G/Y/R/B/O NT_010692AC00787333024361RH158621725.20    2AC099721, AC007873, AC099721
S/G/Y/R/B/O NT_010692AC00787333024531RH159481724.48    2AC099721, AC007873, AC099721
S/G/Y/R/B/O NT_010692AC01585327458753RH550881712.86    1 AC015853
S/G/Y/R/B/O NT_010692AC01585327458753WI-14673    170.001 AC015853
S/G/Y/R/B/O NT_010692AC01585327458993RH118751720.38    1 AC015853
S/G/Y/R/B/O NT_010692AC01585327471663RH261641718.59    1 AC015853
S/G/Y/R/B/O NT_010692AC01585327511563RH393691717.13    1 AC015853
S/G/Y/R/B/O NT_010692AC01585327636773RH134501714.27170.00  1 AC015853
S/G/Y/R/B/O NT_010692AC02745529271641RH80070173.62    1AC008087, AC008087, AC027455, AF258545, AF258547


  NT_010692 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010692AC02745529694551RH185451722.47    1AC008087, AC025743, AC008087, AC025743, AC027455, AF258545, AF258547
S/G/Y/R/B/O NT_010692AC02745529730201CHLC.GTAT1A05    1724.701AC008087, AC025743, AC008087, AC025743, AC027455, AF258545, AF258547
S/G/Y/R/B/O NT_010692AC00808729757943          
S/G/Y/R/B/O NT_010692AC01247931115151RH581073486.24  3579.702AC087742, AC108728, AC108742, AC087742, AC108728, AC108742
S/G/Y/R/B/O NT_010692AC08774230423141RH671071737.14    1AC012479, AC012479, AC087742
S/G/Y/R/B/O NT_010692AC08774230640031RH392811741.09    1AC012479, AC012479, AC087742
S/G/Y/R/B/O NT_010692AC08774230662991RH472181742.85    1AC012479, AC012479, AC087742
S/G/Y/R/B/O NT_010692AC09972132518761RH992811724.48    1 AC099721
S/G/Y/R/B/O NT_010692AC09972132542631RH552551724.28  1740.401U29953, AC099721, U29953
S/G/Y/R/B/O NT_010692AC09972132765361RH688511710.91    2AC007873, AC007873, AC099721
S/G/Y/R/B/O NT_010692AC09972132765361RH760171724.52    2AC007873, AC007873, AC099721
S/G/Y/R/B/O NT_010692AC09972133207511RH32330  1779.00  2AC007873, AC007873
S/G/Y/R/B/O NT_010692AC09972133207741RH158621725.20    2AC007873, AC007873, AC099721
S/G/Y/R/B/O NT_010692AC09972133207911RH159481724.48    2AC007873, AC007873, AC099721
S/G/Y/R/B/O NT_010692AC09972133473251RH551251717.65  1740.801 AC099721
S/G/Y/R/B/O NT_010692AC09972133476831RH121311724.48    1 AC099721
S/G/Y/R/B/O NT_010692AC09972140500031RH920481724.48    1AC002093, AC002093, AC099721
S/G/Y/R/B/O NT_010692U2995332704013          
S/G/Y/R/B/O NT_010692AC00209340110301RH39398174.40    1 AC002093
S/G/Y/R/B/O NT_010692AC00209340155531RH747991724.48    1AC068936, AC002093, AC068936
S/G/Y/R/B/O NT_010692AC00640534105781RH1027471719.67    1AC002093, AC068936, AC002093, AC006405, AC068936
S/G/Y/R/B/O NT_010692AC00640534204651RH393961722.47    1AC002093, AC068936, AF322450, AC002093, AC006405, AC068936, AF322450
S/G/Y/R/B/O NT_010692AC00640534204661RH552981722.57  1728.001AC002093, AC068936, AF322450, AC002093, AC006405, AC068936, AF322450
S/G/Y/R/B/O NT_010692AC00640534234341RH929321722.57    1AC002093, AC068936, AF322450, AC002093, AC006405, AC068936, AF322450
S/G/Y/R/B/O NT_010692AC00640534255531RH671491722.37    1AC002093, AC068936, AF322450, AC002093, AC006405, AC068936, AF322450
S/G/Y/R/B/O NT_010692AC00640536980921RH553331722.37  1725.801 AC006405
S/G/Y/R/B/O NT_010692AC00640536989781RH551651718.64  1726.501AC068936, AF322450, AC006405, AC068936, AF322450
S/G/Y/R/B/O NT_010692AC00640536991711RH257911720.45    1AC068936, AF322450, AC006405, AC068936, AF322450
S/G/Y/R/B/O NT_010692AC00640538143861RH709531724.48    1  
S/G/Y/R/B/O NT_010692AC06893636754491RH54947178.191760.001740.701AC006405, AF322450, AC006405, AC068936, AF322450
S/G/Y/R/B/O NT_010692AC06893636754591RH14944  1755.00  1 AC068936
S/G/Y/R/B/O NT_010692AC06893636757751RH100531722.37    1AC006405, AF322450, AC006405, AC068936, AF322450
S/G/Y/R/B/O NT_010692AC06893636758571RH256551722.47    1AC006405, AF322450, AC006405, AC068936, AF322450
S/G/Y/R/B/O NT_010692AC02574334600311RH552011717.23  1723.901AC027455, AC027455, AC025743, AC027455, AC027455
S/G/Y/R/B/O NT_010692AC02574334600311RH672  174.00  1AC027455, AC027455, AC025743, AC027455, AC027455
S/G/Y/R/B/O NT_010692AC08739234754181RH1023461722.47    1AC025743, AC025743, AC087392, AF258545
S/G/Y/R/B/O NT_010692AC08739234876391RH1022761722.47    1AC025743, AC025743, AC087392, AF258545, AF322447
S/G/Y/R/B/O NT_010692AC08739234967901RH1025181722.47    1AC025743, AC025743, AC087392, AF258545
S/G/Y/R/B/O NT_010692AC08739235163561RH392861722.47    1AC025743, AC025743, AC087392, AF258545
S/G/Y/R/B/O NT_010692AC08739235255621RH919241722.47    1AC025743, AC025743, AC087392
S/G/Y/R/B/O NT_010692AC08739235291651RH462481716.27    1AC025743, AC025743, AC087392, AF322447
S/G/Y/R/B/O NT_010692AC08739235325711RH552521724.481739.001724.601AC025743, AC025743, AC087392
S/G/Y/R/B/O NT_010692AC08739236444201WI-10854    1724.001AC036164, AC036164, AC087392
S/G/Y/R/B/O NT_010692AC03616437303591RH551861722.471728.001724.701AC015884, AF322455, AC015884, AC036164, AF322455
S/G/Y/R/B/O NT_010692AC03616437320661RH550091720.45  1725.101AC015884, AF322455, AC015884, AC036164, AF322455
S/G/Y/R/B/O NT_010692AF32245037038951          
S/G/Y/R/B/O NT_010692AC01588437863831RH47611177.01    1AC036164, AF322455, AC015884, AC021806, AC036164, AF322455
S/G/Y/R/B/O NT_010692AF32245538577391          
S/G/Y/R/B/O NT_010692AC01629239454261RH461661720.45    1AC107911, AC016292, AC107911
S/G/Y/R/B/O NT_010692AF32244938905161          


  NT_010692 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010692AC10791139686482RH744261722.47    1AC016292, AC016292, AC107911
S/G/Y/R/B/O NT_010692 - RH1023161724.79    0  
S/G/Y/R/B/O NT_010692 - WI-14953    1741.201AC004771, AC032038, AC004771, AC032038
S/G/Y/R/B/O NT_010692 - RH1033041719.97    0  
S/G/Y/R/B/O NT_010692 - RH911231717.23    1AC025071, AC025071, AC025071, AC025071
S/G/Y/R/B/O NT_010692 - RH116061718.53    1AC108004, AC108004, AF322454
S/G/Y/R/B/O NT_010692 - RH116721722.47    0  
S/G/Y/R/B/O NT_010692 - RH125361720.38    0  
S/G/Y/R/B/O NT_010692 - RH173631724.48    1AC032044, AC032044
S/G/Y/R/B/O NT_010692 - RH183451742.11    0AC027820, AC091153, AC027820, AC091153
S/G/Y/R/B/O NT_010692 - RH183771719.84    1AC025071, AC032044, AC025071, AC032044
S/G/Y/R/B/O NT_010692 - RH28435171.49    0AC005696, AC005696
S/G/Y/R/B/O NT_010692 - RH366181717.13    0  
S/G/Y/R/B/O NT_010692 - RH392971742.25    0  
S/G/Y/R/B/O NT_010692 - RH393021718.53    1AF240580, AF240580
S/G/Y/R/B/O NT_010692 - RH393911722.37    1AC025071, AC025071, AC032044, AC025071, AC025071, AC032044
S/G/Y/R/B/O NT_010692 - RH393921739.78    0  
S/G/Y/R/B/O NT_010692 - RH394161724.28    0  
S/G/Y/R/B/O NT_010692 - RH41847170.69    0  
S/G/Y/R/B/O NT_010692 - RH471351711.02    1AC025071, AC025071, AC032044, AC025071, AC025071, AC032044
S/G/Y/R/B/O NT_010692 - RH482581734.69    0  
S/G/Y/R/B/O NT_010692 - RH550861719.57    1AF240580, AF240580
S/G/Y/R/B/O NT_010692 - RH55111171.94    1AC004771, AC032038, AC109333, AC004771, AC032038, AC109333
S/G/Y/R/B/O NT_010692 - RH552141717.23  1741.301AP000832, AP000843, AP000912, AP000832, AP000843, AP000912
S/G/Y/R/B/O NT_010692 - SGC31613    1743.101AC004771, AC032038, AC109333, AC004771, AC032038, AC109333
S/G/Y/R/B/O NT_010692 - WI-5436    1748.800AC097370, AC007194, AC097370, U53930
S/G/Y/R/B/O NT_010692 - RH552771720.381713.00  0  
S/G/Y/R/B/O NT_010692 - RH65750171.60    2AC022285, AC025590, AC022285, AC025590
S/G/Y/R/B/O NT_010692 - RH686881724.28    0  
S/G/Y/R/B/O NT_010692 - RH746961720.14    1AC108004, AF240580, AC108004, AF240580
S/G/Y/R/B/O NT_010692 - RH807681722.57    1AF240580, AF240580
S/G/Y/R/B/O NT_010692 - RH99901743.17    0 AC015727