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  Chromosome 17 - RH Maps - Single Contig
 

Chromosome 17 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_024972 NT_033293 NT_010692 NT_033294 NT_033299 NT_010823 NT_024857 NT_010676
NT_024862 NT_010718 NT_030843 NT_010700 NT_010808 NT_010799 NT_010736 NT_033298
NT_010647 NT_010844 NT_024901 NT_010840 NT_010795 NT_024897 NT_010755 NT_010765
NT_010748 NT_033295 NT_010733 NT_010783 NT_033296 NT_010689 NT_010704 NT_029467
NT_033297 NT_010775 NT_010711 NT_024866 NT_030163 NT_010672 NT_010677 NT_033292
NT_010641 NT_010843 NT_010664 NT_024915 NT_010661 NT_024871 NT_025911 NT_010845
NT_010663


  NT_010799
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010799AC015751287417721          
S/G/Y/R/B/O NT_010799AC027233287573053          
S/G/Y/R/B/O NT_010799AC025898288948553          
S/G/Y/R/B/O NT_010799AC008133289988093          
S/G/Y/R/B/O NT_010799AC003687292828113D17S798    17281.201 AC003687
S/G/Y/R/B/O NT_010799AC003687292828113RH1331417284.76171765.00  1 AC003687
S/G/Y/R/B/O NT_010799AC003687293047603RH9376117284.76    1AC084809, AC090555, AC003687, AC084809, AC090555
S/G/Y/R/B/O NT_010799AC003687293047733RH6957617283.96    2AC084809, AC090555, AL049873, AL049873, AC003687, AC084809, AC090555, AL049873, AL049873
S/G/Y/R/B/O NT_010799AC084809293145541          
S/G/Y/R/B/O NT_010799AC090555293995391          
S/G/Y/R/B/O NT_010799AC007982294225981          
S/G/Y/R/B/O NT_010799AC008106294528011          
S/G/Y/R/B/O NT_010799AC087493294844563          
S/G/Y/R/B/O NT_010799AC025211295646733RH1549617283.96    1AC007982, AC008106, AC007982, AC008106, AC025211
S/G/Y/R/B/O NT_010799AC002119297007523RH14290  171750.00  1AC079336, AC002119, AC079336
S/G/Y/R/B/O NT_010799AC002119297586073RH1633217283.18    1AC079336, AC002119, AC079336
S/G/Y/R/B/O NT_010799AC002119297603283RH2574817283.18    1AC079336, AC002119, AC079336
S/G/Y/R/B/O NT_010799AC002119297608873RH999317283.13    1AC079336, AC002119, AC079336
S/G/Y/R/B/O NT_010799AC002119297628703RH6680217271.46    1AC079336, AC002119, AC079336
S/G/Y/R/B/O NT_010799AC002119297681563RH5497517283.13  17305.201AC079336, AC002119, AC079336
S/G/Y/R/B/O NT_010799AC079336297687451          
S/G/Y/R/B/O NT_010799AC005899298075563RH7880117283.13    1AC079336, AC005899, AC079336
S/G/Y/R/B/O NT_010799AC005899298373333RH4782717283.13    1 AC005899
S/G/Y/R/B/O NT_010799AC005899298640373RH3637117281.97    1  
S/G/Y/R/B/O NT_010799AC005899298700123RH9311517281.97    1 AC005899
S/G/Y/R/B/O NT_010799AC005899298728493RH10346217281.97    1 AC005899
S/G/Y/R/B/O NT_010799AC005899298742393RH7791317275.54    1 AC005899
S/G/Y/R/B/O NT_010799AC005899298782313RH9847617268.21    1 AC005899
S/G/Y/R/B/O NT_010799AC005899299199533RH1840717277.73    1AC026620, AC005899, AC026620
S/G/Y/R/B/O NT_010799AC005899299200483RH982117279.06    1AC026620, AC005899, AC026620
S/G/Y/R/B/O NT_010799AC005899299232393RH5518717278.76171741.0017303.801AC026620, AC005899, AC026620
S/G/Y/R/B/O NT_010799AC005899299271763RH5509917280.88  17305.301AC026620, AC005899, AC026620
S/G/Y/R/B/O NT_010799AC015941300446141RH9332117280.88    1AC021852, AC026620, AC015941, AC021852, AC026620
S/G/Y/R/B/O NT_010799AC015941300446511RH8911  171746.00  1AC021852, AC026620, AC015941, AC021852, AC026620
S/G/Y/R/B/O NT_010799AC015941300472411RH5521217280.88  17306.101AC021852, AC026620, AC015941, AC021852, AC026620
S/G/Y/R/B/O NT_010799AC015941300472411RH14943  172541.00  1AC021852, AC026620, AC015941, AC021852, AC026620
S/G/Y/R/B/O NT_010799AC015941300473061RH1088117277.21    1AC021852, AC026620, AC015941, AC021852, AC026620
S/G/Y/R/B/O NT_010799AC026620300304451RH6983717280.88    1AC015941, AC021852, AC015941, AC021852, AC026620
S/G/Y/R/B/O NT_010799AC026620310442021RH14918  171738.00  1AC015941, AC021852, AC015941, AC021852, AC026620
S/G/Y/R/B/O NT_010799AC021852300527721RH1756517280.88    1AC015941, AC026620, AC015941, AC021852, AC026620
S/G/Y/R/B/O NT_010799AC021852300529561RH6759117280.88    1AC015941, AC026620, AC015941, AC021852, AC026620
S/G/Y/R/B/O NT_010799AC090616300931741RH9178317272.31    2AC005562, AC023278, AC005562, AC023278, AC090616
S/G/Y/R/B/O NT_010799AC090616300932511RH1691417277.94    1AC023278, AC023278, AC090616
S/G/Y/R/B/O NT_010799AC090616300932551RH5522517273.17  17300.002AC005562, AC023278, AC005562, AC023278, AC090616
S/G/Y/R/B/O NT_010799AC090616300939111RH7800017272.31    4AC005562, AC005562, AC011840, AC023278, AC027793, AC005562, AC005562, AC011840, AC023278, AC027793, AC090616
S/G/Y/R/B/O NT_010799AC090616300985331RH6573917267.80    2AC005562, AC011840, AC023278, AC005562, AC011840, AC023278, AC090616
S/G/Y/R/B/O NT_010799AC090616301004841RH9206717477.30    5AC005332, AC005562, AC005562, AC011840, AC023278, AC068152, AC091132, AC005332, AC005562, AC005562, AC011840, AC023278, AC068152, AC090616, AC091132
S/G/Y/R/B/O NT_010799AC090616301322871RH3939317456.88    4AC023278, AC037487, AC046170, AC069007, AC069134, AC073426, AC073990, AC091132, AC023278, AC037487, AC046170, AC069007, AC069134, AC073426, AC073990, AC090616, AC091132
S/G/Y/R/B/O NT_010799AC003041301457283RH2630717277.73    1AC023278, AC090616, AC003041, AC023278, AC090616
S/G/Y/R/B/O NT_010799AC003041301461483RH5514717267.90  17290.701AC023278, AC090616, AC003041, AC023278, AC090616


  NT_010799 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010799AC003041301617583RH4715217269.13    2AC023266, AC023278, AC090616, AC003041, AC023266, AC023278, AC090616
S/G/Y/R/B/O NT_010799AC003041301699643RH7800317267.80    1AC023266, AC023278, AC090616, AC003041, AC023266, AC023278, AC090616
S/G/Y/R/B/O NT_010799AC004253302436363RH5513417277.10171734.0017305.701 AC004253
S/G/Y/R/B/O NT_010799AC004253302436953RH3574117273.17    1 AC004253
S/G/Y/R/B/O NT_010799AC004253302530993RH2714817271.46    1 AC004253
S/G/Y/R/B/O NT_010799AC007923303305843WI-6444    17304.701AC004253, AC004253, AC007923
S/G/Y/R/B/O NT_010799AC003101304970013RH1553317280.88    1 AC019148
S/G/Y/R/B/O NT_010799AC003101305690503RH7831817279.06    1 AC003101, AC019148
S/G/Y/R/B/O NT_010799AC003101305697713RH2851217267.10    1 AC003101, AC019148
S/G/Y/R/B/O NT_010799AC003101305740323RH5522117280.88  17306.101 AC003101, AC019148
S/G/Y/R/B/O NT_010799AC003101305740333RH5530217275.00  17301.901 AC003101, AC019148
S/G/Y/R/B/O NT_010799AC003101305741183RH1090417278.96    1 AC003101, AC019148
S/G/Y/R/B/O NT_010799AC003101305741303RH13806  171714.00  1 AC003101, AC019148
S/G/Y/R/B/O NT_010799AC003101305750393RH2586817269.91    1 AC003101, AC019148
S/G/Y/R/B/O NT_010799AC004526306995613RH6935117280.88    1 AC004526
S/G/Y/R/B/O NT_010799AC004526307243883RH5508917280.88  17304.801 AC004526, L05367
S/G/Y/R/B/O NT_010799AC004526307288283RH32052  171723.00  1 AC004526, L05367
S/G/Y/R/B/O NT_010799AC004526307290133RH7810217280.88    1 AC004526, L05367
S/G/Y/R/B/O NT_010799AC004526307291803RH9156217280.88    1 AC004526, L05367
S/G/Y/R/B/O NT_010799AC004526307304463RH1839217277.73    1 AC004526, L05367
S/G/Y/R/B/O NT_010799AC004526307320263RH5496517273.17  17300.501 AC004526, L05367
S/G/Y/R/B/O NT_010799AC004526307320453RH2089  171714.00  1 AC004526, L05367
S/G/Y/R/B/O NT_010799AC004526307885763RH3935617280.88    1 AC004526, L05367
S/G/Y/R/B/O NT_010799AC004526308014163RH6854817273.83    1 AC004526, L05367, M60830
S/G/Y/R/B/O NT_010799AC004526308014503RH5494017270.11  17292.701 AC004526, L05367, M60830
S/G/Y/R/B/O NT_010799AC004526308022183RH5494917277.00  17304.101 AC004526, L05367, M60830
S/G/Y/R/B/O NT_010799AC004526308025793RH1771117280.88    1 AC004526, L05367, M60830
S/G/Y/R/B/O NT_010799AC004526308116423RH1772417277.10    1 AC004526, L05367, X57436
S/G/Y/R/B/O NT_010799AC004526308836953RH5521717271.36  17303.401AC079915, AC004222, AC004526, AC079915
S/G/Y/R/B/O NT_010799AC079915309260403          
S/G/Y/R/B/O NT_010799AC027793316793641RH7800017272.31    4AC005562, AC005562, AC011840, AC023278, AC090616, AC005562, AC005562, AC011840, AC023278, AC027793, AC090616
S/G/Y/R/B/O NT_010799AC027793317095931FB12A2    17304.501 AC027793
S/G/Y/R/B/O NT_010799AC011824311712112RH9384517283.54    1 AC011824
S/G/Y/R/B/O NT_010799AC024614313056413          
S/G/Y/R/B/O NT_010799AC078907314463093          
S/G/Y/R/B/O NT_010799AC024610314842223WI-4653    17301.701AC078907, AC024610, AC078907, AC090611
S/G/Y/R/B/O NT_010799AC024610315462963RH4868417287.37    1 AC024610, AC090611, AL356138
S/G/Y/R/B/O NT_010799AC103948316336893          
S/G/Y/R/B/O NT_010799AC004666317566702RH5505017275.96171703.0017305.101AC027793, AC004666, AC027793
S/G/Y/R/B/O NT_010799AC004666317754902RH33498  171707.00  1 AC004666
S/G/Y/R/B/O NT_010799AC004666317756312RH3591417274.69    1 AC004666
S/G/Y/R/B/O NT_010799AC091177318111433RH6928817272.22    1 AC091177
S/G/Y/R/B/O NT_010799AC091177318152283RH13745  171699.00  1 AC091177
S/G/Y/R/B/O NT_010799AC091177318153833RH7809317274.69    1 AC091177
S/G/Y/R/B/O NT_010799AC091177318155613RH37803  171684.00  1 AC091177
S/G/Y/R/B/O NT_010799AC091177318157573RH7833317272.31    1 AC091177
S/G/Y/R/B/O NT_010799AC023278318201271          
S/G/Y/R/B/O NT_010799 - RH1046717271.56    1AC006050, AC011840, AC006050, AC011840
S/G/Y/R/B/O NT_010799 - RH14916  171645.00  1AC006050, AC011840, AC006050, AC011840
S/G/Y/R/B/O NT_010799 - SGC44707    17289.001AC006237, AC006237, AC023247


  NT_010799 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010799 - RH2580817267.41    1AC024065, AC104984, AC024065, AC087644, AC104984
S/G/Y/R/B/O NT_010799 - RH32620  171651.00  1AC006050, AC011840, AC002317, AC006050, AC011840
S/G/Y/R/B/O NT_010799 - WI-9151    17296.501AC002482, AC002482, M57506
S/G/Y/R/B/O NT_010799 - RH3930517271.89    1AC006050, AC011840, AC006050, AC011840
S/G/Y/R/B/O NT_010799 - RH32782  171677.00  0  
S/G/Y/R/B/O NT_010799 - FB6F10    17299.201AC004147, AC004147
S/G/Y/R/B/O NT_010799 - RH3936417268.90    0AC023266, AC023266
S/G/Y/R/B/O NT_010799 - RH38247  171672.00  1AC023266, AC023266
S/G/Y/R/B/O NT_010799 - RH3939917274.47    1AC024065, AC104984, AC024065, AC087440, AC087644, AC104984
S/G/Y/R/B/O NT_010799 - RH74565  171642.00  1AC024065, AC104984, AC024065, AC087644, AC104984
S/G/Y/R/B/O NT_010799 - RH4489817272.31    0  
S/G/Y/R/B/O NT_010799 - RH4532517274.26    1AC024065, AC090685, AC024065, AC087644, AC090685
S/G/Y/R/B/O NT_010799 - RH5510117271.36  17304.601AC006050, AC002317, AC006050
S/G/Y/R/B/O NT_010799 - RH6745817272.31    1AC023266, AC023266
S/G/Y/R/B/O NT_010799 - RH6753217272.64    1AC104564, AC104564
S/G/Y/R/B/O NT_010799 - RH7005717274.47    1AC024065, AC104984, AC024065, AC087644, AC104984
S/G/Y/R/B/O NT_010799 - RH7021017273.17    1AC104982, AC104982
S/G/Y/R/B/O NT_010799 - RH7092217269.24    0AC079336, AC079336
S/G/Y/R/B/O NT_010799 - RH9172417274.36    1AC024065, AC104984, AC024065, AC087644, AC104984
S/G/Y/R/B/O NT_010799 - RH9195017273.17    0  
S/G/Y/R/B/O NT_010799 - RH9841217269.03    1AC005562, AC011840, AC105208, AC005562, AC011840, AC105208