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  Chromosome 17 - RH Maps - Single Contig
 

Chromosome 17 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_024972 NT_033293 NT_010692 NT_033294 NT_033299 NT_010823 NT_024857 NT_010676
NT_024862 NT_010718 NT_030843 NT_010700 NT_010808 NT_010799 NT_010736 NT_033298
NT_010647 NT_010844 NT_024901 NT_010840 NT_010795 NT_024897 NT_010755 NT_010765
NT_010748 NT_033295 NT_010733 NT_010783 NT_033296 NT_010689 NT_010704 NT_029467
NT_033297 NT_010775 NT_010711 NT_024866 NT_030163 NT_010672 NT_010677 NT_033292
NT_010641 NT_010843 NT_010664 NT_024915 NT_010661 NT_024871 NT_025911 NT_010845
NT_010663


  NT_010748
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010748AC008105462714411RH31784  172397.00  1 AC008105
S/G/Y/R/B/O NT_010748AC008105462962511RH14909  172424.00  1 AC008105
S/G/Y/R/B/O NT_010748AC008105462963061RH7821417329.66    1 AC008105
S/G/Y/R/B/O NT_010748AC024047463151381          
S/G/Y/R/B/O NT_010748AC087298463255632RH2679217329.93    1AC024047, AC024047, AC087298
S/G/Y/R/B/O NT_010748AC087298463278782RH9911217327.32    1AC024047, AC024047, AC087298
S/G/Y/R/B/O NT_010748AC087298463321732RH9888817325.20    1AC024047, AC024047, AC087298
S/G/Y/R/B/O NT_010748AC087298463342782RH4568117327.32    1 AC087298
S/G/Y/R/B/O NT_010748AC087298464653532RH5494117329.20  17357.501AC008105, AC024047, AC008105, AC024047, AC087298
S/G/Y/R/B/O NT_010748AC087298464653572RH1189117328.93    1AC008105, AC024047, AC008105, AC024047, AC087298
S/G/Y/R/B/O NT_010748AC002117463671433WI-13574    17356.301 AC002117
S/G/Y/R/B/O NT_010748AC002117463671433RH5522017327.39    1 AC002117
S/G/Y/R/B/O NT_010748AC002117463677863RH6660917325.70    1 AC002117
S/G/Y/R/B/O NT_010748AC002117463680263RH7032617325.50    1 AC002117
S/G/Y/R/B/O NT_010748AC002117463701733RH33188  172424.0017360.901 AC002117
S/G/Y/R/B/O NT_010748AC002117463701733RH5504817327.62    1 AC002117
S/G/Y/R/B/O NT_010748AC002117463702133RH3933917327.32    1 AC002117
S/G/Y/R/B/O NT_010748AC003963464814503RH32412  172429.0017356.401AC008105, AC024047, AC087298, AC003963, AC008105, AC024047, AC087298
S/G/Y/R/B/O NT_010748AC003963464815643RH3929517329.72    1AC008105, AC024047, AC087298, AC003963, AC008105, AC024047, AC087298
S/G/Y/R/B/O NT_010748AC003963464827613RH7490717329.87    1AC008105, AC024047, AC087298, AC003963, AC008105, AC024047, AC087298
S/G/Y/R/B/O NT_010748AC003963464879103RH1591717329.72    1AC024047, AC003963, AC024047
S/G/Y/R/B/O NT_010748AC003963464959893RH9229117329.72    1 AC003963
S/G/Y/R/B/O NT_010748AC003070466123553RH1025017330.91    1AC069007, AC091132, AC003070, AC069007, AC091132
S/G/Y/R/B/O NT_010748AC003070466135423RH5519217329.20  17357.501AC069007, AC091132, AC003070, AC069007, AC091132
S/G/Y/R/B/O NT_010748AC003070466523813RH5499717329.30  17360.801AC069007, AC091132, AC003070, AC069007, AC091132
S/G/Y/R/B/O NT_010748AC003070466539133RH4841917405.94    2AC003663, AC091132, AC003070, AC003663, AC091132
S/G/Y/R/B/O NT_010748AC091132466844271RH42841  172427.00  2AC003663, AC069007, AC003663, AC069007, AC091132
S/G/Y/R/B/O NT_010748AC091132467217701RH3934617405.94    2AC068152, AC069007, AC068152, AC069007, AC091132
S/G/Y/R/B/O NT_010748AC091132474569601RH10199817405.16    3AC005670, AC046170, AC069007, AC090419, AC005670, AC046170, AC069007, AC090419, AC091132
S/G/Y/R/B/O NT_010748AC091132474677101WI-3514    17481.604AC005829, AC037487, AC046170, AC069007, AC090419, AC005829, AC037487, AC046170, AC069007, AC090419, AC091132
S/G/Y/R/B/O NT_010748AC091132474743771RH5531417405.94  17480.703AC037487, AC046170, AC069007, AC069134, AC037487, AC046170, AC069007, AC069134, AC091132
S/G/Y/R/B/O NT_010748AC091132474859941RH3939317456.88    4AC023278, AC037487, AC046170, AC069007, AC069134, AC073426, AC073990, AC090616, AC023278, AC037487, AC046170, AC069007, AC069134, AC073426, AC073990, AC090616, AC091132
S/G/Y/R/B/O NT_010748AC069007467389361          
S/G/Y/R/B/O NT_010748AC036218467425141          
S/G/Y/R/B/O NT_010748AC048388475409131RH10310317440.75    3AC005829, AC073990, AC090419, AC005829, AC048388, AC073990, AC090419
S/G/Y/R/B/O NT_010748AC004703467731593RH10261717329.72    1AC048388, AC073426, AC004703, AC048388, AC073426
S/G/Y/R/B/O NT_010748AC004703467843983RH10355317329.20    1AC048388, AC073426, AC004703, AC048388, AC073426
S/G/Y/R/B/O NT_010748AC004703467883643RH7801017329.30    1AC048388, AC073426, AC004703, AC048388, AC073426
S/G/Y/R/B/O NT_010748AC004703468185683WI-5266    17359.101AC073426, AC004703, AC073426
S/G/Y/R/B/O NT_010748AC073426468474131          
S/G/Y/R/B/O NT_010748AC106030468626332          
S/G/Y/R/B/O NT_010748AC003662469771263RH5519617330.18172493.0017356.401AC036218, AC106030, AC003662, AC036218, AC106030
S/G/Y/R/B/O NT_010748AC003662469927853RH5491617329.20  17359.201AC036218, AC106030, AC003662, AC036218, AC106030
S/G/Y/R/B/O NT_010748AC010792470471923RH5524217330.35  17357.501 AC010792, AC091628
S/G/Y/R/B/O NT_010748AC010792470472163RH6753017330.66    1 AC010792, AC091628
S/G/Y/R/B/O NT_010748AC010792470500153RH4496917329.72    1AC036218, AC010792, AC036218, AC091628
S/G/Y/R/B/O NT_010748AC010792471260423RH1775617330.88    1 AC010792, AC091628
S/G/Y/R/B/O NT_010748AC004139471666133RH1191417332.08    1 AC091628
S/G/Y/R/B/O NT_010748AC004139471670083RH7555617332.60    1 AC004139, AC091628
S/G/Y/R/B/O NT_010748AC004139471682933RH2634217333.20    1 AC004139, AC091628


  NT_010748 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010748AC004139471683143RH4729617333.20    1 AC004139, AC091628
S/G/Y/R/B/O NT_010748AC004139471705263RH1055017333.20    1 AC004139, AC091628
S/G/Y/R/B/O NT_010748AC004139471705493RH5501117331.28  17366.001 AC004139, AC091628
S/G/Y/R/B/O NT_010748AC004139471705533RH1010817333.20    1 AC004139, AC091628
S/G/Y/R/B/O NT_010748AC004139472063183RH5522317331.08  17356.701 AC004139, AC091628
S/G/Y/R/B/O NT_010748AC004139472690333RH4558217332.08    1 AC004139
S/G/Y/R/B/O NT_010748AC004139472748133RH5500717333.20172477.0017356.701AC005829, AC004139, AC005829
S/G/Y/R/B/O NT_010748AC005829472892813RH7552717329.97    1AC073990, AC005829, AC073990
S/G/Y/R/B/O NT_010748AC005829473146723RH9355017333.20    1AC073990, AC005829, AC073990
S/G/Y/R/B/O NT_010748AC005829473388183RH9185517333.20    1AC073990, AC090419, AC005829, AC073990, AC090419
S/G/Y/R/B/O NT_010748AC005829473415443RH4856017331.99    1AC073990, AC090419, AC005829, AC073990, AC090419
S/G/Y/R/B/O NT_010748AC005829473879373RH6489911168.92    2AC048388, AC068385, AC073426, AC090419, AC005829, AC048388, AC068385, AC073426, AC090419
S/G/Y/R/B/O NT_010748AC005829474119593RH10310317440.75    3AC048388, AC073990, AC090419, AC005829, AC048388, AC073990, AC090419
S/G/Y/R/B/O NT_010748AC005829474414253WI-3514    17481.604AC037487, AC046170, AC069007, AC090419, AC091132, AC005829, AC037487, AC046170, AC069007, AC090419, AC091132
S/G/Y/R/B/O NT_010748AC090419474432511          
S/G/Y/R/B/O NT_010748AC073990475320521RH10310317440.75    3AC005829, AC048388, AC090419, AC005829, AC048388, AC073990, AC090419
S/G/Y/R/B/O NT_010748 - RH10284917333.20    1AC002558, AC002558
S/G/Y/R/B/O NT_010748 - RH10329017333.10    1AC005670, AC005670
S/G/Y/R/B/O NT_010748 - RH1328017333.10    1AC004098, AC004098
S/G/Y/R/B/O NT_010748 - RH1683217338.66    1AC006468, AC006468
S/G/Y/R/B/O NT_010748 - RH1740417337.38    1AC018521, AC018521
S/G/Y/R/B/O NT_010748 - RH1749717337.07    1AC018521, AC018521
S/G/Y/R/B/O NT_010748 - RH1788017337.70    1AC018521, AC018521
S/G/Y/R/B/O NT_010748 - RH2644917333.20    1AC002558, AC002558
S/G/Y/R/B/O NT_010748 - RH2843817335.85    1AC021211, AC040934, AC068234, AC021211, AC040934, AC068234
S/G/Y/R/B/O NT_010748 - RH3642817338.66    1AC004477, AC004477
S/G/Y/R/B/O NT_010748 - RH3647717333.20    1AC064817, AC068234, AC087649, AC064817, AC068234, AC087649
S/G/Y/R/B/O NT_010748 - RH3652317331.28    1AC015674, AC015674
S/G/Y/R/B/O NT_010748 - RH3927917337.07    1AC018521, AC018521
S/G/Y/R/B/O NT_010748 - RH3932517333.00    1AC002558, AC002558
S/G/Y/R/B/O NT_010748 - RH3933617333.10    1AC068234, AC068234, M32686
S/G/Y/R/B/O NT_010748 - RH3937017332.80    1AC068234, AC068234, M32686
S/G/Y/R/B/O NT_010748 - RH3938617337.70    1AC064817, AC068234, AC087649, AC064817, AC068234, AC087649, M32674
S/G/Y/R/B/O NT_010748 - RH3941417333.10    1AC005670, AC005670
S/G/Y/R/B/O NT_010748 - RH3943417335.61    0  
S/G/Y/R/B/O NT_010748 - RH4561617329.51    1AC068234, AC068234, M32686
S/G/Y/R/B/O NT_010748 - RH4593517336.16    2AC021211, AC040934, AC021211, AC040934
S/G/Y/R/B/O NT_010748 - RH4619617337.70    1AC002558, AC064817, AC002558, AC064817
S/G/Y/R/B/O NT_010748 - RH4711417333.20    1AC068234, AC068234, M32686
S/G/Y/R/B/O NT_010748 - RH4727417337.70    0  
S/G/Y/R/B/O NT_010748 - RH5493617330.66  17356.701AC005670, AC005670
S/G/Y/R/B/O NT_010748 - RH5494217332.90    1AC040934, AC068234, AC040934, AC068234
S/G/Y/R/B/O NT_010748 - RH5495817333.00  17356.702AC004098, AC046170, AC004098, AC046170
S/G/Y/R/B/O NT_010748 - D17S920    17356.701AC004098, AC004098
S/G/Y/R/B/O NT_010748 - RH5498017333.30  17356.701AC021211, AC040934, AC068234, AC021211, AC040934, AC068234
S/G/Y/R/B/O NT_010748 - RH5499817337.49  17356.701AC018521, AC018521
S/G/Y/R/B/O NT_010748 - D17S931    17361.001AC005670, AC005670
S/G/Y/R/B/O NT_010748 - RH5500017333.20  17361.001AC003665, AC015674, AC003665, AC015674
S/G/Y/R/B/O NT_010748 - RH5504917330.80  17361.001AC068234, AC068234
S/G/Y/R/B/O NT_010748 - RH5505517330.66  17361.001AC004098, AC004098


  NT_010748 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010748 - RH5507917333.00    1AC005670, AC005670
S/G/Y/R/B/O NT_010748 - D17S791    17361.101AC004098, AC004098
S/G/Y/R/B/O NT_010748 - WI-7460    17361.101AC015855, AC019319, AC015855, AC019319
S/G/Y/R/B/O NT_010748 - RH5509217333.20  17361.101AC015855, AC015855
S/G/Y/R/B/O NT_010748 - RH5516617333.20  17361.101AC064817, AC068234, AC087649, AC064817, AC068234, AC087649, X58854
S/G/Y/R/B/O NT_010748 - RH5518017330.80  17361.301AC002558, AC002558
S/G/Y/R/B/O NT_010748 - RH5522917329.20    1AC004596, AC004596
S/G/Y/R/B/O NT_010748 - WI-10450    17361.401AC015855, AC019319, AC015855, AC019319
S/G/Y/R/B/O NT_010748 - IB1321    17363.701AC005180, AC002557, AC005180
S/G/Y/R/B/O NT_010748 - RH5524517337.49  17366.601AC004477, AC018521, AC004477, AC018521
S/G/Y/R/B/O NT_010748 - D17S806    17369.101AC015674, AC015674
S/G/Y/R/B/O NT_010748 - WI-6680    17372.601AC018521, AC018521
S/G/Y/R/B/O NT_010748 - RH5529517333.20  17373.101AC015855, AC015855
S/G/Y/R/B/O NT_010748 - WI-16780    17373.701AC003665, AC003665
S/G/Y/R/B/O NT_010748 - RH5530317336.16  17373.801AC015936, AC015936
S/G/Y/R/B/O NT_010748 - RH6544517333.20    1AC002558, AC064817, AC002558, AC064817
S/G/Y/R/B/O NT_010748 - RH6696417332.59    1AC015674, AC025682, AC015674, AC025682
S/G/Y/R/B/O NT_010748 - RH6772117333.20    1AC021211, AC040934, AC021211, AC040934
S/G/Y/R/B/O NT_010748 - RH7072417333.10    1AC005670, AC005670
S/G/Y/R/B/O NT_010748 - RH7565317332.29    1AC009449, AC046170, AC009449, AC046170
S/G/Y/R/B/O NT_010748 - RH7571917332.50    1AC064817, AC068234, AC064817, AC068234, M32674
S/G/Y/R/B/O NT_010748 - RH7574017337.70    1AC003665, AC003665
S/G/Y/R/B/O NT_010748 - RH7811017333.20    2 AL391236, AL589868
S/G/Y/R/B/O NT_010748 - RH7831517329.25    1AC007993, AC007993, AC078837
S/G/Y/R/B/O NT_010748 - RH7922517329.25    0  
S/G/Y/R/B/O NT_010748 - RH9160917329.30    0  
S/G/Y/R/B/O NT_010748 - RH9241617336.76    1AC003665, AC003665
S/G/Y/R/B/O NT_010748 - RH9247017333.20    1AC005670, AC015855, AC005670, AC015855
S/G/Y/R/B/O NT_010748 - RH9271217331.28    1AC015674, AC015674
S/G/Y/R/B/O NT_010748 - RH9280817333.20    1AC005670, AC005670
S/G/Y/R/B/O NT_010748 - RH9291717333.40    0  
S/G/Y/R/B/O NT_010748 - RH9305217337.28    1AC004477, AC004477
S/G/Y/R/B/O NT_010748 - RH9434117329.66    0