Chromosome 17 - RH Maps - Single Contig

Chromosome 17 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_024972	NT_033293	NT_010692	NT_033294	NT_033299	NT_010823	NT_024857	NT_010676
NT_024862	NT_010718	NT_030843	NT_010700	NT_010808	NT_010799	NT_010736	NT_033298
NT_010647	NT_010844	NT_024901	NT_010840	NT_010795	NT_024897	NT_010755	NT_010765
NT_010748	NT_033295	NT_010733	NT_010783	NT_033296	NT_010689	NT_010704	NT_029467
NT_033297	NT_010775	NT_010711	NT_024866	NT_030163	NT_010672	NT_010677	NT_033292
NT_010641	NT_010843	NT_010664	NT_024915	NT_010661	NT_024871	NT_025911	NT_010845
NT_010663

NT_010795

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_010795	AC023133	37644083	1	RH55127	17	302.47					1		AC023133, AC110594
S/G/Y/R/B/O	NT_010795	AC023133	37644083	1	WI-22201					17	337.40	1		AC023133, AC110594
S/G/Y/R/B/O	NT_010795	AC023133	37644186	1	RH18449	17	298.54					1		AC023133, AC110594
S/G/Y/R/B/O	NT_010795	AC023133	37647490	1	RH11528	17	301.04					1		AC023133, AC110594
S/G/Y/R/B/O	NT_010795	AC023133	37647775	1	RH91524	17	302.47					1		AC023133, AC110594
S/G/Y/R/B/O	NT_010795	AC003042	37725448	3	RH55095	17	302.47					1		AC003042, AC110594
S/G/Y/R/B/O	NT_010795	AC003042	37725448	3	WI-16428					17	335.60	1		AC003042, AC110594
S/G/Y/R/B/O	NT_010795	AC003042	37736469	3	RH78009	17	299.25					1		AC003042, AC110594
S/G/Y/R/B/O	NT_010795	AC003042	37736532	3	RH39388	17	300.93					1		AC003042, AC110594
S/G/Y/R/B/O	NT_010795	AC003042	37763213	3	RH80910	17	300.87					1		AC003042, AC110594
S/G/Y/R/B/O	NT_010795	AC015938	37784896	1
S/G/Y/R/B/O	NT_010795	AC025882	37944836	3
S/G/Y/R/B/O	NT_010795	AC023315	38063234	3	RH48444	17	298.54					1	AC025882,	AC023315, AC025882
S/G/Y/R/B/O	NT_010795	AC023315	38078755	3	RH71201	17	302.47					1		AC023315
S/G/Y/R/B/O	NT_010795	AC003103	38192401	3	RH26426	17	302.47					1		AC003103
S/G/Y/R/B/O	NT_010795	AC003103	38192551	3	RH54944	17	298.76					1		AC003103
S/G/Y/R/B/O	NT_010795	AC003103	38192551	3	WI-11337					17	324.90	1		AC003103
S/G/Y/R/B/O	NT_010795	AC003103	38220456	3	RH55323	17	300.28					1		AC003103
S/G/Y/R/B/O	NT_010795	AC003103	38220456	3	SGC31900					17	325.70	1		AC003103
S/G/Y/R/B/O	NT_010795	AC003103	38220506	3	RH10856	17	298.97					1		AC003103
S/G/Y/R/B/O	NT_010795	AC003103	38220611	3	RH10528	17	298.97					1		AC003103
S/G/Y/R/B/O	NT_010795	AC016482	38280263	1	RH54977	17	298.10			17	324.90	1		AC016482
S/G/Y/R/B/O	NT_010795	AC016482	38280407	1	RH67275	17	299.68					1		AC016482
S/G/Y/R/B/O	NT_010795	AC016482	38329759	1	RH28428	17	302.36					1		AC016482
S/G/Y/R/B/O	NT_010795	AC016482	38332492	1	RH98496	17	300.93					1		AC016482
S/G/Y/R/B/O	NT_010795	AC016482	38355374	1	RH17508	17	300.93					1		AC016482
S/G/Y/R/B/O	NT_010795	AC007900	38379289	3
S/G/Y/R/B/O	NT_010795	AC002346	38426400	1
S/G/Y/R/B/O	NT_010795	AC068400	38434384	1	RH55093	17	300.00					1	AC002346, AC007900,	AC002346, AC007900, AC068400
S/G/Y/R/B/O	NT_010795	AC068400	38434384	1	WI-11525					17	325.70	1	AC002346, AC007900,	AC002346, AC007900, AC068400
S/G/Y/R/B/O	NT_010795	AC068447	38479423	1
S/G/Y/R/B/O	NT_010795	AC004099	38540742	3	RH93734	17	302.25					1	AC068447,	AC004099, AC068447
S/G/Y/R/B/O	NT_010795	AC004099	38541989	3	RH55118	17	303.34					1	AC068447,	AC004099, AC068447
S/G/Y/R/B/O	NT_010795	AC004099	38541989	3	WI-17824					17	332.70	1	AC068447,	AC004099, AC068447
S/G/Y/R/B/O	NT_010795	AC004099	38576937	3	RH17001	17	302.25					1		AC004099
S/G/Y/R/B/O	NT_010795	AC004099	38576959	3	RH54912	17	303.45					1		AC004099
S/G/Y/R/B/O	NT_010795	AC004099	38576959	3	WI-6523					17	335.10	1		AC004099
S/G/Y/R/B/O	NT_010795	AC004099	38576974	3	RH9960	17	300.50					1		AC004099
S/G/Y/R/B/O	NT_010795	AC004099	38580401	3	RH32362			17	1873.00	17	336.80	1		AC004099
S/G/Y/R/B/O	NT_010795	AC004099	38580472	3	RH48320	17	302.25					1		AC004099
S/G/Y/R/B/O	NT_010795	AC004099	38580954	3	RH10951	17	302.25					1		AC004099
S/G/Y/R/B/O	NT_010795	AC004099	38582186	3	RH55312	17	302.25					1		AC004099
S/G/Y/R/B/O	NT_010795	AC004099	38582186	3	WI-20853					17	328.10	1		AC004099
S/G/Y/R/B/O	NT_010795	AC004099	38582376	3	RH93949	17	302.25					1		AC004099
S/G/Y/R/B/O	NT_010795	AC004099	38598379	3	RH45104	17	302.25					1	AC091199,	AC004099, AC091199
S/G/Y/R/B/O	NT_010795	AC004099	38605995	3	RH48776	17	302.25					1	AC091199,	AC004099, AC091199
S/G/Y/R/B/O	NT_010795	AC004099	38614207	3	RH55041	17	302.25					1	AC091199,	AC004099, AC091199
S/G/Y/R/B/O	NT_010795	AC004099	38614207	3	NIB35					17	328.10	1	AC091199,	AC004099, AC091199
S/G/Y/R/B/O	NT_010795	AC091199	38673542	2	RH103454	17	305.68					1		AC091199
S/G/Y/R/B/O	NT_010795	AC091199	38677444	2	RH47071	17	305.47					1		AC091199

NT_010795 (cont)

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_010795	AC091199	38677567	2	RH39280	17	302.80					1		AC091199
S/G/Y/R/B/O	NT_010795	AC091199	38750035	2	RH55248	17	305.15					1	AC004132,	AC004132, AC091199
S/G/Y/R/B/O	NT_010795	AC091199	38750035	2	WI-7310					17	331.70	1	AC004132,	AC004132, AC091199
S/G/Y/R/B/O	NT_010795	AC004132	38782272	3	WI-10793					17	330.60	1	AC113211,	AC004132, AC113211
S/G/Y/R/B/O	NT_010795	AC113211	38835801	2
S/G/Y/R/B/O	NT_010795	AC067923	38916927	2	RH14269			17	1873.00			1	AC113211,	AC067923, AC113211
S/G/Y/R/B/O	NT_010795	AC067923	40808184	2	WI-4251					17	328.20	2	AC003976, AC021317, AC023133, AC027821,	AC003976, AC021317, AC023133, AC027821, AC036181, AC036181, AC067923
S/G/Y/R/B/O	NT_010795	AC021317	38955874	1
S/G/Y/R/B/O	NT_010795	AC027821	38968323	1
S/G/Y/R/B/O	NT_010795	AC004098	38986952	3	RH54958	17	333.00	17	2535.00	17	356.70	2	AC046170,	AC004098, AC046170
S/G/Y/R/B/O	NT_010795	AC004098	39076759	3	D17S920					17	356.70	1		AC004098
S/G/Y/R/B/O	NT_010795	AC004098	39096422	3	RH55055	17	330.66			17	361.00	1		AC004098
S/G/Y/R/B/O	NT_010795	AC004098	39118164	3	D17S791					17	361.10	1		AC004098
S/G/Y/R/B/O	NT_010795	AC004098	39118164	3	RH13280	17	333.10	17	2527.00			1		AC004098
S/G/Y/R/B/O	NT_010795	AC019319	39146181	3	WI-10450					17	361.40	1	AC015855,	AC015855, AC019319
S/G/Y/R/B/O	NT_010795	AC019319	39163957	3	WI-7460					17	361.10	1	AC015855,	AC015855, AC019319
S/G/Y/R/B/O	NT_010795	AC015855	39219372	1	RH55092	17	333.20			17	356.70	1		AC015855
S/G/Y/R/B/O	NT_010795	AC015855	39225580	1	RH55295	17	333.20			17	356.70	1		AC015855
S/G/Y/R/B/O	NT_010795	AC005670	39255637	3	RH92470	17	333.20					1	AC015855,	AC005670, AC015855
S/G/Y/R/B/O	NT_010795	AC005670	39257529	3	D17S931					17	361.00	1		AC005670
S/G/Y/R/B/O	NT_010795	AC005670	39257735	3	RH31778			17	2531.00			1	AC015855,	AC005670, AC015855
S/G/Y/R/B/O	NT_010795	AC005670	39278061	3	RH39414	17	333.10					1		AC005670
S/G/Y/R/B/O	NT_010795	AC005670	39278825	3	RH70724	17	333.10					1		AC005670
S/G/Y/R/B/O	NT_010795	AC005670	39280201	3	RH54936	17	330.66			17	361.10	1		AC005670
S/G/Y/R/B/O	NT_010795	AC005670	39280766	3	RH55079	17	333.00			17	356.30	1		AC005670
S/G/Y/R/B/O	NT_010795	AC005670	39291816	3	RH103290	17	333.10					1		AC005670
S/G/Y/R/B/O	NT_010795	AC005670	39322005	3	RH92808	17	333.20					1		AC005670
S/G/Y/R/B/O	NT_010795	AC005670	39371157	3	RH101998	17	405.16					3	AC046170, AC069007, AC090419, AC091132,	AC005670, AC046170, AC069007, AC090419, AC091132
S/G/Y/R/B/O	NT_010795	AC068152	39386579	3	RH92067	17	477.30					5	AC005332, AC005562, AC005562, AC011840, AC023278, AC090616, AC091132,	AC005332, AC005562, AC005562, AC011840, AC023278, AC068152, AC090616, AC091132
S/G/Y/R/B/O	NT_010795	AC068152	39397086	3	RH39346	17	405.94					2	AC069007, AC091132,	AC068152, AC069007, AC091132
S/G/Y/R/B/O	NT_010795	AC002558	39457049	3	RH102849	17	333.20					1		AC002558
S/G/Y/R/B/O	NT_010795	AC002558	39457117	3	RH55180	17	330.80			17	361.00	1		AC002558
S/G/Y/R/B/O	NT_010795	AC002558	39457185	3	RH26449	17	333.20					1		AC002558
S/G/Y/R/B/O	NT_010795	AC002558	39459860	3	RH76274	17	319.05					1		AC002558
S/G/Y/R/B/O	NT_010795	AC002558	39482906	3	RH39325	17	333.00					1		AC002558
S/G/Y/R/B/O	NT_010795	AC002558	39517275	3	RH46196	17	337.70					1	AC064817,	AC002558, AC064817
S/G/Y/R/B/O	NT_010795	AC002558	39524007	3	RH65445	17	333.20					1	AC064817,	AC002558, AC064817
S/G/Y/R/B/O	NT_010795	AC064817	39538076	1
S/G/Y/R/B/O	NT_010795	AC087649	39544300	1
S/G/Y/R/B/O	NT_010795	AC068234	39559977	3	RH36477	17	333.20					1	AC064817, AC087649,	AC064817, AC068234, AC087649
S/G/Y/R/B/O	NT_010795	AC068234	39562235	3	RH14143			17	2549.00			1	AC064817, AC087649,	AC064817, AC068234, AC087649
S/G/Y/R/B/O	NT_010795	AC068234	39562341	3	RH55166	17	333.20	17	2549.00	17	356.70	1	AC064817, AC087649,	AC064817, AC068234, AC087649, X58854
S/G/Y/R/B/O	NT_010795	AC068234	39630438	3	RH75719	17	332.50					1	AC064817,	AC064817, AC068234, M32674
S/G/Y/R/B/O	NT_010795	AC068234	39630447	3	RH39386	17	337.70					1	AC064817, AC087649,	AC064817, AC068234, AC087649, M32674
S/G/Y/R/B/O	NT_010795	AC068234	39646854	3	RH55049	17	330.80	17	2553.00	17	361.00	1		AC068234
S/G/Y/R/B/O	NT_010795	AC068234	39649382	3	RH14056			17	2553.00			1		AC068234, M32686
S/G/Y/R/B/O	NT_010795	AC068234	39650478	3	RH39370	17	332.80					1		AC068234, M32686
S/G/Y/R/B/O	NT_010795	AC068234	39650812	3	RH47114	17	333.20					1		AC068234, M32686
S/G/Y/R/B/O	NT_010795	AC068234	39651095	3	RH39336	17	333.10					1		AC068234, M32686
S/G/Y/R/B/O	NT_010795	AC068234	39654689	3	RH45616	17	329.51					1		AC068234, M32686

NT_010795 (cont)

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_010795	AC068234	39705527	3	RH54942	17	332.90			17	356.30	1	AC040934,	AC040934, AC068234
S/G/Y/R/B/O	NT_010795	AC068234	39714936	3	RH54980	17	333.30			17	366.60	1	AC021211, AC040934,	AC021211, AC040934, AC068234
S/G/Y/R/B/O	NT_010795	AC068234	39715824	3	RH8924			17	2553.00			1	AC021211, AC040934,	AC021211, AC040934, AC068234
S/G/Y/R/B/O	NT_010795	AC068234	39715895	3	RH28438	17	335.85					1	AC021211, AC040934,	AC021211, AC040934, AC068234
S/G/Y/R/B/O	NT_010795	AC040934	39772644	1	RH45935	17	336.16					2	AC021211,	AC021211, AC040934
S/G/Y/R/B/O	NT_010795	AC040934	39781592	1	RH67721	17	333.20					1	AC021211,	AC021211, AC040934
S/G/Y/R/B/O	NT_010795	AC021469	39797190	1
S/G/Y/R/B/O	NT_010795	AC021211	39893341	1	RH45935	17	336.16					2	AC040934,	AC021211, AC040934
S/G/Y/R/B/O	NT_010795	AC025682	40102130	1	RH48280	17	305.68					1	AC021317, AC021469, AC027821,	AC021317, AC021469, AC025682, AC027821, AC036181
S/G/Y/R/B/O	NT_010795	AC025682	40121949	1	RH55033	17	303.13					1	AC021317, AC021469,	AC021317, AC021469, AC025682
S/G/Y/R/B/O	NT_010795	AC025682	40121949	1	SGC44582					17	329.90	1	AC021317, AC021469,	AC021317, AC021469, AC025682
S/G/Y/R/B/O	NT_010795	AC025682	40152813	1	RH66964	17	332.59					1	AC015674,	AC015674, AC025682
S/G/Y/R/B/O	NT_010795	AC015674	40213949	3	RH36523	17	331.28					1		AC015674
S/G/Y/R/B/O	NT_010795	AC015674	40215112	3	RH92712	17	331.28					1		AC015674
S/G/Y/R/B/O	NT_010795	AC003665	40241488	3	RH55000	17	333.20			17	361.10	1	AC015674,	AC003665, AC015674
S/G/Y/R/B/O	NT_010795	AC003665	40264224	3	RH4178	17	338.88			17	369.10	1	AC015674,	AC015674
S/G/Y/R/B/O	NT_010795	AC003665	40353294	3	RH75740	17	337.70					1		AC003665
S/G/Y/R/B/O	NT_010795	AC003665	40367486	3	RH55260	17	338.99			17	373.70	1		AC003665
S/G/Y/R/B/O	NT_010795	AC003665	40374752	3	RH92416	17	336.76					1		AC003665
S/G/Y/R/B/O	NT_010795	AC018521	40426721	3	RH54998	17	337.49			17	373.10	1		AC018521
S/G/Y/R/B/O	NT_010795	AC018521	40458486	3	RH17404	17	337.38					1		AC018521
S/G/Y/R/B/O	NT_010795	AC018521	40474613	3	WI-6680					17	372.60	1		AC018521
S/G/Y/R/B/O	NT_010795	AC018521	40477726	3	RH17880	17	337.70					1		AC018521
S/G/Y/R/B/O	NT_010795	AC018521	40478541	3	RH39279	17	337.07					1		AC018521
S/G/Y/R/B/O	NT_010795	AC018521	40478873	3	RH75447	17	338.99					1		AC018521
S/G/Y/R/B/O	NT_010795	AC018521	40481764	3	RH17497	17	337.07					1		AC018521
S/G/Y/R/B/O	NT_010795	AC018521	40481764	3	RH33353			17	2564.00			1		AC018521
S/G/Y/R/B/O	NT_010795	AC004477	40511057	3	RH55245	17	337.49			17	373.80	1	AC018521,	AC004477, AC018521
S/G/Y/R/B/O	NT_010795	AC004477	40511076	3	RH64107	20	172.46					2	AC018521,	AC004477, AC018521
S/G/Y/R/B/O	NT_010795	AC004477	40561575	3	RH93052	17	337.28					1		AC004477
S/G/Y/R/B/O	NT_010795	AC004477	40596585	3	RH36428	17	338.66					1		AC004477
S/G/Y/R/B/O	NT_010795	AC004477	40596949	3	RH26716	17	338.99					1		AC004477
S/G/Y/R/B/O	NT_010795	AC006468	40652110	3	RH93763	17	338.99					1		AC006468
S/G/Y/R/B/O	NT_010795	AC006468	40652214	3	RH76462	17	338.77					1		AC006468
S/G/Y/R/B/O	NT_010795	AC006468	40652483	3	RH91353	17	338.99					1
S/G/Y/R/B/O	NT_010795	AC006468	40663250	3	RH16832	17	338.66					1		AC006468
S/G/Y/R/B/O	NT_010795	AC006468	40663337	3	RH12627	17	338.99					1		AC006468
S/G/Y/R/B/O	NT_010795		-		RH7907			17	2176.00			0	AC019085,	AC019085