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  Chromosome 17 - RH Maps - Single Contig
 

Chromosome 17 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_024972 NT_033293 NT_010692 NT_033294 NT_033299 NT_010823 NT_024857 NT_010676
NT_024862 NT_010718 NT_030843 NT_010700 NT_010808 NT_010799 NT_010736 NT_033298
NT_010647 NT_010844 NT_024901 NT_010840 NT_010795 NT_024897 NT_010755 NT_010765
NT_010748 NT_033295 NT_010733 NT_010783 NT_033296 NT_010689 NT_010704 NT_029467
NT_033297 NT_010775 NT_010711 NT_024866 NT_030163 NT_010672 NT_010677 NT_033292
NT_010641 NT_010843 NT_010664 NT_024915 NT_010661 NT_024871 NT_025911 NT_010845
NT_010663


  NT_010647
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010647AC007776341299161RH31400  171957.00  1 AC007776
S/G/Y/R/B/O NT_010647AC019095340675691          
S/G/Y/R/B/O NT_010647AC090844340727181RH2535317309.33    1AC019095, AC019095, AC090844
S/G/Y/R/B/O NT_010647AC090844340748301RH5491317306.83    1AC007776, AC007776
S/G/Y/R/B/O NT_010647AC090844340748301WI-9005    17341.201AC007776, AC007776
S/G/Y/R/B/O NT_010647AC090844340750401RH1807217309.33    1AC007776, AC019095, AC007776, AC019095, AC090844, AF388025, X03656
S/G/Y/R/B/O NT_010647AC090844340946931RH8673  171952.00  1AC007776, AC019095, AC007776, AC019095
S/G/Y/R/B/O NT_010647AC090844340947901RH2499017309.55    1AC019095, AC019095, AC090844
S/G/Y/R/B/O NT_010647AC090844341116841RH9339817309.33    1AC007776, AC019095, AC007776, AC019095, AC090844
S/G/Y/R/B/O NT_010647AC090844341715081RH7529417304.49    1AC007776, AC019095, AC007776, AC019095, AC090844
S/G/Y/R/B/O NT_010647AC090844341885451RH5528117316.02  17341.301AC019095, AC019095, AC090844
S/G/Y/R/B/O NT_010647AC090844341885871RH3935517309.33    1AC019095, AC019095, AC090844
S/G/Y/R/B/O NT_010647AC090844341886881RH1255917312.06    1AC019095, AC019095, AC090844
S/G/Y/R/B/O NT_010647AC091529343208213RH4430517305.08    3AC011184, AC092144, AC004529, AC011184, AC068199, AC091529, AC092144, AC092277
S/G/Y/R/B/O NT_010647AC091529344633063RH4810217315.81    1AC006449, AC006449, AC091529
S/G/Y/R/B/O NT_010647AC091529344640963RH5507417306.73    1AC006449, AC006449, AC091529
S/G/Y/R/B/O NT_010647AC091529344640963SGC31161    17338.101AC006449, AC006449, AC091529
S/G/Y/R/B/O NT_010647AC006449344939743RH5519117307.04  17329.101AC002118, AC002118, AC006449
S/G/Y/R/B/O NT_010647AC006449345179283RH4561017305.47    1 AC006449
S/G/Y/R/B/O NT_010647AC006449345200623SGC31780    17331.801AC002118, AC002118, AC006449
S/G/Y/R/B/O NT_010647AC006449345201503RH4191417306.52    1 AC006449
S/G/Y/R/B/O NT_010647AC006449345202963RH9830617305.47    1AC002118, AC002118, AC006449
S/G/Y/R/B/O NT_010647AC006449345241263RH9145117307.80    1AC002118, AC002118, AC006449
S/G/Y/R/B/O NT_010647AC006449345246513RH2625917307.26    1 AC006449
S/G/Y/R/B/O NT_010647AC006449345246913RH1258417304.93    1AC002118, AC002118, AC006449
S/G/Y/R/B/O NT_010647AC006449345251023RH7833117305.47    1AC002118, AC002118, AC006449
S/G/Y/R/B/O NT_010647AC006449345252903RH1737317307.34    1AC002118, AC002118, AC006449
S/G/Y/R/B/O NT_010647AC006449345564393IB2317    17326.601AC002118, AC002118
S/G/Y/R/B/O NT_010647AC006449345564393RH5526617305.47    1AC002118, AC002118
S/G/Y/R/B/O NT_010647AC006449345565373RH999517305.47    1AC002118, AC024189, AC002118, AC006449, AC024189
S/G/Y/R/B/O NT_010647AC006449345576833RH1651117307.67    1AC024189, AC006449, AC024189
S/G/Y/R/B/O NT_010647AC006449345583093NIB2018    17326.601AC002118, AC024189, AC002118, AC006449, AC024189
S/G/Y/R/B/O NT_010647AC006449345583093RH5527417304.93    1AC002118, AC024189, AC002118, AC006449, AC024189
S/G/Y/R/B/O NT_010647AC006449345583093RH13742  172101.00  1AC002118, AC024189, AC002118, AC006449, AC024189
S/G/Y/R/B/O NT_010647AC006449345583093RH13734  171959.0017326.701AC002118, AC002118
S/G/Y/R/B/O NT_010647AC006449345583093RH5521317305.47    1AC002118, AC002118
S/G/Y/R/B/O NT_010647AC006449345913163RH4565917306.73    1AC002118, AC024189, AC002118, AC006449, AC024189
S/G/Y/R/B/O NT_010647AC006449345919663RH9401617305.08    1AC002118, AC024189, AC002118, AC006449, AC024189
S/G/Y/R/B/O NT_010647AC007901346396892RH10405117305.08    1AC002118, AC024189, AC002118, AC007901, AC024189
S/G/Y/R/B/O NT_010647AC007901346409072WI-9689    17326.601AC002118, AC024189, AB061827, AC002118, AC007901, AC024189
S/G/Y/R/B/O NT_010647AC079289346681711          
S/G/Y/R/B/O NT_010647AC002118346710431          
S/G/Y/R/B/O NT_010647AC024189346936681          
S/G/Y/R/B/O NT_010647AC006441347297203RH2659417317.49    1AC024189, AC006441, AC024189
S/G/Y/R/B/O NT_010647AC006441347324893RH5530817306.83  17330.901AC024189, AC006441, AC024189
S/G/Y/R/B/O NT_010647AC006441348179383RH4270617304.32    1AC079289, AC006441, AC079289
S/G/Y/R/B/O NT_010647AC091178348744133WI-20714    17326.501AC079289, AC079289, AC091178
S/G/Y/R/B/O NT_010647AC091178348744133RH5507117307.04    1AC079289, AC079289, AC091178
S/G/Y/R/B/O NT_010647AC091178348745283RH1196017307.04    1AC079289, AC079289, AC091178
S/G/Y/R/B/O NT_010647AC091178348782703RH4187117311.96    1 AC091178


  NT_010647 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010647AC091178348783293TIGR-A004S34    17326.501 AC091178
S/G/Y/R/B/O NT_010647AC091178348783293RH5500617307.04    1 AC091178
S/G/Y/R/B/O NT_010647AC091178348783573RH1255117307.15    1 AC091178
S/G/Y/R/B/O NT_010647AC004408349845533RH5512417317.60  17338.601 AC004408, U86961
S/G/Y/R/B/O NT_010647AC004408349882843RH7135417307.04    1 AC004408, AC021102
S/G/Y/R/B/O NT_010647AC004408350141943WI-1420    17326.501AC015910, AC004408, AC015910, AC021102
S/G/Y/R/B/O NT_010647AC004408350141943RH5528517307.04    1AC015910, AC004408, AC015910, AC021102
S/G/Y/R/B/O NT_010647AC015910350638853RH7079417307.34    1 AC015910, AC021102
S/G/Y/R/B/O NT_010647AC015910350649993RH3941317307.34    1 AC015910, AC021102
S/G/Y/R/B/O NT_010647AC015910350649993RH4638317304.05    1 AC015910, AC021102
S/G/Y/R/B/O NT_010647AC015910350718803RH10262017309.33    1 AC015910, AC021102
S/G/Y/R/B/O NT_010647AC015910350752863WI-15068    17330.701 AC015910, AC021102
S/G/Y/R/B/O NT_010647AC015910350752863RH5493917309.33    1 AC015910, AC021102
S/G/Y/R/B/O NT_010647AC005288352154903SGC32796    17330.701AC009283, AC005288, AC009283
S/G/Y/R/B/O NT_010647AC005288352154903RH5498517309.33    1AC009283, AC005288, AC009283
S/G/Y/R/B/O NT_010647AC005288352155063RH1258317307.34    1AC009283, AC005288, AC009283
S/G/Y/R/B/O NT_010647AC005288352156353RH33731  171961.00  1AC009283, AC005288, AC009283
S/G/Y/R/B/O NT_010647AC005288352157173RH4720617307.34    1AC009283, AC005288, AC009283
S/G/Y/R/B/O NT_010647AC005288352165733RH1101417307.34    1AC009283, AC005288, AC009283
S/G/Y/R/B/O NT_010647AC005288352168013RH9148417307.04    1AC009283, AC005288, AC009283
S/G/Y/R/B/O NT_010647AC005288352188533RH7970817303.45    1AC009283, AC005288, AC009283
S/G/Y/R/B/O NT_010647AC005288352189043RH6489217307.34    1AC009283, AC005288, AC009283
S/G/Y/R/B/O NT_010647AC009283352197131          
S/G/Y/R/B/O NT_010647AC110495353371862RH7004517307.34    1 AC110495
S/G/Y/R/B/O NT_010647AC110495353390212RH9254317315.81    1 AC110495
S/G/Y/R/B/O NT_010647AC110495353395362RH10293917307.34    1 AC110495
S/G/Y/R/B/O NT_010647AC087491353799832          
S/G/Y/R/B/O NT_010647AC040933354415481RH5513617304.32    1AC087491, AC025531, AC040933, AC087491
S/G/Y/R/B/O NT_010647AC040933354415481WI-19537    17338.101AC087491, AC025531, AC040933, AC087491
S/G/Y/R/B/O NT_010647AC040933354685801RH9109417307.34    1AC079199, AC087491, AC025531, AC040933, AC079199, AC087491
S/G/Y/R/B/O NT_010647AC040933354715911RH4177017304.28    1AC079199, AC087491, AC025531, AC040933, AC079199, AC087491
S/G/Y/R/B/O NT_010647AC040933354716141RH6662517307.67    1AC079199, AC087491, AC025531, AC040933, AC079199, AC087491
S/G/Y/R/B/O NT_010647AC040933354756531RH7144917304.32    1AC079199, AC025531, AC079199, J03280, X52730
S/G/Y/R/B/O NT_010647AC040933354764741RH1701917307.34    1AC079199, AC087491, AC025531, AC040933, AC079199, AC087491
S/G/Y/R/B/O NT_010647AC040933354764961RH1269517307.34    1AC079199, AC087491, AC025531, AC040933, AC079199, AC087491
S/G/Y/R/B/O NT_010647AC040933355630631RH10428117315.71    1AC079199, AC040933, AC079199
S/G/Y/R/B/O NT_010647AC079199355308751RH6906617307.34    1AC040933, AC087491, AC025531, AC040933, AC079199, AC087491
S/G/Y/R/B/O NT_010647AC079199355791351RH6690117307.34    1AC040933, AC040933, AC079199
S/G/Y/R/B/O NT_010647AC079199355898061RH3930017307.67    1AC040933, AC040933, AC079199, AF274875
S/G/Y/R/B/O NT_010647 - RH1693217302.19    1AL445650, AC019015, AL356008, AL390775, AL445650
S/G/Y/R/B/O NT_010647 - RH8912  171959.00  0  
S/G/Y/R/B/O NT_010647 - SGC31900    17325.701AC003103, AC003103
S/G/Y/R/B/O NT_010647 - WI-11525    17325.701AC002346, AC007900, AC068400, AC002346, AC007900, AC068400
S/G/Y/R/B/O NT_010647 - NIB35    17328.101AC004099, AC091199, AC004099, AC091199
S/G/Y/R/B/O NT_010647 - WI-20853    17328.101AC004099, AC004099