Chromosome 3 - RH Maps - Single Contig

Chromosome 3 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_005927	NT_029265	NT_028123	NT_006044	NT_022517	NT_005507	NT_022516	NT_005564
NT_005762	NT_005646	NT_028139	NT_033044	NT_005502	NT_022539	NT_022464	NT_005580
NT_033049	NT_005498	NT_006036	NT_005825	NT_029949	NT_005991	NT_005585	NT_022567
NT_028129	NT_005990	NT_030623	NT_022439	NT_006014	NT_033032	NT_005986	NT_033015
NT_033038	NT_022552	NT_005787	NT_033040	NT_022481	NT_005607	NT_033026	NT_005999
NT_005531	NT_022473	NT_022423	NT_005510	NT_022510	NT_022665	NT_028127	NT_022400
NT_005530	NT_029258	NT_022442	NT_005769	NT_005526	NT_022540	NT_022717	NT_005644
NT_022446	NT_005583	NT_033034	NT_005882	NT_033036	NT_022419	NT_006031	NT_022551
NT_022459	NT_033029	NT_022713	NT_022460	NT_033011	NT_022554	NT_022720	NT_005684
NT_005663	NT_033018	NT_022420	NT_033043	NT_022642	NT_005791	NT_022452	NT_022435
NT_033028	NT_022497	NT_022625	NT_005568	NT_022401	NT_033031	NT_026983	NT_022475
NT_033037	NT_022451	NT_005509	NT_005527	NT_033050	NT_030634	NT_033041	NT_005863
NT_022454	NT_022607	NT_022453	NT_025670	NT_030622	NT_033045	NT_022728	NT_031768
NT_019350	NT_022434	NT_029256	NT_022405	NT_022569	NT_006042	NT_022484	NT_005795
NT_015150	NT_022445	NT_030625	NT_005532	NT_029269	NT_022455	NT_029931	NT_033022
NT_029257	NT_005513	NT_005994	NT_030635	NT_022411	NT_005824	NT_033021	NT_005543
NT_005588	NT_006029	NT_022513	NT_005523	NT_033014	NT_006025	NT_022404	NT_005823
NT_033019	NT_022393	NT_025663	NT_005567	NT_030630	NT_005969	NT_033051	NT_025664
NT_005655	NT_022503	NT_022632	NT_033024	NT_022416	NT_022432	NT_033020	NT_033035
NT_033042	NT_005832	NT_022502	NT_005772	NT_019358	NT_005591	NT_005775	NT_022616
NT_005540	NT_029939	NT_005616	NT_005539	NT_022555	NT_005849	NT_005657	NT_005678
NT_005846	NT_005612	NT_033030	NT_022463	NT_022594	NT_022449	NT_022421	NT_005744
NT_022565	NT_022518	NT_005638	NT_022397	NT_022700	NT_022422	NT_025667	NT_033052
NT_022472	NT_033033	NT_022526	NT_022674	NT_022458	NT_022509	NT_005635	NT_033053
NT_005950	NT_022396	NT_005952	NT_022406	NT_022676	NT_029253	NT_030638	NT_005910
NT_022549	NT_033009	NT_005911	NT_005962	NT_031766	NT_005883	NT_005501	NT_005571
NT_033017	NT_033013	NT_029928	NT_033010	NT_005834	NT_005535	NT_033012	NT_033016
NT_022508

NT_005684

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_005684	AC073144	83204981	1
S/G/Y/R/B/O	NT_005684	AC020574	83302270	1	WI-9931					3	277.30	1		AC020574
S/G/Y/R/B/O	NT_005684	AC024437	83451956	1	WI-4717					3	272.90	1	AC084362,	AC024437, AC084362
S/G/Y/R/B/O	NT_005684	AC084362	83323606	1
S/G/Y/R/B/O	NT_005684	AC093504	83567574	1
S/G/Y/R/B/O	NT_005684	AC016946	83691116	1
S/G/Y/R/B/O	NT_005684	AC108746	83775225	1
S/G/Y/R/B/O	NT_005684	AC073856	84025299	1	WI-5453					3	255.30	1		AC073856, AC078979
S/G/Y/R/B/O	NT_005684	AC016945	83964840	1	RH103635	3	215.23					1		AC016945
S/G/Y/R/B/O	NT_005684	AC106718	84274790	3	RH26409	3	218.05					1	AC016946,	AC016946, AC022664, AC023947, AC060795, AC106718
S/G/Y/R/B/O	NT_005684	AC106718	84274836	3	RH45408	3	229.42					1	AC016946,	AC016946, AC022664, AC023947, AC060795, AC106718
S/G/Y/R/B/O	NT_005684	AC106718	84335198	3	WI-12740					3	276.40	1		AC021069, AC022664, AC023947, AC060795, AC106718
S/G/Y/R/B/O	NT_005684	AC106718	84335198	3	RH58143	3	222.51					1		AC021069, AC022664, AC023947, AC060795, AC106718
S/G/Y/R/B/O	NT_005684	AC106718	84335701	3	CHLC.GATA88E12					3	270.70	1		AC021069, AC022664, AC023947, AC060795, AC106718
S/G/Y/R/B/O	NT_005684	AC106718	84344061	3	RH47423	3	219.18					1		AC021069, AC022664, AC023947, AC060795, AC106718
S/G/Y/R/B/O	NT_005684	AC055731	84372384	3	RH38660			3	3615.00	3	276.40	1		AC012217, AC021069, AC022664, AC023947, AC055731, AC060795
S/G/Y/R/B/O	NT_005684	AC055731	84372384	3	RH58523	3	222.41					1		AC012217, AC021069, AC022664, AC023947, AC055731, AC060795
S/G/Y/R/B/O	NT_005684	AC055731	84448901	3	RH33492			3	3615.00	3	270.70	1		AC012217, AC021069, AC055731
S/G/Y/R/B/O	NT_005684	AC055731	84448901	3	RH58687	3	225.35					1		AC012217, AC021069, AC055731
S/G/Y/R/B/O	NT_005684	AC055731	84448993	3	RH16327	3	229.42					1		AC012217, AC021069, AC055731
S/G/Y/R/B/O	NT_005684	AC108719	84508610	3
S/G/Y/R/B/O	NT_005684	AC027755	84549692	1
S/G/Y/R/B/O	NT_005684	AC106720	84588929	1	RH44887	3	218.77					1	AC027755,	AC016227, AC027755, AC106720, Z95705
S/G/Y/R/B/O	NT_005684	AC106720	84598314	1	RH65541	3	219.76					1	AC027755,	AC016227, AC027755, AC106720
S/G/Y/R/B/O	NT_005684	AC112508	84699821	3
S/G/Y/R/B/O	NT_005684	AC108752	84807071	1
S/G/Y/R/B/O	NT_005684	AC053483	84819993	1