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  Chromosome 3 - RH Maps - Single Contig
 

Chromosome 3 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_005927 NT_029265 NT_028123 NT_006044 NT_022517 NT_005507 NT_022516 NT_005564
NT_005762 NT_005646 NT_028139 NT_033044 NT_005502 NT_022539 NT_022464 NT_005580
NT_033049 NT_005498 NT_006036 NT_005825 NT_029949 NT_005991 NT_005585 NT_022567
NT_028129 NT_005990 NT_030623 NT_022439 NT_006014 NT_033032 NT_005986 NT_033015
NT_033038 NT_022552 NT_005787 NT_033040 NT_022481 NT_005607 NT_033026 NT_005999
NT_005531 NT_022473 NT_022423 NT_005510 NT_022510 NT_022665 NT_028127 NT_022400
NT_005530 NT_029258 NT_022442 NT_005769 NT_005526 NT_022540 NT_022717 NT_005644
NT_022446 NT_005583 NT_033034 NT_005882 NT_033036 NT_022419 NT_006031 NT_022551
NT_022459 NT_033029 NT_022713 NT_022460 NT_033011 NT_022554 NT_022720 NT_005684
NT_005663 NT_033018 NT_022420 NT_033043 NT_022642 NT_005791 NT_022452 NT_022435
NT_033028 NT_022497 NT_022625 NT_005568 NT_022401 NT_033031 NT_026983 NT_022475
NT_033037 NT_022451 NT_005509 NT_005527 NT_033050 NT_030634 NT_033041 NT_005863
NT_022454 NT_022607 NT_022453 NT_025670 NT_030622 NT_033045 NT_022728 NT_031768
NT_019350 NT_022434 NT_029256 NT_022405 NT_022569 NT_006042 NT_022484 NT_005795
NT_015150 NT_022445 NT_030625 NT_005532 NT_029269 NT_022455 NT_029931 NT_033022
NT_029257 NT_005513 NT_005994 NT_030635 NT_022411 NT_005824 NT_033021 NT_005543
NT_005588 NT_006029 NT_022513 NT_005523 NT_033014 NT_006025 NT_022404 NT_005823
NT_033019 NT_022393 NT_025663 NT_005567 NT_030630 NT_005969 NT_033051 NT_025664
NT_005655 NT_022503 NT_022632 NT_033024 NT_022416 NT_022432 NT_033020 NT_033035
NT_033042 NT_005832 NT_022502 NT_005772 NT_019358 NT_005591 NT_005775 NT_022616
NT_005540 NT_029939 NT_005616 NT_005539 NT_022555 NT_005849 NT_005657 NT_005678
NT_005846 NT_005612 NT_033030 NT_022463 NT_022594 NT_022449 NT_022421 NT_005744
NT_022565 NT_022518 NT_005638 NT_022397 NT_022700 NT_022422 NT_025667 NT_033052
NT_022472 NT_033033 NT_022526 NT_022674 NT_022458 NT_022509 NT_005635 NT_033053
NT_005950 NT_022396 NT_005952 NT_022406 NT_022676 NT_029253 NT_030638 NT_005910
NT_022549 NT_033009 NT_005911 NT_005962 NT_031766 NT_005883 NT_005501 NT_005571
NT_033017 NT_033013 NT_029928 NT_033010 NT_005834 NT_005535 NT_033012 NT_033016
NT_022508


  NT_005567
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005567AC0233161410174571          
S/G/Y/R/B/O NT_005567AC0269691410590161RH128853486.35    1AC092991, AC026969, AC092991
S/G/Y/R/B/O NT_005567AC0929891410266591          
S/G/Y/R/B/O NT_005567AC0929911417698911RH415933486.24    1AC026969, AC026969, AC092991
S/G/Y/R/B/O NT_005567AC0929911417701581RH789653484.84    1AC026969, AC026969, AC092991
S/G/Y/R/B/O NT_005567AC0929911417709561RH416483485.33    1AC026969, AC026969, AC092991
S/G/Y/R/B/O NT_005567AC0929911417713641RH579633484.84  3627.101AC026969, AC026969, AC092991
S/G/Y/R/B/O NT_005567AC0929911417713641RH14067  36342.00  1AC026969, AC026969, AC092991
S/G/Y/R/B/O NT_005567AC0929911417713641RH176023484.84    1AC026969, AC026969, AC092991
S/G/Y/R/B/O NT_005567AC0720401410625321          
S/G/Y/R/B/O NT_005567AC0969921422111291RH673163486.46    1AC011597, AC067726, AC074266, AC011597, AC067726, AC074266, AC096992
S/G/Y/R/B/O NT_005567AC0969921422140831RH415813486.08    1AC011597, AC067726, AC074266, AC011597, AC067726, AC074266, AC096992
S/G/Y/R/B/O NT_005567AC0695141412406551D3S1549    3630.401AC023316, AC023316, AC069514
S/G/Y/R/B/O NT_005567AC0695141412406551RH53813488.06    1AC023316, AC023316, AC069514
S/G/Y/R/B/O NT_005567AC0695141413380891CHLC.GATA52B04    3625.601AC112921, AC069514, AC112921
S/G/Y/R/B/O NT_005567AC1129211412840101          
S/G/Y/R/B/O NT_005567AC0227991413925921          
S/G/Y/R/B/O NT_005567AC1074251414437641          
S/G/Y/R/B/O NT_005567AC0270891414572471          
S/G/Y/R/B/O NT_005567AC0695241414971643RH30835  36665.00  2AC027089, AC069238, AC107425, AC027089, AC069238, AC069524, AC107425
S/G/Y/R/B/O NT_005567AC0695241415645583RH672083484.74    1AC017107, AC067730, AC072040, AC017107, AC027294, AC067730, AC069524, AC072040
S/G/Y/R/B/O NT_005567AC0695241415648213RH943403486.35    1AC017107, AC067730, AC072040, AC017107, AC027294, AC067730, AC069524, AC072040
S/G/Y/R/B/O NT_005567AC0695241415656663RH1032033486.35    1AC017107, AC067730, AC072040, AC017107, AC027294, AC067730, AC069524, AC072040
S/G/Y/R/B/O NT_005567AC0695241415695853RH582103484.52  3628.601AC017107, AC067730, AC069238, AC072040, AC017107, AC027294, AC067730, AC069238, AC069524, AC072040
S/G/Y/R/B/O NT_005567AC0171071416579311          
S/G/Y/R/B/O NT_005567AC0677301416580481          
S/G/Y/R/B/O NT_005567AC0692381418265291RH30835  36665.00  2AC027089, AC069524, AC107425, AC027089, AC069238, AC069524, AC107425
S/G/Y/R/B/O NT_005567AC0720391418612351RH580763486.35  3624.201 AC072039
S/G/Y/R/B/O NT_005567AC0684441419221481          
S/G/Y/R/B/O NT_005567AC0677261424598881RH447363489.75    2AC011597, AC074266, AC096992, AC011597, AC067726, AC074266, AC096992
S/G/Y/R/B/O NT_005567AC0677261424606431RH809843486.78    2AC011597, AC074266, AC096992, AC011597, AC067726, AC074266, AC096992
S/G/Y/R/B/O NT_005567AC0742661421931581          
S/G/Y/R/B/O NT_005567AC0115971422268543RH447363489.75    2AC067726, AC074266, AC096992, AC011597, AC067726, AC074266, AC096992
S/G/Y/R/B/O NT_005567AC0115971422276093RH809843486.78    2AC067726, AC074266, AC096992, AC011597, AC067726, AC074266, AC096992
S/G/Y/R/B/O NT_005567AC0115971422326783WI-2987    3624.901AC067726, AC074266, AC096992, AC011597, AC067726, AC074266, AC096992
S/G/Y/R/B/O NT_005567AC0115971423202693RH180953486.24    1 AC011597
S/G/Y/R/B/O NT_005567AC0115971423204523WI-9039    3632.501AC023402, AC011597, AC023402
S/G/Y/R/B/O NT_005567AC0115971423204523RH583043491.07    1AC023402, AC011597, AC023402
S/G/Y/R/B/O NT_005567AC0115971423827493RH1033843490.25    1AC023402, AC011597, AC023402
S/G/Y/R/B/O NT_005567AC0234021423946521          
S/G/Y/R/B/O NT_005567AC0136341424075361          
S/G/Y/R/B/O NT_005567AC0842301425825521          
S/G/Y/R/B/O NT_005567AC0217111426226561          
S/G/Y/R/B/O NT_005567AC0220771426749223          
S/G/Y/R/B/O NT_005567AC0273821427984151          
S/G/Y/R/B/O NT_005567 - RH1035013485.91    1AC016255, AC083905, AC016255, AC083905
S/G/Y/R/B/O NT_005567 - RH1036243487.25    1AC009896, AC068429, AC009896, AC068429
S/G/Y/R/B/O NT_005567 - RH115143482.76    1AC010207, AC026117, AC010207, AC026117
S/G/Y/R/B/O NT_005567 - RH116923482.86    1AC108728, AC108742, AC108728, AC108742
S/G/Y/R/B/O NT_005567 - RH117703486.02    1AC073361, AC080128, AC073361, AC080128


  NT_005567 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005567 - RH251833482.76    1AC010207, AC026117, AC010207, AC026117
S/G/Y/R/B/O NT_005567 - RH254673486.29    0 AC024933
S/G/Y/R/B/O NT_005567 - RH416203486.13    1AC097103, AC024933, AC097103
S/G/Y/R/B/O NT_005567 - RH581073486.24    2AC087742, AC108728, AC108742, AC087742, AC108728, AC108742
S/G/Y/R/B/O NT_005567 - RH582903485.44    1AC080128, AC080128
S/G/Y/R/B/O NT_005567 - RH583543484.52    0 AC073157
S/G/Y/R/B/O NT_005567 - RH585473486.13    1AC016230, AC018357, AC020890, AC016230, AC018357, AC020890, AC021026, AJ297560
S/G/Y/R/B/O NT_005567 - RH588213485.97    1AC010207, AC026117, AC010207, AC026117
S/G/Y/R/B/O NT_005567 - RH656083482.76    0 AC073157
S/G/Y/R/B/O NT_005567 - RH698673485.01    0AC027089, AC107425, AC112921, AC027089, AC107425, AC112921
S/G/Y/R/B/O NT_005567 - RH754043486.61    0AC011597, AC023402, AC011597, AC023402
S/G/Y/R/B/O NT_005567 - RH780603485.49    0  
S/G/Y/R/B/O NT_005567 - RH786713485.49    0  
S/G/Y/R/B/O NT_005567 - RH805203485.54    1AC010207, AC026117, AC010207, AC026117
S/G/Y/R/B/O NT_005567 - RH915123486.08    0 AC073157, AC109912
S/G/Y/R/B/O NT_005567 - RH982663486.13    1AC097103, AC024933, AC097103