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  Chromosome 3 - RH Maps - Single Contig
 

Chromosome 3 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_005927 NT_029265 NT_028123 NT_006044 NT_022517 NT_005507 NT_022516 NT_005564
NT_005762 NT_005646 NT_028139 NT_033044 NT_005502 NT_022539 NT_022464 NT_005580
NT_033049 NT_005498 NT_006036 NT_005825 NT_029949 NT_005991 NT_005585 NT_022567
NT_028129 NT_005990 NT_030623 NT_022439 NT_006014 NT_033032 NT_005986 NT_033015
NT_033038 NT_022552 NT_005787 NT_033040 NT_022481 NT_005607 NT_033026 NT_005999
NT_005531 NT_022473 NT_022423 NT_005510 NT_022510 NT_022665 NT_028127 NT_022400
NT_005530 NT_029258 NT_022442 NT_005769 NT_005526 NT_022540 NT_022717 NT_005644
NT_022446 NT_005583 NT_033034 NT_005882 NT_033036 NT_022419 NT_006031 NT_022551
NT_022459 NT_033029 NT_022713 NT_022460 NT_033011 NT_022554 NT_022720 NT_005684
NT_005663 NT_033018 NT_022420 NT_033043 NT_022642 NT_005791 NT_022452 NT_022435
NT_033028 NT_022497 NT_022625 NT_005568 NT_022401 NT_033031 NT_026983 NT_022475
NT_033037 NT_022451 NT_005509 NT_005527 NT_033050 NT_030634 NT_033041 NT_005863
NT_022454 NT_022607 NT_022453 NT_025670 NT_030622 NT_033045 NT_022728 NT_031768
NT_019350 NT_022434 NT_029256 NT_022405 NT_022569 NT_006042 NT_022484 NT_005795
NT_015150 NT_022445 NT_030625 NT_005532 NT_029269 NT_022455 NT_029931 NT_033022
NT_029257 NT_005513 NT_005994 NT_030635 NT_022411 NT_005824 NT_033021 NT_005543
NT_005588 NT_006029 NT_022513 NT_005523 NT_033014 NT_006025 NT_022404 NT_005823
NT_033019 NT_022393 NT_025663 NT_005567 NT_030630 NT_005969 NT_033051 NT_025664
NT_005655 NT_022503 NT_022632 NT_033024 NT_022416 NT_022432 NT_033020 NT_033035
NT_033042 NT_005832 NT_022502 NT_005772 NT_019358 NT_005591 NT_005775 NT_022616
NT_005540 NT_029939 NT_005616 NT_005539 NT_022555 NT_005849 NT_005657 NT_005678
NT_005846 NT_005612 NT_033030 NT_022463 NT_022594 NT_022449 NT_022421 NT_005744
NT_022565 NT_022518 NT_005638 NT_022397 NT_022700 NT_022422 NT_025667 NT_033052
NT_022472 NT_033033 NT_022526 NT_022674 NT_022458 NT_022509 NT_005635 NT_033053
NT_005950 NT_022396 NT_005952 NT_022406 NT_022676 NT_029253 NT_030638 NT_005910
NT_022549 NT_033009 NT_005911 NT_005962 NT_031766 NT_005883 NT_005501 NT_005571
NT_033017 NT_033013 NT_029928 NT_033010 NT_005834 NT_005535 NT_033012 NT_033016
NT_022508


  NT_022517
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022517AC099055192379731          
S/G/Y/R/B/O NT_022517AC104835193340921          
S/G/Y/R/B/O NT_022517AC107621195363531          
S/G/Y/R/B/O NT_022517AC099753196530693RH66021373.79    1 AC099753
S/G/Y/R/B/O NT_022517AC104441197994441          
S/G/Y/R/B/O NT_022517AC104183199643131          
S/G/Y/R/B/O NT_022517AC069533200517061          
S/G/Y/R/B/O NT_022517AC116096201159631          
S/G/Y/R/B/O NT_022517AC107622202139363          
S/G/Y/R/B/O NT_022517AC098972203625981          
S/G/Y/R/B/O NT_022517AC027500203792501          
S/G/Y/R/B/O NT_022517AC061958204319213          
S/G/Y/R/B/O NT_022517AC114337206097381          
S/G/Y/R/B/O NT_022517AC080134206472771RH28395368.49    1AC015542, AC114337, AC015542, AC080134, AC114337
S/G/Y/R/B/O NT_022517AC015542206512343          
S/G/Y/R/B/O NT_022517AC116098207950791          
S/G/Y/R/B/O NT_022517AC025292208573401          
S/G/Y/R/B/O NT_022517AC099538208816121          
S/G/Y/R/B/O NT_022517AC104182210340701          
S/G/Y/R/B/O NT_022517AC022805211928231RH91784373.61    1AC097635, AC022805, AC097635
S/G/Y/R/B/O NT_022517AC022805212205311RH11994369.36    1AC069207, AC097635, AC022805, AC069207, AC097635
S/G/Y/R/B/O NT_022517AC097635212268861          
S/G/Y/R/B/O NT_022517AC099057213336401RH58322375.24    2AC024149, AC069207, AC024149, AC069207, AC099057
S/G/Y/R/B/O NT_022517AC099057213336401WI-18328    3100.502AC024149, AC069207, AC024149, AC069207, AC099057
S/G/Y/R/B/O NT_022517AC099057213566641RH48918373.61    1AC069207, AC098972, AC069207, AC098972, AC099057
S/G/Y/R/B/O NT_022517AC069207212480201          
S/G/Y/R/B/O NT_022517AC099544214215111RH70298382.48    1AC023506, AC023506, AC099544
S/G/Y/R/B/O NT_022517AC023506214349421          
S/G/Y/R/B/O NT_022517AC055721214609711          
S/G/Y/R/B/O NT_022517AC020564218636141RH30800  31002.00  1AC055721, AC055721
S/G/Y/R/B/O NT_022517AC020564218636141RH49488383.28    1AC055721, AC055721
S/G/Y/R/B/O NT_022517AC099053216073311          
S/G/Y/R/B/O NT_022517AC108736216277481          
S/G/Y/R/B/O NT_022517AC018542217880181          
S/G/Y/R/B/O NT_022517AC114477219236331          
S/G/Y/R/B/O NT_022517AC092421220298073          
S/G/Y/R/B/O NT_022517AC104740222810353RH15431382.48    1 AC104740
S/G/Y/R/B/O NT_022517AC018547222913071          
S/G/Y/R/B/O NT_022517AC025364223329641          
S/G/Y/R/B/O NT_022517AC012089223992273RH25578374.32    1AC104183, AC012089, AC026674, AC104183
S/G/Y/R/B/O NT_022517AC012089223992313SGC31848    394.601AC104183, AC012089, AC026674, AC104183
S/G/Y/R/B/O NT_022517AC012089224006603RH58855374.22    1AC104183, AC012089, AC026674, AC104183
S/G/Y/R/B/O NT_022517AC012089224006603WI-6785    393.801AC104183, AC012089, AC026674, AC104183
S/G/Y/R/B/O NT_022517AC012089224054243RH58698374.84    1AC104183, AC012089, AC026674, AC104183
S/G/Y/R/B/O NT_022517AC012089224054243WI-14055    393.801AC104183, AC012089, AC026674, AC104183
S/G/Y/R/B/O NT_022517AC012089224057643RH58868375.243958.00381.901AC104183, AC012089, AC026674, AC104183
S/G/Y/R/B/O NT_022517AC012089224080533RH92414373.79    1AC104183, AC012089, AC026674, AC104183
S/G/Y/R/B/O NT_022517AC012089224137883RH58346376.05    1AC104183, AC012089, AC026674, AC104183
S/G/Y/R/B/O NT_022517AC012089224137883FB11F6    394.101AC104183, AC012089, AC026674, AC104183
S/G/Y/R/B/O NT_022517AC012089224139093RH66256374.53    1AC104183, AC012089, AC026674, AC104183


  NT_022517 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022517AC012089224232513RH12383377.46    1AC104183, AC012089, AC026674, AC104183
S/G/Y/R/B/O NT_022517AC012089224886693RH66444373.79    1AC009429, AC104183, AC009429, AC012089, AC021057, AC022049, AC026674, AC104183
S/G/Y/R/B/O NT_022517AC012089224886763RH58048377.56    1AC009429, AC104183, AC009429, AC012089, AC021057, AC022049, AC026674, AC104183
S/G/Y/R/B/O NT_022517AC012089224886763WI-21102    394.201AC009429, AC104183, AC009429, AC012089, AC021057, AC022049, AC026674, AC104183
S/G/Y/R/B/O NT_022517AC009429225246753RH58428372.143958.00382.001 AC009429, AC021057, AC022049, AC026674
S/G/Y/R/B/O NT_022517AC096914226096303          
S/G/Y/R/B/O NT_022517AC092504227127123          
S/G/Y/R/B/O NT_022517AC063935233475741RH109323625.10    2AC069414, AC055759, AC058333, AC063935, AC069414
S/G/Y/R/B/O NT_022517AC063935233549461RH266183623.42    2AC069414, AC055759, AC058333, AC063935, AC069414
S/G/Y/R/B/O NT_022517AC021377228063181          
S/G/Y/R/B/O NT_022517AC105933228153961          
S/G/Y/R/B/O NT_022517AC105750229613051          
S/G/Y/R/B/O NT_022517AC055826230799701          
S/G/Y/R/B/O NT_022517AC013685231034741          
S/G/Y/R/B/O NT_022517AC105765232833801RH70605372.57    1 AC105765
S/G/Y/R/B/O NT_022517AC105765232896441RH68018370.99    1 AC105765
S/G/Y/R/B/O NT_022517AC016840233558371          
S/G/Y/R/B/O NT_022517AC022500233933521          
S/G/Y/R/B/O NT_022517AC023798234201203WI-6465    393.901AC063935, AC063935
S/G/Y/R/B/O NT_022517AC023798234765983RH13348377.463974.00  1AC022500, AC022500
S/G/Y/R/B/O NT_022517AC096918236351423RH12672375.95    1AC016840, AC092505, AC016840, AC092505, AC096918
S/G/Y/R/B/O NT_022517AC092505237030303RH26740373.29    1 AC092505
S/G/Y/R/B/O NT_022517AC098974238064201          
S/G/Y/R/B/O NT_022517AC024732238492451          
S/G/Y/R/B/O NT_022517AC069505240070321          
S/G/Y/R/B/O NT_022517 - RH15501372.87    0  
S/G/Y/R/B/O NT_022517 - RH31667  3918.00  1AC020626, AC079840, AC020626, AC079840
S/G/Y/R/B/O NT_022517 - RH41563373.40    0  
S/G/Y/R/B/O NT_022517 - RH68415373.40    0  
S/G/Y/R/B/O NT_022517 - RH80454371.17    0