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Chromosome 3 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_005927 NT_029265 NT_028123 NT_006044 NT_022517 NT_005507 NT_022516 NT_005564
NT_005762 NT_005646 NT_028139 NT_033044 NT_005502 NT_022539 NT_022464 NT_005580
NT_033049 NT_005498 NT_006036 NT_005825 NT_029949 NT_005991 NT_005585 NT_022567
NT_028129 NT_005990 NT_030623 NT_022439 NT_006014 NT_033032 NT_005986 NT_033015
NT_033038 NT_022552 NT_005787 NT_033040 NT_022481 NT_005607 NT_033026 NT_005999
NT_005531 NT_022473 NT_022423 NT_005510 NT_022510 NT_022665 NT_028127 NT_022400
NT_005530 NT_029258 NT_022442 NT_005769 NT_005526 NT_022540 NT_022717 NT_005644
NT_022446 NT_005583 NT_033034 NT_005882 NT_033036 NT_022419 NT_006031 NT_022551
NT_022459 NT_033029 NT_022713 NT_022460 NT_033011 NT_022554 NT_022720 NT_005684
NT_005663 NT_033018 NT_022420 NT_033043 NT_022642 NT_005791 NT_022452 NT_022435
NT_033028 NT_022497 NT_022625 NT_005568 NT_022401 NT_033031 NT_026983 NT_022475
NT_033037 NT_022451 NT_005509 NT_005527 NT_033050 NT_030634 NT_033041 NT_005863
NT_022454 NT_022607 NT_022453 NT_025670 NT_030622 NT_033045 NT_022728 NT_031768
NT_019350 NT_022434 NT_029256 NT_022405 NT_022569 NT_006042 NT_022484 NT_005795
NT_015150 NT_022445 NT_030625 NT_005532 NT_029269 NT_022455 NT_029931 NT_033022
NT_029257 NT_005513 NT_005994 NT_030635 NT_022411 NT_005824 NT_033021 NT_005543
NT_005588 NT_006029 NT_022513 NT_005523 NT_033014 NT_006025 NT_022404 NT_005823
NT_033019 NT_022393 NT_025663 NT_005567 NT_030630 NT_005969 NT_033051 NT_025664
NT_005655 NT_022503 NT_022632 NT_033024 NT_022416 NT_022432 NT_033020 NT_033035
NT_033042 NT_005832 NT_022502 NT_005772 NT_019358 NT_005591 NT_005775 NT_022616
NT_005540 NT_029939 NT_005616 NT_005539 NT_022555 NT_005849 NT_005657 NT_005678
NT_005846 NT_005612 NT_033030 NT_022463 NT_022594 NT_022449 NT_022421 NT_005744
NT_022565 NT_022518 NT_005638 NT_022397 NT_022700 NT_022422 NT_025667 NT_033052
NT_022472 NT_033033 NT_022526 NT_022674 NT_022458 NT_022509 NT_005635 NT_033053
NT_005950 NT_022396 NT_005952 NT_022406 NT_022676 NT_029253 NT_030638 NT_005910
NT_022549 NT_033009 NT_005911 NT_005962 NT_031766 NT_005883 NT_005501 NT_005571
NT_033017 NT_033013 NT_029928 NT_033010 NT_005834 NT_005535 NT_033012 NT_033016
NT_022508


  NT_033026
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033026AC104164616148071RH416253198.12    2U66722, AC104164, U66722
S/G/Y/R/B/O NT_033026AF152363616334813          
S/G/Y/R/B/O NT_033026AC096917618871211RH744433198.02    1 AC096917
S/G/Y/R/B/O NT_033026AC096917618897661RH416683198.02    1 AC096917
S/G/Y/R/B/O NT_033026 - RH1020823198.02    0  
S/G/Y/R/B/O NT_033026 - RH1021733198.02    1AC021025, AC104303, AC021025, AC076969, AC104303
S/G/Y/R/B/O NT_033026 - RH1038493198.02    1AC116036, AC116036
S/G/Y/R/B/O NT_033026 - RH123413198.02    0AC027614, AC018899, AC027614
S/G/Y/R/B/O NT_033026 - RH125893192.16    1AC092049, AC098569, AC063925, AC092049, AC098569, AF032102
S/G/Y/R/B/O NT_033026 - RH128933198.02    1AC023346, AC112216, AC116036, AC023346, AC112216, AC116036
S/G/Y/R/B/O NT_033026 - RH162633198.02    1AC025589, AC099058, AC025589, AC099058
S/G/Y/R/B/O NT_033026 - RH178373193.27    1AC022499, AC112516, AC022499, AC112516
S/G/Y/R/B/O NT_033026 - RH263473198.02    1AC079624, AC079624
S/G/Y/R/B/O NT_033026 - RH271943198.02    1AC023346, AC105751, AC112216, AC023346, AC105751, AC112216
S/G/Y/R/B/O NT_033026 - RH284613198.02    1AC098479, AC110008, AC098479, AC110008
S/G/Y/R/B/O NT_033026 - RH286423197.21    1AC023346, AC112216, AC116036, AC023346, AC112216, AC116036
S/G/Y/R/B/O NT_033026 - RH361923197.21    1AC099536, AF152365, AC099536, AF152365
S/G/Y/R/B/O NT_033026 - RH364483198.02    1AC098479, AC110008, AC098479, AC110008
S/G/Y/R/B/O NT_033026 - RH364733198.02    1AC104168, AF152365, AC025812, AC104168, AC108487, AF152365
S/G/Y/R/B/O NT_033026 - RH415303198.02    1AC116036, AC116036, D90086
S/G/Y/R/B/O NT_033026 - RH416023192.47    1AC104436, AC104436
S/G/Y/R/B/O NT_033026 - RH416793198.02    0  
S/G/Y/R/B/O NT_033026 - RH418063198.02    1AC023346, AC105751, AC112216, AC023346, AC105751, AC112216
S/G/Y/R/B/O NT_033026 - RH454073193.68    0AC112516, AC112516
S/G/Y/R/B/O NT_033026 - RH455223198.02    1AC098479, AC110008, AC098479, AC110008
S/G/Y/R/B/O NT_033026 - RH455333198.02    2AC013421, AC025259, AC114399, AC013421, AC025259, AC114399
S/G/Y/R/B/O NT_033026 - RH456273198.02    1AC098479, AC110008, AC098479, AC110008
S/G/Y/R/B/O NT_033026 - RH462433198.02    0  
S/G/Y/R/B/O NT_033026 - RH465893198.02    1AC116036, AC116036
S/G/Y/R/B/O NT_033026 - RH479743198.02    1AC069254, AC099777, AC069254, AC099777
S/G/Y/R/B/O NT_033026 - RH482903198.02    1AC092418, AC108040, AC092418, AC108040
S/G/Y/R/B/O NT_033026 - RH579273198.02    0  
S/G/Y/R/B/O NT_033026 - RH580063198.02    1AC092418, AC108040, AC114480, AC092418, AC108040, AC114480
S/G/Y/R/B/O NT_033026 - RH580373198.02    0  
S/G/Y/R/B/O NT_033026 - RH580393198.02    1AC093413, AC093418, AC069441, AC093413, AC093418
S/G/Y/R/B/O NT_033026 - RH580813198.02    1AC025589, AC099058, AC025589, AC099058
S/G/Y/R/B/O NT_033026 - RH580913198.02    1AC104438, AC104438
S/G/Y/R/B/O NT_033026 - RH581653198.02    1AC079624, AC079624
S/G/Y/R/B/O NT_033026 - RH582013192.75    1AC096919, AC068168, AC069295, AC096919
S/G/Y/R/B/O NT_033026 - RH582313198.02    0  
S/G/Y/R/B/O NT_033026 - RH583143198.02    0AC098479, AC098479
S/G/Y/R/B/O NT_033026 - RH583213198.02    0  
S/G/Y/R/B/O NT_033026 - RH583803198.02    1AC016944, AC093413, AC093418, AC016944, AC093413, AC093418
S/G/Y/R/B/O NT_033026 - RH583823198.02    1AC025589, AC025589
S/G/Y/R/B/O NT_033026 - RH585003198.02    1AC114480, AC114480
S/G/Y/R/B/O NT_033026 - RH586343198.02    1AC023346, AC105751, AC112216, AC023346, AC105751, AC112216
S/G/Y/R/B/O NT_033026 - RH586563198.02    1AC023346, AC104303, AC023346, AC104303
S/G/Y/R/B/O NT_033026 - RH587583198.02    1AC069438, AC093928, AC069438, AC093928
S/G/Y/R/B/O NT_033026 - RH676233196.80    1AC106827, AC009813, AC106827
S/G/Y/R/B/O NT_033026 - RH687783195.79    1AC106827, AC106827


  NT_033026 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033026 - RH713023198.02    0  
S/G/Y/R/B/O NT_033026 - RH750533191.75    1AC092049, AC063925, AC092049
S/G/Y/R/B/O NT_033026 - RH782993198.02    0  
S/G/Y/R/B/O NT_033026 - RH786483198.02    0  
S/G/Y/R/B/O NT_033026 - RH787283198.02    1AC106827, AC009813, AC106827
S/G/Y/R/B/O NT_033026 - RH912973198.02    0  
S/G/Y/R/B/O NT_033026 - RH801893198.02    1AC023346, AC105751, AC023346, AC105751
S/G/Y/R/B/O NT_033026 - RH927033198.02    1AC099558, AC114480, AC099558, AC114480
S/G/Y/R/B/O NT_033026 - RH931483198.02    0  
S/G/Y/R/B/O NT_033026 - RH935623196.80    1AC021025, AC104303, AC021025, AC076969, AC104303
S/G/Y/R/B/O NT_033026 - RH938503198.02    1AC092418, AC108040, AC092418, AC108040
S/G/Y/R/B/O NT_033026 - RH940533198.02    1AC092050, AC097358, AC092050, AC097358
S/G/Y/R/B/O NT_033026 - RH981903198.02    0  
S/G/Y/R/B/O NT_033026 - RH986653198.02    1AC104331, AC104331
S/G/Y/R/B/O NT_033026 - RH989473198.02    1AC069254, AC099777, AC114399, AC069254, AC099777, AC114399
S/G/Y/R/B/O NT_033026 - RH990003198.02    1AC093928, AC093928
S/G/Y/R/B/O NT_033026 - RH99963192.65    1AC007944, AC011312, AC018656, AC092040, AC092419, AC007944, AC011312, AC018656, AC092040, AC092419