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Chromosome 3 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_005927 NT_029265 NT_028123 NT_006044 NT_022517 NT_005507 NT_022516 NT_005564
NT_005762 NT_005646 NT_028139 NT_033044 NT_005502 NT_022539 NT_022464 NT_005580
NT_033049 NT_005498 NT_006036 NT_005825 NT_029949 NT_005991 NT_005585 NT_022567
NT_028129 NT_005990 NT_030623 NT_022439 NT_006014 NT_033032 NT_005986 NT_033015
NT_033038 NT_022552 NT_005787 NT_033040 NT_022481 NT_005607 NT_033026 NT_005999
NT_005531 NT_022473 NT_022423 NT_005510 NT_022510 NT_022665 NT_028127 NT_022400
NT_005530 NT_029258 NT_022442 NT_005769 NT_005526 NT_022540 NT_022717 NT_005644
NT_022446 NT_005583 NT_033034 NT_005882 NT_033036 NT_022419 NT_006031 NT_022551
NT_022459 NT_033029 NT_022713 NT_022460 NT_033011 NT_022554 NT_022720 NT_005684
NT_005663 NT_033018 NT_022420 NT_033043 NT_022642 NT_005791 NT_022452 NT_022435
NT_033028 NT_022497 NT_022625 NT_005568 NT_022401 NT_033031 NT_026983 NT_022475
NT_033037 NT_022451 NT_005509 NT_005527 NT_033050 NT_030634 NT_033041 NT_005863
NT_022454 NT_022607 NT_022453 NT_025670 NT_030622 NT_033045 NT_022728 NT_031768
NT_019350 NT_022434 NT_029256 NT_022405 NT_022569 NT_006042 NT_022484 NT_005795
NT_015150 NT_022445 NT_030625 NT_005532 NT_029269 NT_022455 NT_029931 NT_033022
NT_029257 NT_005513 NT_005994 NT_030635 NT_022411 NT_005824 NT_033021 NT_005543
NT_005588 NT_006029 NT_022513 NT_005523 NT_033014 NT_006025 NT_022404 NT_005823
NT_033019 NT_022393 NT_025663 NT_005567 NT_030630 NT_005969 NT_033051 NT_025664
NT_005655 NT_022503 NT_022632 NT_033024 NT_022416 NT_022432 NT_033020 NT_033035
NT_033042 NT_005832 NT_022502 NT_005772 NT_019358 NT_005591 NT_005775 NT_022616
NT_005540 NT_029939 NT_005616 NT_005539 NT_022555 NT_005849 NT_005657 NT_005678
NT_005846 NT_005612 NT_033030 NT_022463 NT_022594 NT_022449 NT_022421 NT_005744
NT_022565 NT_022518 NT_005638 NT_022397 NT_022700 NT_022422 NT_025667 NT_033052
NT_022472 NT_033033 NT_022526 NT_022674 NT_022458 NT_022509 NT_005635 NT_033053
NT_005950 NT_022396 NT_005952 NT_022406 NT_022676 NT_029253 NT_030638 NT_005910
NT_022549 NT_033009 NT_005911 NT_005962 NT_031766 NT_005883 NT_005501 NT_005571
NT_033017 NT_033013 NT_029928 NT_033010 NT_005834 NT_005535 NT_033012 NT_033016
NT_022508


  NT_005663
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005663AC107310851497491RH30061  33610.00  1AC036139, AC106726, AC036139, AC106726
S/G/Y/R/B/O NT_005663AC107309850750271          
S/G/Y/R/B/O NT_005663AC106726851710831          
S/G/Y/R/B/O NT_005663AC036139851722671          
S/G/Y/R/B/O NT_005663AC016220852261061          
S/G/Y/R/B/O NT_005663AC023122853991733CHLC.GATA3A03    3277.401AC026852, AC023122, AC026852
S/G/Y/R/B/O NT_005663AC026852855023711RH31697  33621.00  1 AC026852
S/G/Y/R/B/O NT_005663AC026852855813051CHLC.GATA67F08    3272.901 AC026852
S/G/Y/R/B/O NT_005663AC068386856371301          
S/G/Y/R/B/O NT_005663AC073164856533081CHLC.GATA45C04    3299.901 AC073164
S/G/Y/R/B/O NT_005663AC107030857672033RH921423234.38    1AC068386, AC073164, AC068386, AC073164, AC107030
S/G/Y/R/B/O NT_005663AC107030858338893WI-4729    3290.401AC017015, AC068386, AC017015, AC068386, AC107030
S/G/Y/R/B/O NT_005663AC107030858589673RH451323232.26    1AC017015, AC068386, AC017015, AC068386, AC107030
S/G/Y/R/B/O NT_005663AC017015858799913          
S/G/Y/R/B/O NT_005663AC025029859664701          
S/G/Y/R/B/O NT_005663AC099049860359483RH698483233.71    1AC025029, AC025029, AC099049
S/G/Y/R/B/O NT_005663AC099049860502613RH581293232.3733679.003288.101AC025029, AC025029, AC099049
S/G/Y/R/B/O NT_005663AC099049860507943RH364903233.82    1AC025029, AC025029, AC099049
S/G/Y/R/B/O NT_005663AC099049861272153RH75181180.58    3AC021474, AC022071, AC023945, AC107302, AL022329, AP000931, AP001020, AP001097, AP001178, AC021474, AC022071, AC023945, AC099049, AC107302, AL022329, AP000931, AP001020, AP001097, AP001178
S/G/Y/R/B/O NT_005663AC023945861814951          
S/G/Y/R/B/O NT_005663AC107302861817661          
S/G/Y/R/B/O NT_005663AC022071862368301          
S/G/Y/R/B/O NT_005663AC099542862480243          
S/G/Y/R/B/O NT_005663AC099664864407541RH165483226.58    1AC024967, AC024967, AC099664
S/G/Y/R/B/O NT_005663AC099664867979391D3S2372    3281.401AC024967, AC024967, AC099664
S/G/Y/R/B/O NT_005663AC024967864788701          
S/G/Y/R/B/O NT_005663AC027432864791431          
S/G/Y/R/B/O NT_005663AC060778864848221          
S/G/Y/R/B/O NT_005663AC108740865050891          
S/G/Y/R/B/O NT_005663AC108690866332811          
S/G/Y/R/B/O NT_005663AC076963869128661RH452283227.55    1AC108690, AC076963, AC108690
S/G/Y/R/B/O NT_005663AC067738867216241          
S/G/Y/R/B/O NT_005663AC012298867401201          
S/G/Y/R/B/O NT_005663AC068204869007091          
S/G/Y/R/B/O NT_005663AC068756869356751          
S/G/Y/R/B/O NT_005663AC116442870178921          
S/G/Y/R/B/O NT_005663 - RH108123234.16    0AC025029, AC025029
S/G/Y/R/B/O NT_005663 - RH459  33634.00  0  
S/G/Y/R/B/O NT_005663 - CHLC.GATA41H09    3288.500  
S/G/Y/R/B/O NT_005663 - RH415973232.92    1AC073030, AC073030
S/G/Y/R/B/O NT_005663 - CHLC.GATA24E11    3296.001AC068360, AC068360
S/G/Y/R/B/O NT_005663 - RH57253233.04    1AC073030, AC078859, AC073030, AC078859
S/G/Y/R/B/O NT_005663 - RH671183232.59    1AC018526, AC021084, AL162871, AC018526, AC021084, AL162871
S/G/Y/R/B/O NT_005663 - RH703343232.70    1AC025613, AC067717, AC025613, AC067717
S/G/Y/R/B/O NT_005663 - RH755173232.81    1AC026877, AC026962, AC026877, AC026962
S/G/Y/R/B/O NT_005663 - RH800563233.88    1AC018361, AC018361