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  Chromosome 18 - RH Maps - Single Contig
 

Chromosome 18 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_011005 NT_011036 NT_030854 NT_025000 NT_024990 NT_024982 NT_011090 NT_025112
NT_011024 NT_030853 NT_010870 NT_025037 NT_033304 NT_019631 NT_010956 NT_010918
NT_010859 NT_028384 NT_024983 NT_031911 NT_011044 NT_033311 NT_010966 NT_010924
NT_030852 NT_010934 NT_025022 NT_010911 NT_024981 NT_010988 NT_028380 NT_010902
NT_033310 NT_024989 NT_033306 NT_033307 NT_010874 NT_033905 NT_030857 NT_025058
NT_010893 NT_011059 NT_011085 NT_033908 NT_033907 NT_025116 NT_010895 NT_033906
NT_033911 NT_033308 NT_024992 NT_033910 NT_033909 NT_025001 NT_010948 NT_033300
NT_025028 NT_010940 NT_025004 NT_028385 NT_025024 NT_024997 NT_024980 NT_024988
NT_033302 NT_010883 NT_010879


  NT_011005
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011005AC03197612930561RH700441819.25    1AC011983, AC011983, AC031976, AP001196
S/G/Y/R/B/O NT_011005AC008109409043WI-5528    187.001AC031976, AC008109, AC031976, AP001196
S/G/Y/R/B/O NT_011005AC0191832846033RH481211822.89    1 AC019183
S/G/Y/R/B/O NT_011005AC0799713580542WI-3058    185.001AC013341, AC013341, AC079971
S/G/Y/R/B/O NT_011005AC0133413897831RH31413  1897.00  1 AC013341
S/G/Y/R/B/O NT_011005AP0009154106981          
S/G/Y/R/B/O NT_011005AC0225454578841          
S/G/Y/R/B/O NT_011005AP00117814013081RH75181180.58    3AC021474, AC022071, AC023945, AC099049, AC107302, AL022329, AP000931, AP001020, AP001097, AC021474, AC022071, AC023945, AC099049, AC107302, AL022329, AP000931, AP001020, AP001097, AP001178
S/G/Y/R/B/O NT_011005AP00117814030711RH690801813.70    1AC021474, AP000931, AP001020, AP001097, AC021474, AP000931, AP001020, AP001097, AP001178
S/G/Y/R/B/O NT_011005AP00117814030961RH76197181.14    2AC021474, AL022329, AP000931, AP001020, AP001097, AC021474, AL022329, AP000931, AP001020, AP001097, AP001178
S/G/Y/R/B/O NT_011005AP00117814758431RH676821811.99    2AC020697, AC021474, AP001020, AP001097, AC020697, AC021474, AF305057, AP001020, AP001097, AP001178
S/G/Y/R/B/O NT_011005AP00117814758881RH392601813.70    2AC020697, AC021474, AP001020, AP001097, AC020697, AC021474, AP001020, AP001097, AP001178
S/G/Y/R/B/O NT_011005AP00117815254401RH932391815.93    1AC020697, AC021474, AP001020, AP001097, AC020697, AC021474, AP001020, AP001097, AP001178, D00596
S/G/Y/R/B/O NT_011005AP00117815273581RH675801813.70    1AC020697, AC021474, AP001020, AC020697, AC021474, AP001020, AP001178, D00596
S/G/Y/R/B/O NT_011005AC02069715041601RH38584  180.00  1AP001020, AP001020
S/G/Y/R/B/O NT_011005AC02069715041761RH133111813.701816.00  1AC021474, AC020697, AC021474
S/G/Y/R/B/O NT_011005AC02069715075971RH553961810.141813.001812.501AC021474, AP001020, AP001097, AP001178, AC020697, AC021474, AP001020, AP001097, AP001178
S/G/Y/R/B/O NT_011005AC02069715080721RH14921  1813.00  1AC021474, AP001020, AP001097, AP001178, AC020697, AC021474, AP001020, AP001097, AP001178
S/G/Y/R/B/O NT_011005AC02069715082161RH554041813.70  1812.401AP001020, AP001097, AP001178, AC020697, AP001020, AP001097, AP001178
S/G/Y/R/B/O NT_011005AC02069715297881RH791651812.49    1AC021474, AP001020, AC020697, AC021474, AF305057, AP001020, D00596
S/G/Y/R/B/O NT_011005AC02069715297911RH392731813.70    1AC021474, AP001020, AP001097, AP001178, AC020697, AC021474, AF305057, AP001020, AP001097, AP001178, D00596
S/G/Y/R/B/O NT_011005AC02069715301621RH553371815.13  1812.401AC021474, AC020697, AC021474, AF305057, D00596
S/G/Y/R/B/O NT_011005AC02069715303061RH13870  1825.00  1AC021474, AP001020, AC020697, AC021474, AF305057, AP001020, D00596
S/G/Y/R/B/O NT_011005AC02069715303531RH110101813.70    1AC021474, AP001020, AC020697, AC021474, AF305057, AP001020, D00596
S/G/Y/R/B/O NT_011005AC02069715304171RH8765  1816.00  1AP001020, AP001020
S/G/Y/R/B/O NT_011005AC02069715311681RH554081815.13  1812.401AC021474, AP001020, AP001097, AP001178, AC020697, AC021474, AF305057, AP001020, AP001097, AP001178, D00596
S/G/Y/R/B/O NT_011005AC02069715312331RH392671813.70    1AC021474, AP001020, AP001097, AP001178, AC020697, AC021474, AF305057, AP001020, AP001097, AP001178, D00596
S/G/Y/R/B/O NT_011005AC02069715312381RH122561812.19    1AC021474, AP001020, AP001097, AP001178, AC020697, AC021474, AF305057, AP001020, AP001097, AP001178, D00596
S/G/Y/R/B/O NT_011005AC02069715524001RH392601813.70    2AC021474, AP001020, AP001097, AP001178, AC020697, AC021474, AP001020, AP001097, AP001178
S/G/Y/R/B/O NT_011005AC02069715524601RH676821811.99    2AC021474, AP001020, AP001097, AP001178, AC020697, AC021474, AF305057, AP001020, AP001097, AP001178
S/G/Y/R/B/O NT_011005AC02147414266411RH659781814.82    1AP001020, AP001097, AC021474, AP001020, AP001097
S/G/Y/R/B/O NT_011005AP0010976742291          
S/G/Y/R/B/O NT_011005AC0695726779121          
S/G/Y/R/B/O NT_011005AC0461726804961          
S/G/Y/R/B/O NT_011005AC0251127282301          
S/G/Y/R/B/O NT_011005AC0274337663881          
S/G/Y/R/B/O NT_011005AP0008298391471          
S/G/Y/R/B/O NT_011005AP0008949204821RH55523187.511858.001814.501AC069572, AC069572, X60435
S/G/Y/R/B/O NT_011005AP0008949214231RH179151814.82    1AC069572, AP000938, AC069572, AP000894, AP000938, X60435
S/G/Y/R/B/O NT_011005AP0008949325711RH924711812.39    1AC069572, AP000938, AC069572, AP000894, AP000938
S/G/Y/R/B/O NT_011005AP00089417452461RH76031188.04    1AP000931, AP000938, AP000894, AP000931, AP000938
S/G/Y/R/B/O NT_011005AP0009389438301          
S/G/Y/R/B/O NT_011005AC01612810681091RH46218180.23    1AP000900, AP000915, AP001022, AC016128, AP000900, AP000915, AP000939, AP001022
S/G/Y/R/B/O NT_011005AC01612811739451RH7896  1837.00  1AP000845, AP000900, AP001022, AC016128, AP000845, AP000900, AP000939, AP001022
S/G/Y/R/B/O NT_011005AC01612811739721RH65814187.09    1AP000845, AP000900, AP001022, AC016128, AP000845, AP000900, AP000939, AP001022
S/G/Y/R/B/O NT_011005AC01612811740011RH252081814.70    1AP000845, AP000900, AP001022, AC016128, AP000845, AP000900, AP000939, AP001022
S/G/Y/R/B/O NT_011005AC01612811741581RH98521814.70    1AP000845, AP000900, AP001022, AC016128, AP000845, AP000900, AP000939, AP001022
S/G/Y/R/B/O NT_011005AP00090011711341RH176451814.70    1AC016128, AP000845, AP001022, AC016128, AP000845, AP000900, AP000939, AP001022
S/G/Y/R/B/O NT_011005AP00090011713501RH555691811.371837.001810.501AC016128, AP000845, AP001022, AC016128, AP000845, AP000900, AP000939, AP001022
S/G/Y/R/B/O NT_011005AP00090011713931RH472431814.70    1AC016128, AP000845, AP001022, AC016128, AP000845, AP000900, AP000939, AP001022


  NT_011005 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011005AP00084510842441          
S/G/Y/R/B/O NT_011005AP00102211309601          
S/G/Y/R/B/O NT_011005AC01198312409781          
S/G/Y/R/B/O NT_011005AP00102014200101RH687841813.70    1AC021474, AP000931, AC021474, AP000931, AP001020
S/G/Y/R/B/O NT_011005AP00100516873971RH659261814.70    1AP000845, AP000845, AP001005
S/G/Y/R/B/O NT_011005AP00100517017951RH7884  1846.00  2AC036178, AC036178, AP001005
S/G/Y/R/B/O NT_011005AP00093117334901          
S/G/Y/R/B/O NT_011005AC03747419480971AFMB082ZF1    185.001 AC037474
S/G/Y/R/B/O NT_011005 - RH47551182.72    0AP000915, AP000915, AP000939
S/G/Y/R/B/O NT_011005 - SGC31055    185.001AC007941, AC015566, AP001011, AC007941, AC015566, AP001011
S/G/Y/R/B/O NT_011005 - RH75176184.27    0 AC027270, AP001107
S/G/Y/R/B/O NT_011005 - WI-3730    185.001AC007941, AC015566, AC015958, AP000898, AP000937, AP001011, AC007941, AC015566, AC015958, AP000898, AP000937, AP001011
S/G/Y/R/B/O NT_011005 - WI-22474    185.001AC015958, AP000898, AP000937, AP001011, AC015958, AP000898, AP000937, AP001011
S/G/Y/R/B/O NT_011005 - WI-20109    187.101AC015958, AP000898, AP000937, AP001011, AC015958, AP000898, AP000937, AP001011