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  Chromosome 18 - RH Maps - Single Contig
 

Chromosome 18 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_011005 NT_011036 NT_030854 NT_025000 NT_024990 NT_024982 NT_011090 NT_025112
NT_011024 NT_030853 NT_010870 NT_025037 NT_033304 NT_019631 NT_010956 NT_010918
NT_010859 NT_028384 NT_024983 NT_031911 NT_011044 NT_033311 NT_010966 NT_010924
NT_030852 NT_010934 NT_025022 NT_010911 NT_024981 NT_010988 NT_028380 NT_010902
NT_033310 NT_024989 NT_033306 NT_033307 NT_010874 NT_033905 NT_030857 NT_025058
NT_010893 NT_011059 NT_011085 NT_033908 NT_033907 NT_025116 NT_010895 NT_033906
NT_033911 NT_033308 NT_024992 NT_033910 NT_033909 NT_025001 NT_010948 NT_033300
NT_025028 NT_010940 NT_025004 NT_028385 NT_025024 NT_024997 NT_024980 NT_024988
NT_033302 NT_010883 NT_010879


  NT_011059
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011059AC007673540893743          
S/G/Y/R/B/O NT_011059AC098848542647542RH1221618370.08    1AP001910, AC098848, AP001910
S/G/Y/R/B/O NT_011059AC098848542683512RH5557518373.42    1AP001910, AC098848, AP001910
S/G/Y/R/B/O NT_011059AC098848542683512WI-16430    18359.901AP001910, AC098848, AP001910
S/G/Y/R/B/O NT_011059AC098848542709592RH3922818370.08    1AP001910, AC098848, AP001910
S/G/Y/R/B/O NT_011059AC098848543529472RH451318413.36    2AC024371, AC084697, AC024371, AC084697, AC098848, AL354792
S/G/Y/R/B/O NT_011059AC098848543634352RH10212618370.70    1AP001910, AC098848, AP001910
S/G/Y/R/B/O NT_011059AP001493542874461          
S/G/Y/R/B/O NT_011059AP001399542907081          
S/G/Y/R/B/O NT_011059AP002896542907351          
S/G/Y/R/B/O NT_011059AP001910542937821          
S/G/Y/R/B/O NT_011059AC103667544216673          
S/G/Y/R/B/O NT_011059AC091103545678943RH6865318371.33    1AP001399, AP001493, AP002896, AC073440, AC090405, AC091103, AC091111, AP001399, AP001493, AP001548, AP002896
S/G/Y/R/B/O NT_011059AC091103546003703RH1247018372.48    1AP001399, AP001493, AP001544, AP002896, AC073440, AC090405, AC091103, AC091111, AP001399, AP001493, AP001544, AP001548, AP002896
S/G/Y/R/B/O NT_011059AC091103546011793RH5561518373.53  18401.201AP001399, AP001493, AP001544, AC073440, AC090405, AC091103, AC091111, AP001399, AP001493, AP001544, AP001548
S/G/Y/R/B/O NT_011059AC091103546056533RH9274918372.26    1AP001399, AP001493, AP001544, AP002896, AC073440, AC090405, AP001399, AP001493, AP001544, AP001548, AP002896
S/G/Y/R/B/O NT_011059AC091103546371743RH7076018370.08    1AP001399, AP001544, AP002896, AC073440, AC090405, AC091103, AC091111, AP001399, AP001544, AP001548, AP002896
S/G/Y/R/B/O NT_011059AC091103546373133RH10329718370.08    1AP001399, AP001544, AP002896, AC073440, AC090405, AC091103, AC091111, AP001399, AP001544, AP001548, AP002896
S/G/Y/R/B/O NT_011059AC091103546524193RH13869  182021.00  1AP001399, AP001493, AP001544, AP002896, AC073440, AC090405, AC091103, AC091111, AP001399, AP001493, AP001544, AP001548, AP002896
S/G/Y/R/B/O NT_011059AC091103546592893RH5562318373.00  18407.601AP001399, AP001493, AP001544, AC073440, AC090405, AC091103, AC091111, AP001399, AP001493, AP001544, AP001548
S/G/Y/R/B/O NT_011059AC013587547022921RH1244618371.22    1AP001493, AP001544, AC013587, AC090405, AP001493, AP001544
S/G/Y/R/B/O NT_011059AC013587547161081RH5537518371.43  18412.201AP001544, AC013587, AP001544
S/G/Y/R/B/O NT_011059AC013587547162601RH37688  182017.00  1AP001544, AC013587, AP001544
S/G/Y/R/B/O NT_011059AP001544547413361          
S/G/Y/R/B/O NT_011059AC090684547958113RH1265  182017.00  1AC013587, AC013587, AC090684
S/G/Y/R/B/O NT_011059AC090684547985793D18S837    18407.601AC013587, AC013587
S/G/Y/R/B/O NT_011059AC018994548896132AFM357TD5    18403.601AP001457, AC018994, AP001457
S/G/Y/R/B/O NT_011059AC018994549131392RH7443018366.94    1AP001373, AP001457, AC018994, AP001373, AP001457
S/G/Y/R/B/O NT_011059AP001373549882521          
S/G/Y/R/B/O NT_011059AP001457549896761          
S/G/Y/R/B/O NT_011059AC090383549961881          
S/G/Y/R/B/O NT_011059AC007859551117923RH31427  182032.00  1AC022031, AC007859, AC022031
S/G/Y/R/B/O NT_011059AC022031551828423          
S/G/Y/R/B/O NT_011059AC027584552377733          
S/G/Y/R/B/O NT_011059AC026007553490893          
S/G/Y/R/B/O NT_011059AC016165555040693RH33757  181999.00  1AC006305, AC006305, AC016165
S/G/Y/R/B/O NT_011059AC016165555045643RH5552518373.22  18416.301AC006305, AC006305, AC016165, AC090758, AP001909, AP002786
S/G/Y/R/B/O NT_011059AC006305555830863RH29133  182049.00  1 AC006305, AC090758, AP001909, AP002786
S/G/Y/R/B/O NT_011059AC006961556301313          
S/G/Y/R/B/O NT_011059AC021373557995503          
S/G/Y/R/B/O NT_011059AP001592558826641          
S/G/Y/R/B/O NT_011059AC087535558938981          
S/G/Y/R/B/O NT_011059AC027588559115631          
S/G/Y/R/B/O NT_011059AC090296559275001          
S/G/Y/R/B/O NT_011059AP001446559677581          
S/G/Y/R/B/O NT_011059AC012301560219792RH14949  182092.00  1AC090296, AP001446, AC012301, AC090296, AP001446
S/G/Y/R/B/O NT_011059AC012301560220372RH1731018376.50    1AC090296, AP001446, AC012301, AC090296, AP001446
S/G/Y/R/B/O NT_011059AC012301560220752RH7834918379.02    1AC090296, AP001446, AC012301, AC090296, AP001446
S/G/Y/R/B/O NT_011059AC012301560221042RH3922318379.02    1AC090296, AP001446, AC012301, AC090296, AP001446
S/G/Y/R/B/O NT_011059AC008006563173253RH4511218374.40    1 AC008006


  NT_011059 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011059AC007052563724633RH8084  182092.00  1AP001569, AC090230, AC090408, AP001569, AP002424
S/G/Y/R/B/O NT_011059AC007052564480853RH10345218372.67    1AC087535, AP001569, AP001592, AC007052, AC087535, AC090230, AC090408, AP001569, AP001592, AP002424
S/G/Y/R/B/O NT_011059AP001569565326851          
S/G/Y/R/B/O NT_011059 - RH10238018372.59    1AC093462, AC093462, AP001498
S/G/Y/R/B/O NT_011059 - WI-4052    18416.001AC009285, AC009285
S/G/Y/R/B/O NT_011059 - RH10415118372.59    1AC087395, AC090897, AP001564, AC012359, AC073049, AC087395, AC090897, AP001564
S/G/Y/R/B/O NT_011059 - RH1591618375.40    0  
S/G/Y/R/B/O NT_011059 - RH3656818375.59    1AC021325, AC090666, AC021325, AC021714, AC074288, AC090666, AF120994
S/G/Y/R/B/O NT_011059 - RH4518818375.59    1AC087395, AC090897, AP001564, AC012359, AC073049, AC087395, AC090897, AP001564
S/G/Y/R/B/O NT_011059 - RH5548718374.94    1AC078999, AC090660, AC011143, AC078999, AC090660, AP001593
S/G/Y/R/B/O NT_011059 - RH5552218379.02    0  
S/G/Y/R/B/O NT_011059 - RH5563318373.95  18416.001AC021325, AC087688, AC093462, AC021325, AC087688, AC093462, AP001498, AP002408
S/G/Y/R/B/O NT_011059 - RH6791618374.82    1AC021325, AC087688, AC093462, AC021325, AC087688, AC093462, AP001498, AP002408
S/G/Y/R/B/O NT_011059 - RH8053418375.93    1AC087395, AC090897, AP001564, AC012359, AC073049, AC087395, AC090897, AP001564
S/G/Y/R/B/O NT_011059 - RH9183018373.53    1AC026839, AC026839
S/G/Y/R/B/O NT_011059 - RH9861918379.02    1AC021325, AC087688, AC093462, AC021325, AC021714, AC087688, AC093462, AF120989, AP001498, AP002408