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  Chromosome 18 - RH Maps - Single Contig
 

Chromosome 18 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_011005 NT_011036 NT_030854 NT_025000 NT_024990 NT_024982 NT_011090 NT_025112
NT_011024 NT_030853 NT_010870 NT_025037 NT_033304 NT_019631 NT_010956 NT_010918
NT_010859 NT_028384 NT_024983 NT_031911 NT_011044 NT_033311 NT_010966 NT_010924
NT_030852 NT_010934 NT_025022 NT_010911 NT_024981 NT_010988 NT_028380 NT_010902
NT_033310 NT_024989 NT_033306 NT_033307 NT_010874 NT_033905 NT_030857 NT_025058
NT_010893 NT_011059 NT_011085 NT_033908 NT_033907 NT_025116 NT_010895 NT_033906
NT_033911 NT_033308 NT_024992 NT_033910 NT_033909 NT_025001 NT_010948 NT_033300
NT_025028 NT_010940 NT_025004 NT_028385 NT_025024 NT_024997 NT_024980 NT_024988
NT_033302 NT_010883 NT_010879


  NT_010859
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010859AP001198129660171RH9870918107.29    1AP001357, AP001198, AP001357
S/G/Y/R/B/O NT_010859AP001198130325141RH74616  18499.00  1AP001357, AP001198, AP001357
S/G/Y/R/B/O NT_010859AP001198130434281RH6841618111.78    1AP001357, AP001198, AP001357
S/G/Y/R/B/O NT_010859AP001198140005031RH1344318114.8418496.00  1AP002505, AP001198, AP002505
S/G/Y/R/B/O NT_010859AP001357129792711          
S/G/Y/R/B/O NT_010859AC067860130593481          
S/G/Y/R/B/O NT_010859AP002449146138691WI-5506    1889.702AC067860, AC069433, AC067860, AC069433, AP002449
S/G/Y/R/B/O NT_010859AP001010132120311RH3921518109.36    1AP001013, AP001268, AP001010, AP001013, AP001268
S/G/Y/R/B/O NT_010859AP001010132511031RH5557418109.6718557.001893.101AP001013, AP001268, AP001525, AP001010, AP001013, AP001268, AP001525
S/G/Y/R/B/O NT_010859AP001010132522971RH6519118114.51    1AP001013, AP001268, AP001525, AP001010, AP001013, AP001268, AP001525
S/G/Y/R/B/O NT_010859AP001010133308761RH1602718111.04    1AC009827, AC009827, AP001010
S/G/Y/R/B/O NT_010859AC009827131250621RH7972218101.82    1AP001010, AP001013, AC009827, AC011058, AP001010, AP001013
S/G/Y/R/B/O NT_010859AP001013131729841          
S/G/Y/R/B/O NT_010859AP001009133101491AFMB337ZA9    6289.601AP001086, AP001009, AP001086
S/G/Y/R/B/O NT_010859AP001009134020051RH2712118113.08    1AP001525, AP001009, AP001525
S/G/Y/R/B/O NT_010859AP001009134027381RH3922018113.94    1AP001525, AP001009, AP001525
S/G/Y/R/B/O NT_010859AP001009134027661WI-20101    18114.801AP001525, AP001009, AP001525
S/G/Y/R/B/O NT_010859AP001009134028001RH1054418111.57    1AP001525, AP001009, AP001525
S/G/Y/R/B/O NT_010859AP001009135770861RH2699018114.63    1AP001086, AP002443, AP001009, AP001086, AP002443
S/G/Y/R/B/O NT_010859AP001525132535991RH1768  18547.00  1AP001010, AP001013, AP001268, AP001010, AP001013, AP001268, AP001525
S/G/Y/R/B/O NT_010859AP001525132537211RH3926418110.08    1AP001010, AP001013, AP001268, AP001010, AP001013, AP001268, AP001525
S/G/Y/R/B/O NT_010859AP001525147125031RH5560918115.50  1895.101AP001268, AP001268, AP001525
S/G/Y/R/B/O NT_010859AP001086135995301AFMA152WG9    1896.001AP001009, AP002443, AP001009, AP001086, AP002443
S/G/Y/R/B/O NT_010859AP001268133687861RH1594718111.35    1AP001010, AP001013, AP001010, AP001013, AP001268
S/G/Y/R/B/O NT_010859AP001268133688341RH1700618112.66    1AP001010, AP001013, AP001010, AP001013, AP001268
S/G/Y/R/B/O NT_010859AP001268133706381WI-15670    18115.501AP001010, AP001013, AP001010, AP001013, AP001268
S/G/Y/R/B/O NT_010859AP001268133709051CHLC.GCT5D07    18100.901 AP001268
S/G/Y/R/B/O NT_010859AP001268133748811RH6517818111.35    1AP001010, AP001013, AP001010, AP001013, AP001268
S/G/Y/R/B/O NT_010859AP001268133757531RH7051518113.73    1AP001010, AP001013, AP001010, AP001013, AP001268
S/G/Y/R/B/O NT_010859AC019156134080101          
S/G/Y/R/B/O NT_010859AP002439135093241RH1563918115.50    1AC019156, AP002505, AC019156, AP002439, AP002505
S/G/Y/R/B/O NT_010859AP002505139731061RH4851218110.40    1 AP002505
S/G/Y/R/B/O NT_010859AP002443135522831          
S/G/Y/R/B/O NT_010859AC006557137393653WI-4495    1896.401 AC006557
S/G/Y/R/B/O NT_010859AC006557137826823RH2688618119.78    1AP001004, AC006557, AP001004
S/G/Y/R/B/O NT_010859AP001004138286321          
S/G/Y/R/B/O NT_010859AC027800138758341          
S/G/Y/R/B/O NT_010859AC069433140930821RH1726318109.05    1AC067860, AP001357, AC067860, AC069433, AP001357
S/G/Y/R/B/O NT_010859AC069433140948591RH4708718111.45    1AC067860, AP001357, AP002449, AC067860, AC069433, AP001357, AP002449
S/G/Y/R/B/O NT_010859AC069433143625511WI-5506    1889.702AC067860, AP002449, AC067860, AC069433, AP002449
S/G/Y/R/B/O NT_010859AC069433146282041RH1524218105.07  1893.101AC067860, AC067860, AC069433
S/G/Y/R/B/O NT_010859AC053538141981541RH626278375.77  8461.904AC022893, AL137013, AL163204, AL359737, AC022893, AL050303, AL137013, AL163204, AL359737
S/G/Y/R/B/O NT_010859AP001077144436521RH2846418117.06    1AP002449, AP001077, AP002449
S/G/Y/R/B/O NT_010859AP001077144737081SGC31554    1882.401AC007734, AC007734, AP001077
S/G/Y/R/B/O NT_010859AP001077144737081RH554231890.71    1AC007734, AC007734, AP001077
S/G/Y/R/B/O NT_010859AP001077144792001RH392511889.91    1AC007734, AC007734, AP001077
S/G/Y/R/B/O NT_010859AC007734145255391AFMA058YG5    1880.401 AC007734
S/G/Y/R/B/O NT_010859AC007734145412121RH260261889.75    1AP001077, AC007734, AP001077
S/G/Y/R/B/O NT_010859AC007734146799561RH553991899.9918478.001883.001AP001077, AC007734, AP001077
S/G/Y/R/B/O NT_010859 - RH3653618119.45    2AC027800, AP001004, AC027800, AP001004


  NT_010859 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010859 - RH31773  18502.00  1AC012323, AC092378, AC012323, AC092378
S/G/Y/R/B/O NT_010859 - D18S71    1883.800  
S/G/Y/R/B/O NT_010859 - RH4490618116.61    0AP002439, AP002505, AP002439, AP002505
S/G/Y/R/B/O NT_010859 - SGC34655    1885.501AC010966, AP001029, AP001113, AC010966, AP001029, AP001113
S/G/Y/R/B/O NT_010859 - RH7598118117.15    0