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  Chromosome 18 - RH Maps - Single Contig
 

Chromosome 18 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_011005 NT_011036 NT_030854 NT_025000 NT_024990 NT_024982 NT_011090 NT_025112
NT_011024 NT_030853 NT_010870 NT_025037 NT_033304 NT_019631 NT_010956 NT_010918
NT_010859 NT_028384 NT_024983 NT_031911 NT_011044 NT_033311 NT_010966 NT_010924
NT_030852 NT_010934 NT_025022 NT_010911 NT_024981 NT_010988 NT_028380 NT_010902
NT_033310 NT_024989 NT_033306 NT_033307 NT_010874 NT_033905 NT_030857 NT_025058
NT_010893 NT_011059 NT_011085 NT_033908 NT_033907 NT_025116 NT_010895 NT_033906
NT_033911 NT_033308 NT_024992 NT_033910 NT_033909 NT_025001 NT_010948 NT_033300
NT_025028 NT_010940 NT_025004 NT_028385 NT_025024 NT_024997 NT_024980 NT_024988
NT_033302 NT_010883 NT_010879


  NT_011044
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011044AC016839212325131          
S/G/Y/R/B/O NT_011044AC026634213353031RH6981618187.96    1 AC026634, AC073161
S/G/Y/R/B/O NT_011044AC091021215635031SGC35446    18247.201AC021302, AC027229, AP002410, AC021302, AC027229, AC091021, AP002410
S/G/Y/R/B/O NT_011044AC091021215654311RH6740618188.27    1AC021302, AC027229, AP002410, AC021302, AC027229, AC091021, AP002410
S/G/Y/R/B/O NT_011044AC010853216270143RH10342518193.95    1 AC010853, AC091590, AP001771
S/G/Y/R/B/O NT_011044AC010853216329003RH4882618193.95    1 AC010853, AC091590, AP001771
S/G/Y/R/B/O NT_011044AC010853216355883RH6790918193.95    1 AC010853, AC091590, AP001771
S/G/Y/R/B/O NT_011044AC010853216366343RH5555418204.03  18194.601 AC010853, AC091590, AF338230, AP001771
S/G/Y/R/B/O NT_011044AC010853216522643RH1198818192.29    1 AC010853, AC091590, AF338230, AP001771
S/G/Y/R/B/O NT_011044AC010853217051813RH5557218193.85  18196.701 AC010853, AC091590, AP001771
S/G/Y/R/B/O NT_011044AC010853217055943RH5547818190.58  18196.201 AC010853, AC091590, AP001771
S/G/Y/R/B/O NT_011044AC010853217056163RH1199718195.61    1 AC010853, AC091590, AP001771
S/G/Y/R/B/O NT_011044AC067796217765443          
S/G/Y/R/B/O NT_011044AC090366219305773WI-5786    18198.901 AC090366, AP001173
S/G/Y/R/B/O NT_011044AC010754220596713RH3921918198.54    1 AC010754, AP001173, AP001202
S/G/Y/R/B/O NT_011044AC010754220720973D18S1101    18202.801 AC010754, AP001173, AP001202
S/G/Y/R/B/O NT_011044AC010754221251003RH10234918201.82    1AC023989, AC090332, AP001164, AC010754, AC023989, AC090332, AP001164, AP001202
S/G/Y/R/B/O NT_011044AC010754221544473RH7663918205.74    2AC016127, AC023989, AC090332, AP001164, AC010754, AC016127, AC023989, AC090332, AP001164, AP001202
S/G/Y/R/B/O NT_011044AP001177221864561          
S/G/Y/R/B/O NT_011044AC023989221959641          
S/G/Y/R/B/O NT_011044AP001164222042341          
S/G/Y/R/B/O NT_011044AC016127222106911RH7663918205.74    2AC010754, AC023989, AC090332, AP001164, AC010754, AC016127, AC023989, AC090332, AP001164, AP001202
S/G/Y/R/B/O NT_011044AC090772222851421RH1682818190.78    1AC016127, AC023989, AC090332, AP001164, AP001177, AC016127, AC023989, AC090332, AC090772, AP001164, AP001177
S/G/Y/R/B/O NT_011044AC090772222875371RH5547418204.12  18202.301AC023989, AC090332, AC023989, AC090332, AC090772
S/G/Y/R/B/O NT_011044AC090772222939971RH6866818192.80    1AC016127, AC023989, AC090332, AP001164, AP001177, AC016127, AC023989, AC090332, AC090772, AP001164, AP001177
S/G/Y/R/B/O NT_011044AC090772222968251RH3926218191.76    1AC016127, AC016186, AC023989, AC090332, AP001164, AP001177, AC016127, AC016186, AC023989, AC090332, AC090772, AP001164, AP001177
S/G/Y/R/B/O NT_011044AC090772223235331RH9402618193.54    1AC016127, AC023989, AC090332, AP001164, AP001177, AC016127, AC023989, AC090332, AC090772, AP001164, AP001177
S/G/Y/R/B/O NT_011044AC090772223512651RH7482018192.38    1AC016127, AC016185, AC016186, AP001177, AC016127, AC016185, AC016186, AC090772, AP001177
S/G/Y/R/B/O NT_011044AC090772224107671RH5555118201.60  18202.802AC016185, AC016186, AC023983, AP001177, AC016185, AC016186, AC023983, AC090772, AP001177
S/G/Y/R/B/O NT_011044AC090332222315471          
S/G/Y/R/B/O NT_011044AC023983224176391          
S/G/Y/R/B/O NT_011044AC087677224801781          
S/G/Y/R/B/O NT_011044AP002423224836651          
S/G/Y/R/B/O NT_011044AC016185224847871          
S/G/Y/R/B/O NT_011044AP001327224925281          
S/G/Y/R/B/O NT_011044AC090379225002011          
S/G/Y/R/B/O NT_011044AC007922225174122RH6675318200.47    1AC009668, AC023983, AC087677, AC090379, AP001276, AP001327, AP002423, AC007922, AC009668, AC023983, AC087677, AC090379, AP001276, AP001277, AP001327, AP002423, AP002476
S/G/Y/R/B/O NT_011044AC007922225225392RH8101618213.01    1AC009668, AC023983, AC087677, AC090379, AP001276, AP001327, AC007922, AC009668, AC023983, AC087677, AC090379, AP001276, AP001277, AP001327, AP002476
S/G/Y/R/B/O NT_011044AC007922226068562RH7483318208.46    1AC009668, AC090379, AC007922, AC009668, AC090379, AF232229
S/G/Y/R/B/O NT_011044AC007922226329552RH3927118193.43    1AC009668, AC090379, AP001276, AP001327, AP002507, AC007922, AC009668, AC090379, AF232229, AP001276, AP001277, AP001327, AP002476, AP002507
S/G/Y/R/B/O NT_011044AC009668225713401          
S/G/Y/R/B/O NT_011044AP001276225735731          
S/G/Y/R/B/O NT_011044AC090244226927541RH1366818198.14    1AP001327, AC090244, AP001327
S/G/Y/R/B/O NT_011044AC090244227294971AFMB311WH5    18200.001AP002507, AC090244, AP002507
S/G/Y/R/B/O NT_011044AP002507226793671          
S/G/Y/R/B/O NT_011044AC018578228328842RH7031018192.29    1AC022884, AC018578, AC022884
S/G/Y/R/B/O NT_011044AC022884229247101RH159681743.59    2AC025233, AC087500, AC015727, AC015727, AC022884, AC025233, AC087500
S/G/Y/R/B/O NT_011044AC022884229429521RH551031746.79  1763.902AC012146, AC025233, AC074339, AC087500, AC012146, AC022884, AC025233, AC074339, AC087500
S/G/Y/R/B/O NT_011044AC018697230316513RH9415118193.13    1 AC018697
S/G/Y/R/B/O NT_011044AC018697230793723CHLC.GATA85D10    18207.101 AC018697


  NT_011044 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011044AC018697231488043RH5554718206.70  18207.201 AC018697
S/G/Y/R/B/O NT_011044AP001190231558751          
S/G/Y/R/B/O NT_011044AC104961232780782RH3925318207.58    1 AC104961
S/G/Y/R/B/O NT_011044AC105114233525273          
S/G/Y/R/B/O NT_011044AC110603234483252          
S/G/Y/R/B/O NT_011044AC104422235664772          
S/G/Y/R/B/O NT_011044AC100806235980453          
S/G/Y/R/B/O NT_011044AC007768236796863          
S/G/Y/R/B/O NT_011044AC019306238450562          
S/G/Y/R/B/O NT_011044AC011268239324361          
S/G/Y/R/B/O NT_011044AC016665239553151          
S/G/Y/R/B/O NT_011044AC090363239662152          
S/G/Y/R/B/O NT_011044AP001121240474651          
S/G/Y/R/B/O NT_011044AC027229241316181AFMC014WF9    18246.701AP001121, AP001121
S/G/Y/R/B/O NT_011044AC021302242053211          
S/G/Y/R/B/O NT_011044AP002410242243631          
S/G/Y/R/B/O NT_011044 - RH1563718200.15    0