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  Chromosome 18 - RH Maps - Single Contig
 

Chromosome 18 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_011005 NT_011036 NT_030854 NT_025000 NT_024990 NT_024982 NT_011090 NT_025112
NT_011024 NT_030853 NT_010870 NT_025037 NT_033304 NT_019631 NT_010956 NT_010918
NT_010859 NT_028384 NT_024983 NT_031911 NT_011044 NT_033311 NT_010966 NT_010924
NT_030852 NT_010934 NT_025022 NT_010911 NT_024981 NT_010988 NT_028380 NT_010902
NT_033310 NT_024989 NT_033306 NT_033307 NT_010874 NT_033905 NT_030857 NT_025058
NT_010893 NT_011059 NT_011085 NT_033908 NT_033907 NT_025116 NT_010895 NT_033906
NT_033911 NT_033308 NT_024992 NT_033910 NT_033909 NT_025001 NT_010948 NT_033300
NT_025028 NT_010940 NT_025004 NT_028385 NT_025024 NT_024997 NT_024980 NT_024988
NT_033302 NT_010883 NT_010879


  NT_010934
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010934AP001155336085341          
S/G/Y/R/B/O NT_010934AP001159336152121          
S/G/Y/R/B/O NT_010934AP001321336521941SGC31809    18291.601AC023043, AP001155, AP001159, AC023043, AP001155, AP001159, AP001321
S/G/Y/R/B/O NT_010934AP001321336521941WI-22762    18292.201AC023043, AP001155, AP001159, AC023043, AP001155, AP001159, AP001321
S/G/Y/R/B/O NT_010934AP001321336526701RH6758118306.05    1AC023043, AP001155, AP001159, AC023043, AP001155, AP001159, AP001321
S/G/Y/R/B/O NT_010934AP001321336670001WI-4430    18289.701AC023043, AP001155, AP001158, AP001159, AC023043, AP001155, AP001158, AP001159, AP001321
S/G/Y/R/B/O NT_010934AC023043337488161RH10392118295.54    1AP001155, AP001158, AP001321, AC023043, AP001155, AP001158, AP001321
S/G/Y/R/B/O NT_010934AP001158337573061RH3925518299.64    1AC023043, AP001155, AP001321, AC023043, AP001155, AP001158, AP001321
S/G/Y/R/B/O NT_010934AC091060338156732RH5560818293.04  18287.801AP001905, AC091060, AP001905
S/G/Y/R/B/O NT_010934AC091060338974172RH1839518290.36    1AP001195, AP001905, AC091060, AP001195, AP001905
S/G/Y/R/B/O NT_010934AC091060338985852RH5558818292.25  18286.101AP001195, AP001905, AC091060, AP001195, AP001905
S/G/Y/R/B/O NT_010934AC091060339185212RH4709218269.06    1AP001195, AP001905, AC091060, AP001195, AP001905
S/G/Y/R/B/O NT_010934AC091060339325032RH9917318290.40    1AP001195, AP001905, AC091060, AP001195, AP001905
S/G/Y/R/B/O NT_010934AC091060339346472RH8021318290.83    3AF044083, AP001195, AP001905, AC009833, AC091060, AF044083, AL662830, AL671511, AP001195, AP001455, AP001905
S/G/Y/R/B/O NT_010934AC091060339403662RH10431918273.12    1AP001195, AP001905, AC091060, AP001195, AP001905
S/G/Y/R/B/O NT_010934AC091060339510212RH4542918293.94    1AP001195, AP001905, AC091060, AP001195, AP001905
S/G/Y/R/B/O NT_010934AP001195339836231          
S/G/Y/R/B/O NT_010934AC055840341663153RH1327318302.80181231.00  1 AC055840
S/G/Y/R/B/O NT_010934AP002419341925701          
S/G/Y/R/B/O NT_010934AC025679341946122          
S/G/Y/R/B/O NT_010934AC090333344018091WI-3032    18295.402AC009854, AP001281, AC009854, AC090326, AC090333, AP001281, AP001401
S/G/Y/R/B/O NT_010934AC009854344699293RH6557718305.42    2AC090333, AP001281, AC009854, AC090308, AC090326, AC090333, AP001281, AP001323, AP001401
S/G/Y/R/B/O NT_010934AC009854344710563RH5546418309.03  18295.302AC090333, AP001281, AC009854, AC090308, AC090326, AC090333, AP001281, AP001323, AP001401
S/G/Y/R/B/O NT_010934AC009854344711173RH9892718298.00    2AC090333, AP001281, AC009854, AC090308, AC090326, AC090333, AP001281, AP001323, AP001401
S/G/Y/R/B/O NT_010934AC009854344711613RH1066818296.82    2AC090333, AP001281, AC009854, AC090308, AC090326, AC090333, AP001281, AP001323, AP001401
S/G/Y/R/B/O NT_010934AC009854344782313SGC33337    18305.702AC090333, AC009854, AC090333
S/G/Y/R/B/O NT_010934AC009854344874873RH5544318305.02  18295.402AC090333, AP001281, AC009854, AC090308, AC090326, AC090333, AP001281, AP001323, AP001401
S/G/Y/R/B/O NT_010934AC009854345776613RH6634518272.68    1 AC009854, AC090308, AP001323
S/G/Y/R/B/O NT_010934AC016493345791622          
S/G/Y/R/B/O NT_010934AC023577347430983          
S/G/Y/R/B/O NT_010934AC027005348714411RH31420  181246.00  1AC015961, AC015961
S/G/Y/R/B/O NT_010934AC015961349205001WI-5707    18297.101AC015966, AP001175, AC015961, AC015966, AP001175, AP001454
S/G/Y/R/B/O NT_010934AC015961349232191RH5546118287.84  18303.401AC015966, AP001175, AC015961, AC015966, AP001175, AP001454
S/G/Y/R/B/O NT_010934AC015961349233431RH3922418307.96    1AC015966, AP001175, AC015961, AC015966, AP001175, AP001454
S/G/Y/R/B/O NT_010934AC009456349454141          
S/G/Y/R/B/O NT_010934AP001281349473271RH6557718305.42    2AC009854, AC090333, AC009854, AC090308, AC090326, AC090333, AP001281, AP001323, AP001401
S/G/Y/R/B/O NT_010934AP001281349484551RH5546418309.03  18295.302AC009854, AC090333, AC009854, AC090308, AC090326, AC090333, AP001281, AP001323, AP001401
S/G/Y/R/B/O NT_010934AP001281349485161RH9892718298.00    2AC009854, AC090333, AC009854, AC090308, AC090326, AC090333, AP001281, AP001323, AP001401
S/G/Y/R/B/O NT_010934AP001281349485601RH1066818296.82    2AC009854, AC090333, AC009854, AC090308, AC090326, AC090333, AP001281, AP001323, AP001401
S/G/Y/R/B/O NT_010934AP001281349556331SGC33337    18305.702AC009854, AC090333, AC009854, AC090333
S/G/Y/R/B/O NT_010934AP001281349649531RH5544318305.02  18295.402AC009854, AC090333, AC009854, AC090308, AC090326, AC090333, AP001281, AP001323, AP001401
S/G/Y/R/B/O NT_010934AP001281349909351WI-3032    18295.402AC009854, AC090333, AC009854, AC090326, AC090333, AP001281, AP001401
S/G/Y/R/B/O NT_010934AC090386349973421          
S/G/Y/R/B/O NT_010934AC015966350531101          
S/G/Y/R/B/O NT_010934AP001175350534291          
S/G/Y/R/B/O NT_010934AC090209351607091          
S/G/Y/R/B/O NT_010934AC093332351616791          
S/G/Y/R/B/O NT_010934AP002501351766131          
S/G/Y/R/B/O NT_010934AP001338351850861CHLC.GGAT2A06.1030    18297.101AC083840, AP001337, AC083840, AP001337
S/G/Y/R/B/O NT_010934AP001337353565631RH14952  181254.0018303.001 AP001337


  NT_010934 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010934AP001337353565631RH5555218319.45    1 AP001337
S/G/Y/R/B/O NT_010934AC083840352936491          
S/G/Y/R/B/O NT_010934AP001905353741301          
S/G/Y/R/B/O NT_010934 - RH1002918289.37    1AC013290, AC013290, AC015672, AC069131, AC087743, AC090410, AP001571, AP002895
S/G/Y/R/B/O NT_010934 - RH1027318289.33    1AC010798, AC025291, AC087814, AP001203, AC010798, AC025291, AC087814, AP001203, AP002422, AP002753
S/G/Y/R/B/O NT_010934 - RH10324218287.96    1AC013290, AC013290, AC015672, AC069131, AC087743, AC090410, AP001571, AP002895
S/G/Y/R/B/O NT_010934 - RH1210418300.98    0  
S/G/Y/R/B/O NT_010934 - RH1703118292.25    1AF215850, AF215850
S/G/Y/R/B/O NT_010934 - RH1713418291.38    1AC009277, AC068506, AC009277, AC068506, AP001270
S/G/Y/R/B/O NT_010934 - RH3619418291.50    0AC023043, AP001155, AP001158, AP001321, AC023043, AP001155, AP001158, AP001321
S/G/Y/R/B/O NT_010934 - RH3925718288.89    1AC010798, AC025291, AC087814, AC010798, AC025291, AC087814, AP002422, AP002753
S/G/Y/R/B/O NT_010934 - RH3926518288.69    1AC009717, AC021549, AP001358, AC009717, AC021549, AP001106, AP001358
S/G/Y/R/B/O NT_010934 - RH4442218273.92    1AC010798, AC025291, AC087814, AP001203, AC010798, AC025291, AC087814, AP001203, AP002422, AP002753
S/G/Y/R/B/O NT_010934 - RH5550818274.83    1AC022960, AP001333, AC022960, AP001333
S/G/Y/R/B/O NT_010934 - RH5556018288.40    1AC015967, AP001165, AC015967, AC090407, AP001165, AP001364
S/G/Y/R/B/O NT_010934 - RH5560618288.40181207.00  1AC009272, AC009272
S/G/Y/R/B/O NT_010934 - RH6634818276.11    0  
S/G/Y/R/B/O NT_010934 - RH6747518290.24    1AF215850, AF215850
S/G/Y/R/B/O NT_010934 - RH6980218292.25    1AC011815, AC011815
S/G/Y/R/B/O NT_010934 - RH7871018295.54    0  
S/G/Y/R/B/O NT_010934 - RH9225918273.24    1AC090371, AC100845, AC090371, AC100845, AP001123
S/G/Y/R/B/O NT_010934 - RH9325618275.07    0  
S/G/Y/R/B/O NT_010934 - RH9899718290.36    1AC009277, AC068506, AC009277, AC068506, AP001270