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  Chromosome 18 - RH Maps - Single Contig
 

Chromosome 18 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_011005 NT_011036 NT_030854 NT_025000 NT_024990 NT_024982 NT_011090 NT_025112
NT_011024 NT_030853 NT_010870 NT_025037 NT_033304 NT_019631 NT_010956 NT_010918
NT_010859 NT_028384 NT_024983 NT_031911 NT_011044 NT_033311 NT_010966 NT_010924
NT_030852 NT_010934 NT_025022 NT_010911 NT_024981 NT_010988 NT_028380 NT_010902
NT_033310 NT_024989 NT_033306 NT_033307 NT_010874 NT_033905 NT_030857 NT_025058
NT_010893 NT_011059 NT_011085 NT_033908 NT_033907 NT_025116 NT_010895 NT_033906
NT_033911 NT_033308 NT_024992 NT_033910 NT_033909 NT_025001 NT_010948 NT_033300
NT_025028 NT_010940 NT_025004 NT_028385 NT_025024 NT_024997 NT_024980 NT_024988
NT_033302 NT_010883 NT_010879


  NT_033907
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033907AC025660597686581          
S/G/Y/R/B/O NT_033907AC105183597767622RH6764918391.39    1 AC105183
S/G/Y/R/B/O NT_033907AC105183597767862RH1628318406.93    1 AC105183
S/G/Y/R/B/O NT_033907AC110997598353162RH5560318406.82  18452.601AC105094, AC105183, AC105094, AC105183, AC110997
S/G/Y/R/B/O NT_033907AC110997598367972RH32442  182356.00  1AC105094, AC105183, AC105094, AC105183, AC110997
S/G/Y/R/B/O NT_033907AC105094598633602          
S/G/Y/R/B/O NT_033907AC018970599265081          
S/G/Y/R/B/O NT_033907AP002769599425571          
S/G/Y/R/B/O NT_033907AP001654600387341RH10325918394.34    1AC018970, AC090409, AP001655, AP002769, AC018970, AC090409, AP001654, AP001655, AP002769
S/G/Y/R/B/O NT_033907AP001654600388491RH7500218393.50    1AC018970, AC090409, AP001655, AP002769, AC018970, AC090409, AP001654, AP001655, AP002769
S/G/Y/R/B/O NT_033907AP001655600610011          
S/G/Y/R/B/O NT_033907AC090354600885383          
S/G/Y/R/B/O NT_033907AC011123602334061RH5559318406.82  18451.801AC090354, AC090396, AP001460, AC011123, AC090354, AC090396, AP001460, AP001562
S/G/Y/R/B/O NT_033907AC011123602335011RH1061618391.39    1AC090354, AC090396, AP001460, AC011123, AC090354, AC090396, AP001460, AP001562
S/G/Y/R/B/O NT_033907AC011123602335901RH2870018410.41    1AC090354, AC090396, AP001460, AC011123, AC090354, AC090396, AP001460, AP001562
S/G/Y/R/B/O NT_033907AC011123602336391RH6656318408.90    1AC090354, AC090396, AP001460, AC011123, AC090354, AC090396, AP001460, AP001562
S/G/Y/R/B/O NT_033907AC011123602338211RH8092318402.72    1AC090354, AC090396, AP001460, AC011123, AC090354, AC090396, AP001460, AP001562
S/G/Y/R/B/O NT_033907AC011123602346281RH9199118408.90    1AC090396, AC011123, AC090396, AP001562
S/G/Y/R/B/O NT_033907AC090396602759141          
S/G/Y/R/B/O NT_033907AC027514603842531D18S60    18454.101AC090396, AP001460, AP002398, AC027514, AC090396, AP001460, AP002398
S/G/Y/R/B/O NT_033907AC027514603842531RH1331218410.51182353.00  1AC090396, AP001460, AP002398, AC027514, AC090396, AP001460, AP002398
S/G/Y/R/B/O NT_033907AP002398604371581          
S/G/Y/R/B/O NT_033907AP001460604375901          
S/G/Y/R/B/O NT_033907AF298900604945333RH5553018410.51  18454.301AC027514, AC100843, AC027514, AC100843, AF298900
S/G/Y/R/B/O NT_033907AF298900605764353RH9340318408.69    1AC090313, AC100843, AC090313, AC100843, AF298900, AP001545
S/G/Y/R/B/O NT_033907AF298900605888423RH5558318410.41182357.0018454.401 AF298900
S/G/Y/R/B/O NT_033907AF298900605889563RH1822318410.71    1AC090313, AC100843, AC090313, AC100843, AF298900, AP001545
S/G/Y/R/B/O NT_033907AC100843606241883          
S/G/Y/R/B/O NT_033907AC090313607047552RH4711618410.41    1AC064801, AC064801, AC090313, AP001545, AP002790
S/G/Y/R/B/O NT_033907AC064801607547231RH6762618390.67    1 AC064801, AP002790
S/G/Y/R/B/O NT_033907AC064801607647041RH7047718390.75    1 AC064801, AP002790
S/G/Y/R/B/O NT_033907AC064801607647691RH5550118412.95182362.0018455.801 AC064801, AP002790
S/G/Y/R/B/O NT_033907AC064801607649201RH2708818412.74    1 AC064801, AP002790
S/G/Y/R/B/O NT_033907AC064801607665861RH7506018412.72    1AP001584, AC064801, AP001584
S/G/Y/R/B/O NT_033907AP001584607790331          
S/G/Y/R/B/O NT_033907AC022046607798171          
S/G/Y/R/B/O NT_033907AP001397609372931          
S/G/Y/R/B/O NT_033907AC015989610537712RH33459  182374.00  1AP001397, AC015989, AP001397
S/G/Y/R/B/O NT_033907AC015989610537712RH5542218415.99    1AP001397, AC015989, AP001397
S/G/Y/R/B/O NT_033907AC015989610537712SGC34992    18471.601AP001397, AC015989, AP001397
S/G/Y/R/B/O NT_033907AC015989611141132RH6833618429.01    1AC027553, AC015989, AC027553
S/G/Y/R/B/O NT_033907AC027553611284043          
S/G/Y/R/B/O NT_033907AC021299612218781          
S/G/Y/R/B/O NT_033907AC090409613230161          
S/G/Y/R/B/O NT_033907AC006203613580733          
S/G/Y/R/B/O NT_033907AC025656615145742          
S/G/Y/R/B/O NT_033907AC009709616848233          
S/G/Y/R/B/O NT_033907AC026003618600792          
S/G/Y/R/B/O NT_033907AC067981620388122          
S/G/Y/R/B/O NT_033907AC019346621640822          


  NT_033907 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033907AC022171621866251          
S/G/Y/R/B/O NT_033907AC010928622896842WI-4461    18448.101 AC010928, AC090210, AP001903, AP001904, AP002454
S/G/Y/R/B/O NT_033907AC010928623404822WI-10430    18449.101 AC010928, AC090210, AP001903, AP001904, AP002454
S/G/Y/R/B/O NT_033907AC010928624070122CHLC.GATA89B12    18448.101 AC091843, AP001903, AP002454
S/G/Y/R/B/O NT_033907AC091576624428031          
S/G/Y/R/B/O NT_033907AP001645625372961RH7022318400.52    1AC091576, AC091576, AP001645
S/G/Y/R/B/O NT_033907 - RH4770618412.74    0AC064801, AC064801
S/G/Y/R/B/O NT_033907 - RH9136018412.54    0  
S/G/Y/R/B/O NT_033907 - RH9377518408.07    0