Home    Genome Browser    BLAT Search    Help
  Chromosome 18 - RH Maps - Single Contig
 

Chromosome 18 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_011005 NT_011036 NT_030854 NT_025000 NT_024990 NT_024982 NT_011090 NT_025112
NT_011024 NT_030853 NT_010870 NT_025037 NT_033304 NT_019631 NT_010956 NT_010918
NT_010859 NT_028384 NT_024983 NT_031911 NT_011044 NT_033311 NT_010966 NT_010924
NT_030852 NT_010934 NT_025022 NT_010911 NT_024981 NT_010988 NT_028380 NT_010902
NT_033310 NT_024989 NT_033306 NT_033307 NT_010874 NT_033905 NT_030857 NT_025058
NT_010893 NT_011059 NT_011085 NT_033908 NT_033907 NT_025116 NT_010895 NT_033906
NT_033911 NT_033308 NT_024992 NT_033910 NT_033909 NT_025001 NT_010948 NT_033300
NT_025028 NT_010940 NT_025004 NT_028385 NT_025024 NT_024997 NT_024980 NT_024988
NT_033302 NT_010883 NT_010879


  NT_011085
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011085AC084350565863521          
S/G/Y/R/B/O NT_011085AP001772565906531          
S/G/Y/R/B/O NT_011085AC007628567139553RH6660018380.25    1AP001772, AC007628, AP001772
S/G/Y/R/B/O NT_011085AC003971567697743RH4762018381.00    1AC084350, AC090340, AP001772, AC003971, AC084350, AC090340, AP001560, AP001772
S/G/Y/R/B/O NT_011085AC003971567777963RH1228618380.48    1AC084350, AC090340, AP001772, AC003971, AC084350, AC090340, AP001560, AP001772
S/G/Y/R/B/O NT_011085AC003971567778223RH1011518380.37    1AC084350, AC090340, AP001772, AC003971, AC084350, AC090340, AP001560, AP001772
S/G/Y/R/B/O NT_011085AC090340568190941          
S/G/Y/R/B/O NT_011085AC021490569200171          
S/G/Y/R/B/O NT_011085AP001543569542491RH10252918381.88    1AC021490, AC084350, AC021490, AC084350, AP001543
S/G/Y/R/B/O NT_011085AP001543569575731RH3632818381.30    1AC021490, AC084350, AC021490, AC084350, AP001543
S/G/Y/R/B/O NT_011085AJ250235569587203WI-20204    18436.201AP001543, AC009270, AJ250235, AP001543
S/G/Y/R/B/O NT_011085AJ250235569590823RH3921718381.00    1AP001543, AC009270, AJ250235, AP001543
S/G/Y/R/B/O NT_011085AJ250235569594563RH2007  182094.00  1AP001543, AC009270, AJ250235, AP001543, AP002417
S/G/Y/R/B/O NT_011085AC068072569925161RH1751318380.25    1AC027097, AJ250235, AP001543, AC009270, AC027097, AC068072, AJ250235, AP001543, AP002417
S/G/Y/R/B/O NT_011085AC027097570072491RH1946  182089.00  1AC068072, AP001543, AC009270, AC027097, AC068072, AP001543, AP002417
S/G/Y/R/B/O NT_011085AC027097570098061RH3585218381.47    1AC068072, AP001543, AC009270, AC027097, AC068072, AP001543, AP002417
S/G/Y/R/B/O NT_011085AC027097570099221RH5543618381.82  18423.301AC068072, AP001543, AC009270, AC027097, AC068072, AP001543, AP002417
S/G/Y/R/B/O NT_011085AC027097570099571RH1030718381.36    1AC068072, AP001543, AC009270, AC027097, AC068072, AP001543, AP002417
S/G/Y/R/B/O NT_011085AP001780571412181          
S/G/Y/R/B/O NT_011085AC022724571503283          
S/G/Y/R/B/O NT_011085AC090324573204851CHLC.GATA30B03    18430.201AP001487, AC011832, AC090324, AP001487
S/G/Y/R/B/O NT_011085AC090324573244871RH31428  182149.00  1AP001487, AC090324, AP001487
S/G/Y/R/B/O NT_011085AP001487574045221          
S/G/Y/R/B/O NT_011085AC107896575194672RH4882518394.96    1 AC090402, AC107896, AP001491
S/G/Y/R/B/O NT_011085AC107896575922682RH3643618394.96    1AC015988, AC015988, AC090402, AC107896, AP001491
S/G/Y/R/B/O NT_011085AC015988576684103RH7483818394.12    1AC011331, AC090228, AC090236, AC011331, AC015988, AC019039, AC090228, AC090236, AC090402, AP001491, AP001851, AP001991
S/G/Y/R/B/O NT_011085AC011331577398873RH6847418400.05    1AC090228, AC090236, AC011331, AC019039, AC090228, AC090236, AP001851, AP001991
S/G/Y/R/B/O NT_011085AC011331577462173WI-5827    18442.101AC090228, AC090236, AC011331, AC019039, AC090228, AC090236, AP001851, AP001991
S/G/Y/R/B/O NT_011085AC011331577515193WI-3038    18442.001AC090228, AC090236, AC011331, AC019039, AC090228, AC090236, AP001851, AP001991
S/G/Y/R/B/O NT_011085AC011331577591843RH9253418394.65    1AC090228, AC090236, AC011331, AC019039, AC090228, AC090236, AP001851, AP001991
S/G/Y/R/B/O NT_011085AC011331577748583RH6805618395.79    1AC090228, AC090236, AC011331, AC019039, AC090228, AC090236, AP001851, AP001991
S/G/Y/R/B/O NT_011085AC011331578216073RH3923118404.74    1AC079826, AC090228, AC090236, AC011331, AC079826, AC090228, AC090236, AP001851, AP001991
S/G/Y/R/B/O NT_011085AC011331578221053RH5543918393.82  18442.101AC079826, AC090228, AC090236, AC011331, AC079826, AC090228, AC090236, AP001851, AP001991
S/G/Y/R/B/O NT_011085AC011331578225063WI-12140    18443.501AC079826, AC090228, AC090236, AC011331, AC079826, AC090228, AC090236, AP001851
S/G/Y/R/B/O NT_011085AC011331578225063RH5541318401.09    1AC079826, AC090228, AC090236, AC011331, AC079826, AC090228, AC090236, AP001851
S/G/Y/R/B/O NT_011085AC011331578227493RH1679318395.38    1AC079826, AC090228, AC090236, AC011331, AC079826, AC090228, AC090236, AP001851
S/G/Y/R/B/O NT_011085AC011331578234633RH5542518396.20  18442.001AC079826, AC090228, AC090236, AC011331, AC079826, AC090228, AC090236, AP001851, AP001991
S/G/Y/R/B/O NT_011085AC011331578234803RH2714018404.74    1AC079826, AC090228, AC090236, AC011331, AC079826, AC090228, AC090236, AP001851, AP001991
S/G/Y/R/B/O NT_011085AC011331578235463RH1640918394.65    1AC079826, AC090228, AC090236, AC011331, AC079826, AC090228, AC090236, AP001851, AP001991
S/G/Y/R/B/O NT_011085AC011331578260813RH2567818404.74    1AC090228, AC090236, AC011331, AC090228, AC090236, AP001851
S/G/Y/R/B/O NT_011085AC011331578261673RH74604  182307.00  1AC079826, AC090228, AC090236, AC011331, AC079826, AC090228, AC090236, AP001851, AP001991
S/G/Y/R/B/O NT_011085AC090236578273443          
S/G/Y/R/B/O NT_011085AC105105578376942RH5540718400.26  18442.101AC079826, AC079826, AC105105
S/G/Y/R/B/O NT_011085AC105105578989882RH9921318396.50    1AC079826, AC079826, AC105105
S/G/Y/R/B/O NT_011085AC105105579919282RH3640718400.05    2AC079826, AC079826, AC105105
S/G/Y/R/B/O NT_011085AC105105579936582RH3632618395.38    2AC079826, AC079826, AC105105
S/G/Y/R/B/O NT_011085AC105105579951232RH9920218400.05    2AC079826, AC079826, AC105105
S/G/Y/R/B/O NT_011085AC105105579957092RH2649018404.74    2AC079826, AC079826, AC105105
S/G/Y/R/B/O NT_011085AC105105579975482RH7638218386.09    2AC079826, AC079826, AC105105
S/G/Y/R/B/O NT_011085AC105105579998652RH1169818400.05    2AC079826, AC079826, AC105105


  NT_011085 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_011085AC079826578656471RH3640718400.05    2AC105105, AC079826, AC105105
S/G/Y/R/B/O NT_011085AC079826578673761RH3632618395.38    2AC105105, AC079826, AC105105
S/G/Y/R/B/O NT_011085AC079826578688381RH9920218400.05    2AC105105, AC079826, AC105105
S/G/Y/R/B/O NT_011085AC079826578694241RH2649018404.74    2AC105105, AC079826, AC105105
S/G/Y/R/B/O NT_011085AC079826578712631RH7638218386.09    2AC105105, AC079826, AC105105
S/G/Y/R/B/O NT_011085AC079826578735801RH1169818400.05    2AC105105, AC079826, AC105105
S/G/Y/R/B/O NT_011085AC090228580168441          
S/G/Y/R/B/O NT_011085 - RH10325918394.34    1AC018970, AC090409, AP001654, AP001655, AP002769, AC018970, AC090409, AP001654, AP001655, AP002769
S/G/Y/R/B/O NT_011085 - WI-8656    18418.701AC091170, AP001814, AC091170, AP001814
S/G/Y/R/B/O NT_011085 - RH10349318381.53    0  
S/G/Y/R/B/O NT_011085 - WI-10339    18442.100  
S/G/Y/R/B/O NT_011085 - RH1061618391.39    1AC011123, AC090354, AC090396, AP001460, AC011123, AC090354, AC090396, AP001460, AP001562
S/G/Y/R/B/O NT_011085 - RH1588318400.05    0AC011331, AC079826, AC090228, AC090236, AC011331, AC079826, AC090228, AC090236, AP001851, AP001991
S/G/Y/R/B/O NT_011085 - RH3922618399.40    0AC090377, AC107990, AC090377, AC107990, AP001549, AP001776
S/G/Y/R/B/O NT_011085 - RH3923318400.42    0  
S/G/Y/R/B/O NT_011085 - RH3925618396.41    0  
S/G/Y/R/B/O NT_011085 - RH4637518381.88    0  
S/G/Y/R/B/O NT_011085 - RH4638518379.84    1AC016866, AC044840, AP001388, AC016866, AC044840, AC090364, AP001388
S/G/Y/R/B/O NT_011085 - RH6641818381.88    0  
S/G/Y/R/B/O NT_011085 - RH6762618390.67    1AC064801, AC064801, AP002790
S/G/Y/R/B/O NT_011085 - RH6764918391.39    1AC105183, AC105183
S/G/Y/R/B/O NT_011085 - RH7047718390.75    1AC064801, AC064801, AP002790
S/G/Y/R/B/O NT_011085 - RH7500218393.50    1AC018970, AC090409, AP001654, AP001655, AP002769, AC018970, AC090409, AP001654, AP001655, AP002769
S/G/Y/R/B/O NT_011085 - RH7560018394.96    1AC016229, AP001536, AP001901, AC016229, AP001536, AP001901
S/G/Y/R/B/O NT_011085 - RH7668518379.49    1AC015864, AC090395, AC015864, AC068679, AC090395, AP001499
S/G/Y/R/B/O NT_011085 - RH7998518386.25    1AC104365, AC104365
S/G/Y/R/B/O NT_011085 - RH8009418380.83    1AC015864, AC090395, AC015864, AC015960, AC068679, AC090395, AP001499