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  Chromosome 3 - RH Maps - Single Contig
 

Chromosome 3 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_005927 NT_029265 NT_028123 NT_006044 NT_022517 NT_005507 NT_022516 NT_005564
NT_005762 NT_005646 NT_028139 NT_033044 NT_005502 NT_022539 NT_022464 NT_005580
NT_033049 NT_005498 NT_006036 NT_005825 NT_029949 NT_005991 NT_005585 NT_022567
NT_028129 NT_005990 NT_030623 NT_022439 NT_006014 NT_033032 NT_005986 NT_033015
NT_033038 NT_022552 NT_005787 NT_033040 NT_022481 NT_005607 NT_033026 NT_005999
NT_005531 NT_022473 NT_022423 NT_005510 NT_022510 NT_022665 NT_028127 NT_022400
NT_005530 NT_029258 NT_022442 NT_005769 NT_005526 NT_022540 NT_022717 NT_005644
NT_022446 NT_005583 NT_033034 NT_005882 NT_033036 NT_022419 NT_006031 NT_022551
NT_022459 NT_033029 NT_022713 NT_022460 NT_033011 NT_022554 NT_022720 NT_005684
NT_005663 NT_033018 NT_022420 NT_033043 NT_022642 NT_005791 NT_022452 NT_022435
NT_033028 NT_022497 NT_022625 NT_005568 NT_022401 NT_033031 NT_026983 NT_022475
NT_033037 NT_022451 NT_005509 NT_005527 NT_033050 NT_030634 NT_033041 NT_005863
NT_022454 NT_022607 NT_022453 NT_025670 NT_030622 NT_033045 NT_022728 NT_031768
NT_019350 NT_022434 NT_029256 NT_022405 NT_022569 NT_006042 NT_022484 NT_005795
NT_015150 NT_022445 NT_030625 NT_005532 NT_029269 NT_022455 NT_029931 NT_033022
NT_029257 NT_005513 NT_005994 NT_030635 NT_022411 NT_005824 NT_033021 NT_005543
NT_005588 NT_006029 NT_022513 NT_005523 NT_033014 NT_006025 NT_022404 NT_005823
NT_033019 NT_022393 NT_025663 NT_005567 NT_030630 NT_005969 NT_033051 NT_025664
NT_005655 NT_022503 NT_022632 NT_033024 NT_022416 NT_022432 NT_033020 NT_033035
NT_033042 NT_005832 NT_022502 NT_005772 NT_019358 NT_005591 NT_005775 NT_022616
NT_005540 NT_029939 NT_005616 NT_005539 NT_022555 NT_005849 NT_005657 NT_005678
NT_005846 NT_005612 NT_033030 NT_022463 NT_022594 NT_022449 NT_022421 NT_005744
NT_022565 NT_022518 NT_005638 NT_022397 NT_022700 NT_022422 NT_025667 NT_033052
NT_022472 NT_033033 NT_022526 NT_022674 NT_022458 NT_022509 NT_005635 NT_033053
NT_005950 NT_022396 NT_005952 NT_022406 NT_022676 NT_029253 NT_030638 NT_005910
NT_022549 NT_033009 NT_005911 NT_005962 NT_031766 NT_005883 NT_005501 NT_005571
NT_033017 NT_033013 NT_029928 NT_033010 NT_005834 NT_005535 NT_033012 NT_033016
NT_022508


  NT_022434
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022434AC0113181119591441          
S/G/Y/R/B/O NT_022434AC0123401121365251RH587923396.2235194.003483.501AC011318, AC012020, AC107424, AC011318, AC012020, AC012340, AC107424
S/G/Y/R/B/O NT_022434AC0123401121366451RH116773392.84    1AC011318, AC012020, AC107424, AC011318, AC012020, AC012340, AC107424
S/G/Y/R/B/O NT_022434AC0123401121394311RH918153395.94    1AC011318, AC012020, AC107424, AC011318, AC012020, AC012340, AC107424
S/G/Y/R/B/O NT_022434AC0272961119908143RH30089  35181.00  1AC012340, AC107424, AC012340, AC027296, AC107424
S/G/Y/R/B/O NT_022434AC0272961120773123RH654823382.04    1AC011318, AC012340, AC107424, AC011318, AC012340, AC027296, AC092450, AC107424
S/G/Y/R/B/O NT_022434AC1074241121488931RH784193393.80    1AC011318, AC012020, AC012340, AC011318, AC012020, AC012340, AC019297, AC107424
S/G/Y/R/B/O NT_022434AC1074241121493521RH164923395.50    1AC011318, AC012020, AC012340, AC011318, AC012020, AC012340, AC019297, AC107424
S/G/Y/R/B/O NT_022434AC1074241121496741RH476043391.55    1AC011318, AC012020, AC012340, AC011318, AC012020, AC012340, AC019297, AC107424
S/G/Y/R/B/O NT_022434AC1074241121504161RH941843392.40    1AC011318, AC012020, AC012340, AC011318, AC012020, AC012340, AC019297, AC107424
S/G/Y/R/B/O NT_022434AC1074241121511771RH786683395.94    1AC011318, AC012020, AC012340, AC011318, AC012020, AC012340, AC019297, AC107424
S/G/Y/R/B/O NT_022434AC1074241121525661RH587073395.94  3483.401AC011318, AC012020, AC012340, AC011318, AC012020, AC012340, AC019297, AC092450, AC107424
S/G/Y/R/B/O NT_022434AC1074241121525661RH7987  35194.00  1AC011318, AC012020, AC012340, AC011318, AC012020, AC012340, AC019297, AC092450, AC107424
S/G/Y/R/B/O NT_022434AC1074241121525671RH13975  35194.00  1AC011318, AC012020, AC012340, AC011318, AC012020, AC012340, AC019297, AC092450, AC107424
S/G/Y/R/B/O NT_022434AC1074241121526321RH417013395.50    1AC011318, AC012020, AC012340, AC011318, AC012020, AC012340, AC019297, AC092450, AC107424
S/G/Y/R/B/O NT_022434AC1074241121526331RH417083395.61    1AC011318, AC012020, AC012340, AC011318, AC012020, AC012340, AC019297, AC092450, AC107424
S/G/Y/R/B/O NT_022434AC0120201121750163RH581153394.49  3483.901 AC012020, AC019297
S/G/Y/R/B/O NT_022434AC0120201121941833RH582383393.80  3483.401AC019003, AC012020, AC019003, AC019297
S/G/Y/R/B/O NT_022434AC0120201122662983RH582843391.02    1AC019003, AC012020, AC019003, AC019297
S/G/Y/R/B/O NT_022434AC0120201122662983WI-12443    3471.901AC019003, AC012020, AC019003, AC019297
S/G/Y/R/B/O NT_022434AC0120201122662993RH104213392.29    1AC019003, AC012020, AC019003, AC019297
S/G/Y/R/B/O NT_022434AC0120201122664073RH257243395.79    1AC019003, AC012020, AC019003, AC019297
S/G/Y/R/B/O NT_022434AC0120201122673343RH14330  35194.00  1AC019003, AC012020, AC019003, AC019297
S/G/Y/R/B/O NT_022434AC0120201122673783RH263733391.45    1AC019003, AC012020, AC019003, AC019297
S/G/Y/R/B/O NT_022434AC0190031122938441          
S/G/Y/R/B/O NT_022434AC0921971123066181WI-5031    3477.002AC019003, AC078855, AC078856, AC019003, AC078855, AC078856, AC092197
S/G/Y/R/B/O NT_022434AC0788551123606841          
S/G/Y/R/B/O NT_022434AC0207311124153501          
S/G/Y/R/B/O NT_022434AC0694991126722071RH485923392.68    1 AC019169, AC069499
S/G/Y/R/B/O NT_022434AC0926931127115703          
S/G/Y/R/B/O NT_022434AC0921851128185933RH810273393.05    1 AC092185
S/G/Y/R/B/O NT_022434AC0169321129585393RH133953386.0135228.00  1 AC016932
S/G/Y/R/B/O NT_022434AC0801351129817803          
S/G/Y/R/B/O NT_022434AC0169481130433893          
S/G/Y/R/B/O NT_022434 - RH1020523395.50    0  
S/G/Y/R/B/O NT_022434 - RH1021033394.44    0  
S/G/Y/R/B/O NT_022434 - RH166083392.73    1AC023963, AC023963
S/G/Y/R/B/O NT_022434 - RH262233392.95    0  
S/G/Y/R/B/O NT_022434 - RH360903393.80    0  
S/G/Y/R/B/O NT_022434 - RH415913392.84    1AC025415, AC107299, AC025415, AC107299
S/G/Y/R/B/O NT_022434 - RH416523394.01    1AC063944, AC063944, AC067831
S/G/Y/R/B/O NT_022434 - RH422923395.50    1AC079382, AC079382
S/G/Y/R/B/O NT_022434 - RH451163391.87    1AC021983, AC021983
S/G/Y/R/B/O NT_022434 - RH464983395.79    0  
S/G/Y/R/B/O NT_022434 - RH476813393.80    1AC068776, AC068776
S/G/Y/R/B/O NT_022434 - RH480203393.21    0 AC019169
S/G/Y/R/B/O NT_022434 - RH580053392.08    1AC025415, AC107299, AC025415, AC107299
S/G/Y/R/B/O NT_022434 - RH580383392.95    1AC023645, AC092896, AC023645, AC092896
S/G/Y/R/B/O NT_022434 - RH581633395.50    1AC024108, AC074044, AC024108, AC074044
S/G/Y/R/B/O NT_022434 - RH581683394.55    1AC026876, AC072044, AC009893, AC026876, AC072044


  NT_022434 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_022434 - RH582623395.40    1AC068958, AC112487, AC068958, AC112487
S/G/Y/R/B/O NT_022434 - RH582683395.50    1AC025415, AC107299, AC025415, AC107299
S/G/Y/R/B/O NT_022434 - RH583263393.64    1AC063944, AC063944, AC067831
S/G/Y/R/B/O NT_022434 - RH583393393.74    1AC019247, AC055740, AC108693, AC019247, AC055740, AC108693
S/G/Y/R/B/O NT_022434 - RH585193393.21    1AC068958, AC112487, AC068958, AC112487
S/G/Y/R/B/O NT_022434 - RH586013395.94    1AC025415, AC107299, AC025415, AC107299
S/G/Y/R/B/O NT_022434 - RH659213395.29    1AC074043, AC092267, AC107022, AC009651, AC074043, AC092267, AC107022
S/G/Y/R/B/O NT_022434 - RH784833391.98    0  
S/G/Y/R/B/O NT_022434 - RH804903393.48    1AC048334, AC079202, AC024709, AC048334, AC079202, AC079211
S/G/Y/R/B/O NT_022434 - RH936913393.80    1AC023963, AC023963
S/G/Y/R/B/O NT_022434 - RH936953395.94    0  
S/G/Y/R/B/O NT_022434 - RH940303391.98    1AC021983, AC021983