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  Chromosome 3 - RH Maps - Single Contig
 

Chromosome 3 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_005927 NT_029265 NT_028123 NT_006044 NT_022517 NT_005507 NT_022516 NT_005564
NT_005762 NT_005646 NT_028139 NT_033044 NT_005502 NT_022539 NT_022464 NT_005580
NT_033049 NT_005498 NT_006036 NT_005825 NT_029949 NT_005991 NT_005585 NT_022567
NT_028129 NT_005990 NT_030623 NT_022439 NT_006014 NT_033032 NT_005986 NT_033015
NT_033038 NT_022552 NT_005787 NT_033040 NT_022481 NT_005607 NT_033026 NT_005999
NT_005531 NT_022473 NT_022423 NT_005510 NT_022510 NT_022665 NT_028127 NT_022400
NT_005530 NT_029258 NT_022442 NT_005769 NT_005526 NT_022540 NT_022717 NT_005644
NT_022446 NT_005583 NT_033034 NT_005882 NT_033036 NT_022419 NT_006031 NT_022551
NT_022459 NT_033029 NT_022713 NT_022460 NT_033011 NT_022554 NT_022720 NT_005684
NT_005663 NT_033018 NT_022420 NT_033043 NT_022642 NT_005791 NT_022452 NT_022435
NT_033028 NT_022497 NT_022625 NT_005568 NT_022401 NT_033031 NT_026983 NT_022475
NT_033037 NT_022451 NT_005509 NT_005527 NT_033050 NT_030634 NT_033041 NT_005863
NT_022454 NT_022607 NT_022453 NT_025670 NT_030622 NT_033045 NT_022728 NT_031768
NT_019350 NT_022434 NT_029256 NT_022405 NT_022569 NT_006042 NT_022484 NT_005795
NT_015150 NT_022445 NT_030625 NT_005532 NT_029269 NT_022455 NT_029931 NT_033022
NT_029257 NT_005513 NT_005994 NT_030635 NT_022411 NT_005824 NT_033021 NT_005543
NT_005588 NT_006029 NT_022513 NT_005523 NT_033014 NT_006025 NT_022404 NT_005823
NT_033019 NT_022393 NT_025663 NT_005567 NT_030630 NT_005969 NT_033051 NT_025664
NT_005655 NT_022503 NT_022632 NT_033024 NT_022416 NT_022432 NT_033020 NT_033035
NT_033042 NT_005832 NT_022502 NT_005772 NT_019358 NT_005591 NT_005775 NT_022616
NT_005540 NT_029939 NT_005616 NT_005539 NT_022555 NT_005849 NT_005657 NT_005678
NT_005846 NT_005612 NT_033030 NT_022463 NT_022594 NT_022449 NT_022421 NT_005744
NT_022565 NT_022518 NT_005638 NT_022397 NT_022700 NT_022422 NT_025667 NT_033052
NT_022472 NT_033033 NT_022526 NT_022674 NT_022458 NT_022509 NT_005635 NT_033053
NT_005950 NT_022396 NT_005952 NT_022406 NT_022676 NT_029253 NT_030638 NT_005910
NT_022549 NT_033009 NT_005911 NT_005962 NT_031766 NT_005883 NT_005501 NT_005571
NT_033017 NT_033013 NT_029928 NT_033010 NT_005834 NT_005535 NT_033012 NT_033016
NT_022508


  NT_005962
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005962AC0268351935241251RH986033700.97    1 AC026835, AC069464
S/G/Y/R/B/O NT_005962AC1097801924861741          
S/G/Y/R/B/O NT_005962AC0098631924884721          
S/G/Y/R/B/O NT_005962AC1129071924970211RH116113697.10    1AC009863, AB005803, AC009863, AC010952, AC112907
S/G/Y/R/B/O NT_005962AC1129071926814901RH588463700.7638625.003854.501AC009863, AC012149, AC026612, AC072018, AC009863, AC012149, AC026612, AC072018, AC092983, AC112907, M11437
S/G/Y/R/B/O NT_005962AC1129071926828631RH415503700.45    1AC009863, AC012149, AC026612, AC009863, AC012149, AC026612, AC092983, AC112907, M11437
S/G/Y/R/B/O NT_005962AC1129071926829451RH1800  38631.00  1AC009863, AC012149, AC009863, AC012149, AC092983, AC112907, M11437
S/G/Y/R/B/O NT_005962AC1129071926829471RH580203701.17  3855.801AC009863, AC012149, AC026612, AC009863, AC012149, AC026612, AC092983, AC112907, M11437
S/G/Y/R/B/O NT_005962AC1129071926832171RH1029783700.45    1AC009863, AC012149, AC026612, AC009863, AC010952, AC012149, AC026612, AC092983, AC112907
S/G/Y/R/B/O NT_005962AC1129071927003031RH249833700.45    1AC012149, AC012149, AC112907
S/G/Y/R/B/O NT_005962AC0266121925382731          
S/G/Y/R/B/O NT_005962AC0121491927270651RH262793684.85    1AC009863, AC026612, AC072018, AC112907, AC009863, AC012149, AC026612, AC072018, AC092983, AC112907
S/G/Y/R/B/O NT_005962AC0121491927284081RH585693701.17  3855.801AC009863, AC026612, AC072018, AC112907, AC009863, AC012149, AC026612, AC072018, AC092983, AC112907
S/G/Y/R/B/O NT_005962AC0121491927290481RH580573700.5638650.003853.801AC009863, AC026612, AC072018, AC112907, AC009863, AC012149, AC026612, AC072018, AC092983, AC112907
S/G/Y/R/B/O NT_005962AC1046381926071561          
S/G/Y/R/B/O NT_005962AC0666031926152351          
S/G/Y/R/B/O NT_005962AC0224981926538751RH589033701.07  3855.501 AC022498
S/G/Y/R/B/O NT_005962AC0720181926731941          
S/G/Y/R/B/O NT_005962AC0686311927679243RH584543699.0538650.003854.701AC109780, AC068631, AC109780
S/G/Y/R/B/O NT_005962AC0686311927679453RH116073700.14    1AC109780, AC068631, AC109780
S/G/Y/R/B/O NT_005962AC0686311927679983RH416603699.05    1AC109780, AC068631, AC109780
S/G/Y/R/B/O NT_005962AC0686311927759493RH33237  38637.00  1AC109780, AC016926, AC068631, AC109780
S/G/Y/R/B/O NT_005962AC0686311927759493RH581703694.27  3852.201AC109780, AC016926, AC068631, AC109780
S/G/Y/R/B/O NT_005962AC0686311927785883RH991383695.29    1AC109780, AC016926, AC068631, AC109780
S/G/Y/R/B/O NT_005962AC0686311927995533RH8723  38631.00  1AC109780, AB038689, AC016926, AC068631, AC109780, D67013
S/G/Y/R/B/O NT_005962AC0686311927995533RH1350  38637.00  1AC109780, AB038689, AC016926, AC068631, AC109780, D67013
S/G/Y/R/B/O NT_005962AC0686311927995533RH13753  38659.00  1AC109780, AB038689, AC016926, AC068631, AC109780, D67013
S/G/Y/R/B/O NT_005962AC0686311927996153RH471823694.38    1AC109780, AB038689, AC016926, AC068631, AC109780, D67013
S/G/Y/R/B/O NT_005962AC0686311927997713RH415533699.05    1AC109780, AB038689, AC016926, AC068631, AC109780, D67013
S/G/Y/R/B/O NT_005962AC0686311927997933RH116953694.38    1AC109780, AC016926, AC109780
S/G/Y/R/B/O NT_005962AC0686311928012733RH37954  38661.00  1AC109780, AB038689, AC068631, AC109780, D67013
S/G/Y/R/B/O NT_005962AC0686311928013193RH761663699.73    1AC109780, AB038689, AC068631, AC109780, D67013
S/G/Y/R/B/O NT_005962AC0686311928013463RH916023699.05    1AC109780, AB038689, AC068631, AC109780, D67013
S/G/Y/R/B/O NT_005962AC0686311928028373RH804563699.22    1AC109780, AB038689, AC016926, AC068631, AC109780, D67013
S/G/Y/R/B/O NT_005962AC0686311928235813RH580523699.5338612.003854.001AC008763, AC021153, AC109780, AC008763, AC016926, AC021153, AC068631, AC109780
S/G/Y/R/B/O NT_005962AC0686311928350893RH584913694.32  3852.201AC109780, AC016926, AC068631, AC109780
S/G/Y/R/B/O NT_005962AC0686311928350893RH260043698.91    1AC109780, AC016926, AC068631, AC109780
S/G/Y/R/B/O NT_005962AC0686311928799253RH686143697.30    1 AC016926, AC068631, AF242198
S/G/Y/R/B/O NT_005962AC0686311928813093RH415473697.30    1 AC016926, AC068631, AF242198
S/G/Y/R/B/O NT_005962AC0686311929149313RH54603697.30  3853.101 AC016926, AC068631
S/G/Y/R/B/O NT_005962AC0686311929150653RH284  38585.00  1 AC016926, AC068631
S/G/Y/R/B/O NT_005962AC0076901929596523          
S/G/Y/R/B/O NT_005962AC0074881931449243RH416973701.58    1 AC007488
S/G/Y/R/B/O NT_005962AC0074881931462073RH416383701.58    1 AC007488
S/G/Y/R/B/O NT_005962AC0074881931462523RH166253701.48    1 AC007488
S/G/Y/R/B/O NT_005962AC0074881931473533RH585573700.7638668.003854.801 AC007488
S/G/Y/R/B/O NT_005962AC0690691932410033          
S/G/Y/R/B/O NT_005962AC0079201932865943RH362323701.58    1AC034190, AC007920, AC034190, AC046154, AC072019
S/G/Y/R/B/O NT_005962AC0079201932878283RH939863701.58    1AC034190, AC007920, AC034190, AC072019
S/G/Y/R/B/O NT_005962AC0079201932898733RH414653701.58    1AC034190, AB007617, AC007920, AC034190, AC046154, AC072019


  NT_005962 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005962AC0079201933168253RH582703700.56  3853.501AC034190, AC034190
S/G/Y/R/B/O NT_005962AC0079201933168743RH162333701.58    1AC034190, AC068299, AC007920, AC034190, AC046154, AC068299, AC072019
S/G/Y/R/B/O NT_005962AC0079201933176563RH124353700.97    1AC034190, AC068299, AC007920, AC034190, AC046154, AC068299, AC072019
S/G/Y/R/B/O NT_005962AC0079201933217513RH586253701.58  3856.001AC034190, AC068299, AC007920, AC034190, AC068299, AC072019
S/G/Y/R/B/O NT_005962AC0079201933267813RH588083701.58  3856.001AC068299, AC007920, AC046154, AC068299, AC072019
S/G/Y/R/B/O NT_005962AC0079201933269613RH123573701.58    1AC068299, AC007920, AC046154, AC068299, AC072019
S/G/Y/R/B/O NT_005962AC0079201934064663WI-2573    3855.301AC068299, AC007920, AC068299, AC072019
S/G/Y/R/B/O NT_005962AC0682991934417741RH415723701.58    1 AC068299
S/G/Y/R/B/O NT_005962AC0341901935008971          
S/G/Y/R/B/O NT_005962AC1046351935076541          
S/G/Y/R/B/O NT_005962AC0683181935452631          
S/G/Y/R/B/O NT_005962AC0189191936189513          
S/G/Y/R/B/O NT_005962AC0720221937998961RH257323701.58    1AC009653, AC034185, AC083854, AC009653, AC034184, AC034185, AC072022, AC083854, J00306
S/G/Y/R/B/O NT_005962AC0720221938009381RH265233701.28    1AC009653, AC083854, AC009653, AC034184, AC072022, AC083854, J00306
S/G/Y/R/B/O NT_005962AC0720221938591611RH585293694.32  3852.901 AC072022
S/G/Y/R/B/O NT_005962AC0720221938591881RH765973701.48    1 AC072022
S/G/Y/R/B/O NT_005962AC0720221938592161RH705203701.58    1 AC072022
S/G/Y/R/B/O NT_005962AC0720221938622551RH477163700.97    1AC080010, AC072022, AC080010
S/G/Y/R/B/O NT_005962AC0720221938755561RH586663700.56  3853.801AC080010, AC072022, AC080010
S/G/Y/R/B/O NT_005962AC0720221938755561RH698013704.81    1AC080010, AC072022, AC080010
S/G/Y/R/B/O NT_005962AC0720221938814151RH478623700.97    1 AC072022, Z79581
S/G/Y/R/B/O NT_005962AC0838541937878061          
S/G/Y/R/B/O NT_005962AC0341851937899291          
S/G/Y/R/B/O NT_005962AC0096531937904801          
S/G/Y/R/B/O NT_005962AC0800101939560821          
S/G/Y/R/B/O NT_005962AC0214141939613271          
S/G/Y/R/B/O NT_005962AC1086811939613333          
S/G/Y/R/B/O NT_005962AC0682951939906803          
S/G/Y/R/B/O NT_005962AC0260151941505761          
S/G/Y/R/B/O NT_005962AC0929411941687591          
S/G/Y/R/B/O NT_005962AC1124791941687851          
S/G/Y/R/B/O NT_005962 - RH106093698.73    1AC078797, AC078797
S/G/Y/R/B/O NT_005962 - RH14592  38664.00  1AC018809, AC007783, AC018809, AC022007, AC024612, AC026196, AC068099
S/G/Y/R/B/O NT_005962 - WI-9782    3855.500  
S/G/Y/R/B/O NT_005962 - RH32998  38655.00  1AC018808, AC018828, AC022384, AC008032, AC018808, AC018828, AC022383, AC022384, AC023236, AC034193, AC069337, AC069461, AF010238
S/G/Y/R/B/O NT_005962 - RH33413  38645.00  1AC008116, AC022384, AC090841, AC008116, AC012515, AC012600, AC022384, AC090841, AF296558
S/G/Y/R/B/O NT_005962 - RH587413701.58  3855.800AC007488, AC007488, AC037196
S/G/Y/R/B/O NT_005962 - RH763243699.12    0  
S/G/Y/R/B/O NT_005962 - RH787063700.14    0