Chromosome 3 - RH Maps - Single Contig

Chromosome 3 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_005927	NT_029265	NT_028123	NT_006044	NT_022517	NT_005507	NT_022516	NT_005564
NT_005762	NT_005646	NT_028139	NT_033044	NT_005502	NT_022539	NT_022464	NT_005580
NT_033049	NT_005498	NT_006036	NT_005825	NT_029949	NT_005991	NT_005585	NT_022567
NT_028129	NT_005990	NT_030623	NT_022439	NT_006014	NT_033032	NT_005986	NT_033015
NT_033038	NT_022552	NT_005787	NT_033040	NT_022481	NT_005607	NT_033026	NT_005999
NT_005531	NT_022473	NT_022423	NT_005510	NT_022510	NT_022665	NT_028127	NT_022400
NT_005530	NT_029258	NT_022442	NT_005769	NT_005526	NT_022540	NT_022717	NT_005644
NT_022446	NT_005583	NT_033034	NT_005882	NT_033036	NT_022419	NT_006031	NT_022551
NT_022459	NT_033029	NT_022713	NT_022460	NT_033011	NT_022554	NT_022720	NT_005684
NT_005663	NT_033018	NT_022420	NT_033043	NT_022642	NT_005791	NT_022452	NT_022435
NT_033028	NT_022497	NT_022625	NT_005568	NT_022401	NT_033031	NT_026983	NT_022475
NT_033037	NT_022451	NT_005509	NT_005527	NT_033050	NT_030634	NT_033041	NT_005863
NT_022454	NT_022607	NT_022453	NT_025670	NT_030622	NT_033045	NT_022728	NT_031768
NT_019350	NT_022434	NT_029256	NT_022405	NT_022569	NT_006042	NT_022484	NT_005795
NT_015150	NT_022445	NT_030625	NT_005532	NT_029269	NT_022455	NT_029931	NT_033022
NT_029257	NT_005513	NT_005994	NT_030635	NT_022411	NT_005824	NT_033021	NT_005543
NT_005588	NT_006029	NT_022513	NT_005523	NT_033014	NT_006025	NT_022404	NT_005823
NT_033019	NT_022393	NT_025663	NT_005567	NT_030630	NT_005969	NT_033051	NT_025664
NT_005655	NT_022503	NT_022632	NT_033024	NT_022416	NT_022432	NT_033020	NT_033035
NT_033042	NT_005832	NT_022502	NT_005772	NT_019358	NT_005591	NT_005775	NT_022616
NT_005540	NT_029939	NT_005616	NT_005539	NT_022555	NT_005849	NT_005657	NT_005678
NT_005846	NT_005612	NT_033030	NT_022463	NT_022594	NT_022449	NT_022421	NT_005744
NT_022565	NT_022518	NT_005638	NT_022397	NT_022700	NT_022422	NT_025667	NT_033052
NT_022472	NT_033033	NT_022526	NT_022674	NT_022458	NT_022509	NT_005635	NT_033053
NT_005950	NT_022396	NT_005952	NT_022406	NT_022676	NT_029253	NT_030638	NT_005910
NT_022549	NT_033009	NT_005911	NT_005962	NT_031766	NT_005883	NT_005501	NT_005571
NT_033017	NT_033013	NT_029928	NT_033010	NT_005834	NT_005535	NT_033012	NT_033016
NT_022508

NT_030623

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_030623	AC104311	49186092	1	RH104350	3	156.77					1		AC104311
S/G/Y/R/B/O	NT_030623	AC104311	49189816	1	RH12595	3	156.66					1		AC104311
S/G/Y/R/B/O	NT_030623	AC104311	49248948	1	RH41590	3	156.66					1	AC012124,	AC012124, AC104311
S/G/Y/R/B/O	NT_030623	AC104311	49300499	1	SGC31529					3	191.40	1	AC012124,	AC012124, AC104311
S/G/Y/R/B/O	NT_030623	AC104311	49300499	1	RH58366	3	158.34	3	2044.00			1	AC012124,	AC012124, AC104311
S/G/Y/R/B/O	NT_030623	AC104311	49300561	1	RH41677	3	158.01					1	AC012124,	AC012124, AC104311
S/G/Y/R/B/O	NT_030623	AC104311	49359734	1	WI-21449					3	196.70	1		AC104311
S/G/Y/R/B/O	NT_030623	AC104311	49359911	1	RH41491	3	157.66					1
S/G/Y/R/B/O	NT_030623	AC104311	49404045	1	RH79955	3	158.12					1		AC104311
S/G/Y/R/B/O	NT_030623	AC012124	49198396	1	WI-3585					3	191.50	1		AC012124
S/G/Y/R/B/O	NT_030623	AC012124	49212175	1	RH58734	3	157.89			3	195.20	1		AC012124, M83094
S/G/Y/R/B/O	NT_030623	AC012124	49212228	1	RH45222	3	158.12					1		AC012124, M83094
S/G/Y/R/B/O	NT_030623	AC012124	49214139	1	RH58446	3	158.23			3	195.20	1		AC012124, M83094
S/G/Y/R/B/O	NT_030623	AC012124	49214146	1	TIGR-A004T30					3	195.20	1		AC012124, M83094
S/G/Y/R/B/O	NT_030623	AC012124	49214146	1	RH58132	3	158.62					1		AC012124, M83094
S/G/Y/R/B/O	NT_030623	AC012124	49214324	1	RH91501	3	158.23					1		AC012124, M83094
S/G/Y/R/B/O	NT_030623	AC012124	49301082	1	RH41918	3	157.33					1	AC104311,	AC012124, AC104311
S/G/Y/R/B/O	NT_030623	AC012124	49301100	1	RH45172	3	158.23					1	AC104311,	AC012124, AC104311
S/G/Y/R/B/O	NT_030623	AC012124	49301126	1	RH18550	3	158.12					1	AC104311,	AC012124, AC104311
S/G/Y/R/B/O	NT_030623	AC012124	49319503	1	RH58388	3	158.23			3	193.40	1	AC104311,	AC012124, AC104311
S/G/Y/R/B/O	NT_030623	AC012124	49341962	1	CHLC.ATA10H11					3	193.40	1		AC012124
S/G/Y/R/B/O	NT_030623	AC012124	49349921	1	RH58414	3	158.07			3	193.40	1		AC012124
S/G/Y/R/B/O	NT_030623		-		RH102329	3	158.12					0
S/G/Y/R/B/O	NT_030623		-		RH1968			3	2066.00			0
S/G/Y/R/B/O	NT_030623		-		WI-11317					3	188.00	0	AC069495,	AC069495
S/G/Y/R/B/O	NT_030623		-		RH102367	3	157.55					0
S/G/Y/R/B/O	NT_030623		-		RH104439	3	158.12					0
S/G/Y/R/B/O	NT_030623		-		RH16356	3	156.89					0
S/G/Y/R/B/O	NT_030623		-		RH17372	3	158.12					0	AC087503, AC104452,	AC087503, AC104452
S/G/Y/R/B/O	NT_030623		-		RH26169	3	157.66					0		L33842, L39210
S/G/Y/R/B/O	NT_030623		-		RH36171	3	157.33					0
S/G/Y/R/B/O	NT_030623		-		RH41629	3	157.22					0
S/G/Y/R/B/O	NT_030623		-		RH41949	3	157.78					1	AC099332, Z98043,	AC025032, AC099332, Z98043
S/G/Y/R/B/O	NT_030623		-		RH46444	3	157.33					0
S/G/Y/R/B/O	NT_030623		-		RH58265	3	157.55					0
S/G/Y/R/B/O	NT_030623		-		RH58860	3	157.66			3	194.40	0		L33842, L39210
S/G/Y/R/B/O	NT_030623		-		RH65515	3	158.23					1	AC068753, AC092057,	AC068753, AC092057
S/G/Y/R/B/O	NT_030623		-		RH66314	3	157.44					0
S/G/Y/R/B/O	NT_030623		-		RH67021	3	157.89					1	AC027141, AC090365,	AC027141, AC090365, AP001127
S/G/Y/R/B/O	NT_030623		-		RH71169	3	158.01					0
S/G/Y/R/B/O	NT_030623		-		RH75441	3	158.12					0
S/G/Y/R/B/O	NT_030623		-		RH78497	3	157.55					0		L33842, L39210
S/G/Y/R/B/O	NT_030623		-		RH80256	3	157.05					0
S/G/Y/R/B/O	NT_030623		-		RH98159	3	158.12					0
S/G/Y/R/B/O	NT_030623		-		RH92027	3	157.95					0
S/G/Y/R/B/O	NT_030623		-		RH93145	3	157.44					0
S/G/Y/R/B/O	NT_030623		-		RH93462	3	157.55					0
S/G/Y/R/B/O	NT_030623		-		RH98247	3	158.23					0