Chromosome 3 - RH Maps - Single Contig

Chromosome 3 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_005927	NT_029265	NT_028123	NT_006044	NT_022517	NT_005507	NT_022516	NT_005564
NT_005762	NT_005646	NT_028139	NT_033044	NT_005502	NT_022539	NT_022464	NT_005580
NT_033049	NT_005498	NT_006036	NT_005825	NT_029949	NT_005991	NT_005585	NT_022567
NT_028129	NT_005990	NT_030623	NT_022439	NT_006014	NT_033032	NT_005986	NT_033015
NT_033038	NT_022552	NT_005787	NT_033040	NT_022481	NT_005607	NT_033026	NT_005999
NT_005531	NT_022473	NT_022423	NT_005510	NT_022510	NT_022665	NT_028127	NT_022400
NT_005530	NT_029258	NT_022442	NT_005769	NT_005526	NT_022540	NT_022717	NT_005644
NT_022446	NT_005583	NT_033034	NT_005882	NT_033036	NT_022419	NT_006031	NT_022551
NT_022459	NT_033029	NT_022713	NT_022460	NT_033011	NT_022554	NT_022720	NT_005684
NT_005663	NT_033018	NT_022420	NT_033043	NT_022642	NT_005791	NT_022452	NT_022435
NT_033028	NT_022497	NT_022625	NT_005568	NT_022401	NT_033031	NT_026983	NT_022475
NT_033037	NT_022451	NT_005509	NT_005527	NT_033050	NT_030634	NT_033041	NT_005863
NT_022454	NT_022607	NT_022453	NT_025670	NT_030622	NT_033045	NT_022728	NT_031768
NT_019350	NT_022434	NT_029256	NT_022405	NT_022569	NT_006042	NT_022484	NT_005795
NT_015150	NT_022445	NT_030625	NT_005532	NT_029269	NT_022455	NT_029931	NT_033022
NT_029257	NT_005513	NT_005994	NT_030635	NT_022411	NT_005824	NT_033021	NT_005543
NT_005588	NT_006029	NT_022513	NT_005523	NT_033014	NT_006025	NT_022404	NT_005823
NT_033019	NT_022393	NT_025663	NT_005567	NT_030630	NT_005969	NT_033051	NT_025664
NT_005655	NT_022503	NT_022632	NT_033024	NT_022416	NT_022432	NT_033020	NT_033035
NT_033042	NT_005832	NT_022502	NT_005772	NT_019358	NT_005591	NT_005775	NT_022616
NT_005540	NT_029939	NT_005616	NT_005539	NT_022555	NT_005849	NT_005657	NT_005678
NT_005846	NT_005612	NT_033030	NT_022463	NT_022594	NT_022449	NT_022421	NT_005744
NT_022565	NT_022518	NT_005638	NT_022397	NT_022700	NT_022422	NT_025667	NT_033052
NT_022472	NT_033033	NT_022526	NT_022674	NT_022458	NT_022509	NT_005635	NT_033053
NT_005950	NT_022396	NT_005952	NT_022406	NT_022676	NT_029253	NT_030638	NT_005910
NT_022549	NT_033009	NT_005911	NT_005962	NT_031766	NT_005883	NT_005501	NT_005571
NT_033017	NT_033013	NT_029928	NT_033010	NT_005834	NT_005535	NT_033012	NT_033016
NT_022508

NT_005950

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_005950	AC079618	185464310	1
S/G/Y/R/B/O	NT_005950	AC068361	185469358	1
S/G/Y/R/B/O	NT_005950	AC015620	185471025	1
S/G/Y/R/B/O	NT_005950	AC090425	185531423	1	RH12631	3	672.56					1		AC090425
S/G/Y/R/B/O	NT_005950	AC090425	185567096	1	RH26338	3	674.38					1	AC068361,	AC068361, AC090425
S/G/Y/R/B/O	NT_005950	AC090425	185567457	1	RH41584	3	672.56					1	AC068361,	AC068361, AC090425
S/G/Y/R/B/O	NT_005950	AC007620	185675059	3	RH47636	3	676.43					1		AC007620
S/G/Y/R/B/O	NT_005950	AC007620	185706657	3	RH102917	3	671.06					1	AC079618,	AC007620, AC079618
S/G/Y/R/B/O	NT_005950	AC007620	185749508	3	RH99053	3	674.48					2	AC007823, AC079618,	AC007620, AC007823, AC079618
S/G/Y/R/B/O	NT_005950	AC007620	185754876	3	RH48978	3	679.73					2	AC007823,	AC007620, AC007823
S/G/Y/R/B/O	NT_005950	AC007620	185754926	3	RH67311	3	674.48					2	AC007823,	AC007620, AC007823
S/G/Y/R/B/O	NT_005950	AC007620	185754961	3	RH41642	3	674.98					2	AC007823,	AC007620, AC007823
S/G/Y/R/B/O	NT_005950	AC007620	185755056	3	RH80931	3	675.18					2	AC007823,	AC007620, AC007823
S/G/Y/R/B/O	NT_005950	AC007620	185758636	3	RH58472	3	676.52			3	820.50	2	AC007823,	AC007620, AC007823
S/G/Y/R/B/O	NT_005950	AC007620	185762460	3	RH92241	3	674.48					2	AC007823,	AC007620, AC007823
S/G/Y/R/B/O	NT_005950	AC007687	185802578	3	WI-3735					3	822.90	1	AC015620, AC068361,	AC007687, AC015620, AC068361
S/G/Y/R/B/O	NT_005950	AC007687	185857778	3	D3S3565					3	820.50	1	AC015620,	AC007653, AC007687, AC015620, AC048335
S/G/Y/R/B/O	NT_005950	AC007687	185857778	3	RH58087	3	672.56					1	AC015620,	AC007653, AC007687, AC015620, AC048335
S/G/Y/R/B/O	NT_005950	AC007687	185879625	3	RH93958	3	679.36					1	AC015620,	AC007653, AC007687, AC015620, AC048335
S/G/Y/R/B/O	NT_005950	AC007687	185882649	3	RH99087	3	676.22					1	AC015620,	AC007653, AC007687, AC015620, AC048335
S/G/Y/R/B/O	NT_005950	AC007687	185888634	3	RH38259			3	8314.00			1	AC015620,	AC007653, AC007687, AC015620, AC048335
S/G/Y/R/B/O	NT_005950	AC007687	185888751	3	RH78237	3	678.64					1	AC015620,	AC007653, AC007687, AC015620, AC048335
S/G/Y/R/B/O	NT_005950	AC007687	185894736	3	WI-16592					3	820.50	1	AC015620,	AC007653, AC007687, AC015620, AC048335
S/G/Y/R/B/O	NT_005950	AC007687	185894736	3	RH58067	3	672.56					1	AC015620,	AC007653, AC007687, AC015620, AC048335
S/G/Y/R/B/O	NT_005950	AC007687	185894861	3	RH10460	3	671.03					1	AC015620,	AC007653, AC007687, AC015620, AC048335
S/G/Y/R/B/O	NT_005950	AC007687	185894944	3	RH91221	3	676.22					1	AC015620,	AC007653, AC007687, AC015620, AC048335
S/G/Y/R/B/O	NT_005950	AC007687	185894944	3	RH93473	3	672.56					1	AC015620,	AC007653, AC007687, AC015620, AC048335
S/G/Y/R/B/O	NT_005950	AC092939	186036508	3	RH67271	3	674.68					1		AC073147, AC074352, AC092928, AC092939
S/G/Y/R/B/O	NT_005950	AC092939	186100048	3	RH58113	3	675.29			3	826.30	1	AC069201,	AC069201, AC073147, AC074352, AC092928, AC092939
S/G/Y/R/B/O	NT_005950	AC092939	186100048	3	RH32420			3	8261.00			1	AC069201,	AC069201, AC073147, AC074352, AC092928, AC092939
S/G/Y/R/B/O	NT_005950	AC090024	186122698	3
S/G/Y/R/B/O	NT_005950	AC069201	186225181	1
S/G/Y/R/B/O	NT_005950		-		RH12069	3	676.73					0
S/G/Y/R/B/O	NT_005950		-		WI-3103					3	825.00	1	AC110992,	AC110992