Chromosome 3 - RH Maps - Single Contig

Chromosome 3 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_005927	NT_029265	NT_028123	NT_006044	NT_022517	NT_005507	NT_022516	NT_005564
NT_005762	NT_005646	NT_028139	NT_033044	NT_005502	NT_022539	NT_022464	NT_005580
NT_033049	NT_005498	NT_006036	NT_005825	NT_029949	NT_005991	NT_005585	NT_022567
NT_028129	NT_005990	NT_030623	NT_022439	NT_006014	NT_033032	NT_005986	NT_033015
NT_033038	NT_022552	NT_005787	NT_033040	NT_022481	NT_005607	NT_033026	NT_005999
NT_005531	NT_022473	NT_022423	NT_005510	NT_022510	NT_022665	NT_028127	NT_022400
NT_005530	NT_029258	NT_022442	NT_005769	NT_005526	NT_022540	NT_022717	NT_005644
NT_022446	NT_005583	NT_033034	NT_005882	NT_033036	NT_022419	NT_006031	NT_022551
NT_022459	NT_033029	NT_022713	NT_022460	NT_033011	NT_022554	NT_022720	NT_005684
NT_005663	NT_033018	NT_022420	NT_033043	NT_022642	NT_005791	NT_022452	NT_022435
NT_033028	NT_022497	NT_022625	NT_005568	NT_022401	NT_033031	NT_026983	NT_022475
NT_033037	NT_022451	NT_005509	NT_005527	NT_033050	NT_030634	NT_033041	NT_005863
NT_022454	NT_022607	NT_022453	NT_025670	NT_030622	NT_033045	NT_022728	NT_031768
NT_019350	NT_022434	NT_029256	NT_022405	NT_022569	NT_006042	NT_022484	NT_005795
NT_015150	NT_022445	NT_030625	NT_005532	NT_029269	NT_022455	NT_029931	NT_033022
NT_029257	NT_005513	NT_005994	NT_030635	NT_022411	NT_005824	NT_033021	NT_005543
NT_005588	NT_006029	NT_022513	NT_005523	NT_033014	NT_006025	NT_022404	NT_005823
NT_033019	NT_022393	NT_025663	NT_005567	NT_030630	NT_005969	NT_033051	NT_025664
NT_005655	NT_022503	NT_022632	NT_033024	NT_022416	NT_022432	NT_033020	NT_033035
NT_033042	NT_005832	NT_022502	NT_005772	NT_019358	NT_005591	NT_005775	NT_022616
NT_005540	NT_029939	NT_005616	NT_005539	NT_022555	NT_005849	NT_005657	NT_005678
NT_005846	NT_005612	NT_033030	NT_022463	NT_022594	NT_022449	NT_022421	NT_005744
NT_022565	NT_022518	NT_005638	NT_022397	NT_022700	NT_022422	NT_025667	NT_033052
NT_022472	NT_033033	NT_022526	NT_022674	NT_022458	NT_022509	NT_005635	NT_033053
NT_005950	NT_022396	NT_005952	NT_022406	NT_022676	NT_029253	NT_030638	NT_005910
NT_022549	NT_033009	NT_005911	NT_005962	NT_031766	NT_005883	NT_005501	NT_005571
NT_033017	NT_033013	NT_029928	NT_033010	NT_005834	NT_005535	NT_033012	NT_033016
NT_022508

NT_005772

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_005772	AC072028	149670222	3	RH58139	3	516.31	3	6852.00	3	652.20	1		AC072028
S/G/Y/R/B/O	NT_005772	AC072028	149707628	3	RH46027	3	517.73					1		AC072028
S/G/Y/R/B/O	NT_005772	AC072028	149739061	3	RH46321	3	516.41					1		AC072028
S/G/Y/R/B/O	NT_005772	AC022291	149765769	3	RH38078			3	6852.00			1	AC013554,	AC013554, AC022291
S/G/Y/R/B/O	NT_005772	AC022291	149765913	3	RH10044	4	556.93	4	6643.00			1	AC013554,	AC013554, AC022291
S/G/Y/R/B/O	NT_005772	AC022291	149765913	3	RH79185	3	516.41					1	AC013554,	AC013554, AC022291
S/G/Y/R/B/O	NT_005772	AC022291	149765919	3	RH10842	3	516.31					1	AC013554,	AC013554, AC022291
S/G/Y/R/B/O	NT_005772	AC013554	149772820	1
S/G/Y/R/B/O	NT_005772	AC021074	149776088	3	RH58250	3	516.41	3	6852.00	3	653.10	1	AC013554,	AC013554, AC021074, AC079593
S/G/Y/R/B/O	NT_005772	AC021074	149776163	3	RH12324	3	517.93					1	AC013554,	AC013554, AC021074, AC079593
S/G/Y/R/B/O	NT_005772	AC021074	149900476	3	RH58103	3	516.41			3	652.20	1	AC013554,	AC013554, AC021074, AC079593
S/G/Y/R/B/O	NT_005772	AC021074	149903690	3	RH58208	3	516.51					1	AC013554,	AC013554, AC021074, AC079593
S/G/Y/R/B/O	NT_005772	AC021074	149903690	3	SGC34062					3	651.30	1	AC013554,	AC013554, AC021074, AC079593
S/G/Y/R/B/O	NT_005772	AC021074	149908193	3	RH70276	3	516.41					1	AC013554, AC026304,	AC013554, AC021074, AC026304, AC079593
S/G/Y/R/B/O	NT_005772	AC021074	149913199	3	RH42814			3	6847.00			1	AC013554, AC026304,	AC013554, AC020648, AC021074, AC026304, AC079593
S/G/Y/R/B/O	NT_005772	AC021074	149914165	3	RH66190	3	517.73					1	AC013554, AC026304,	AC013554, AC020648, AC021074, AC026304, AC079593
S/G/Y/R/B/O	NT_005772	AC021074	149914426	3	RH58722	3	516.41			3	652.10	1	AC013554, AC026304,	AC013554, AC020648, AC021074, AC026304, AC079593
S/G/Y/R/B/O	NT_005772	AC021074	149914464	3	RH94214	3	516.41					1	AC013554, AC026304,	AC013554, AC020648, AC021074, AC026304, AC079593
S/G/Y/R/B/O	NT_005772	AC021074	149919445	3	RH38016			3	6841.00			1	AC013554, AC026304,	AC013554, AC020648, AC021074, AC026304, AC079593
S/G/Y/R/B/O	NT_005772	AC021074	149923905	3	RH58350	3	516.41			3	652.40	1	AC026304,	AC020648, AC021074, AC026304, AC079593
S/G/Y/R/B/O	NT_005772	AC021074	149954916	3	RH49491	3	516.41	3	6859.00			1	AC026304, AC055737,	AC020648, AC021074, AC026304, AC055737
S/G/Y/R/B/O	NT_005772	AC026304	149956905	1
S/G/Y/R/B/O	NT_005772	AC018450	149977745	3	RH58525	3	517.93					1	AC026304, AC055737,	AC018450, AC020648, AC026304, AC055737
S/G/Y/R/B/O	NT_005772	AC018450	149977745	3	SGC38133					3	656.80	1	AC026304, AC055737,	AC018450, AC020648, AC026304, AC055737
S/G/Y/R/B/O	NT_005772	AC018450	149989405	3	WI-618					3	656.10	1	AC026304, AC055737,	AC018450, AC020648, AC026304, AC055737
S/G/Y/R/B/O	NT_005772	AC018450	150009615	3	RH58146	3	516.41			3	652.40	1	AC026304, AC055737,	AC018450, AC020648, AC026304, AC055737
S/G/Y/R/B/O	NT_005772	AC018450	150011187	3	RH68747	3	516.41					1	AC026304, AC055737,	AC018450, AC020648, AC026304, AC055737
S/G/Y/R/B/O	NT_005772	AC018450	150014715	3	RH41635	3	516.31					1	AC026304, AC055737,	AC018450, AC020648, AC026304, AC055737
S/G/Y/R/B/O	NT_005772	AC018450	150015674	3	RH66197	3	517.93					1	AC055737,	AC018450, AC020648, AC055737
S/G/Y/R/B/O	NT_005772	AC018450	150018157	3	RH17112	3	516.41					1	AC026304, AC055737,	AC018450, AC020648, AC026304, AC055737
S/G/Y/R/B/O	NT_005772	AC018450	150018203	3	RH12741	3	516.41					1	AC026304, AC055737,	AC018450, AC020648, AC026304, AC055737
S/G/Y/R/B/O	NT_005772	AC018450	150018454	3	RH41573	3	516.31					1	AC026304,	AC018450, AC020648, AC026304
S/G/Y/R/B/O	NT_005772	AC018450	150080787	3	RH7946			3	6878.00			1	AC055737,	AB021125, AC018450, AC055737
S/G/Y/R/B/O	NT_005772	AC018450	150081073	3	RH28590	3	516.41					1	AC055737,	AB021125, AC018450, AC055737
S/G/Y/R/B/O	NT_005772	AC018450	150081949	3	RH76095	3	516.41					1	AC055737,	AC018450, AC055737
S/G/Y/R/B/O	NT_005772	AC018450	150130902	3	RH46351	3	517.93					1	AC013805,	AC013805, AC018450
S/G/Y/R/B/O	NT_005772	AC013805	150219768	1	RH32791			3	6884.00			1		AC013805, AC026673
S/G/Y/R/B/O	NT_005772	AC013805	150240973	1	RH75652	3	516.31					1	AC097108,	AC013805, AC097108
S/G/Y/R/B/O	NT_005772	AC013805	150242244	1	RH16165	3	516.41					1		AC013805
S/G/Y/R/B/O	NT_005772	AC055737	150263282	1
S/G/Y/R/B/O	NT_005772		-		RH26762	3	515.39					0
S/G/Y/R/B/O	NT_005772		-		RH41641	3	516.41					0
S/G/Y/R/B/O	NT_005772		-		RH41683	3	517.79					0
S/G/Y/R/B/O	NT_005772		-		RH58413	3	514.59			3	651.60	0
S/G/Y/R/B/O	NT_005772		-		RH58863	3	515.39			3	652.20	0
S/G/Y/R/B/O	NT_005772		-		RH75925	3	514.59					0
S/G/Y/R/B/O	NT_005772		-		WI-2971					3	653.10	0
S/G/Y/R/B/O	NT_005772		-		RH78504	3	516.41					0