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  Chromosome 7 - RH Maps - Single Contig
 

Chromosome 7 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_029998 NT_007968 NT_033967 NT_033174 NT_033965 NT_007819 NT_033177 NT_023530
NT_030008 NT_033968 NT_023629 NT_028235 NT_030001 NT_033184 NT_033969 NT_007758
NT_007834 NT_017168 NT_033966 NT_033176 NT_033964 NT_007930 NT_029999 NT_033180
NT_007912 NT_023632 NT_007933 NT_030012 NT_023649 NT_007688 NT_027067 NT_033179
NT_033181 NT_007914 NT_033182 NT_033175 NT_007666 NT_007905 NT_007741 NT_028233


  NT_030001
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_030001AC104789581533313          
S/G/Y/R/B/O NT_030001AC092585582953793          
S/G/Y/R/B/O NT_030001AC069285584734383RH155307313.0372741.00  1 AC069285
S/G/Y/R/B/O NT_030001AC069285585883443CHLC.GATA87B05    7312.301 AC069285
S/G/Y/R/B/O NT_030001AC092001586047793          
S/G/Y/R/B/O NT_030001AC006455586291353          
S/G/Y/R/B/O NT_030001AC073188587665193          
S/G/Y/R/B/O NT_030001AC006457588296473          
S/G/Y/R/B/O NT_030001AC006015589682423RH270084468.10    2AC093376, AC006015, AC069152, AC093376
S/G/Y/R/B/O NT_030001AC079355590740523          
S/G/Y/R/B/O NT_030001AC092634592939843RH1800021123.39    2AP000226, AL163239, AP000087, AP000139, AP000226, AP001694
S/G/Y/R/B/O NT_030001AC115220594044383          
S/G/Y/R/B/O NT_030001AC091685595183543          
S/G/Y/R/B/O NT_030001AC104094595889103RH585843600.65  3736.302AC108738, AL354720, AC108738, AL354720
S/G/Y/R/B/O NT_030001AC073270597493473SGC30452    7297.601 AC073270
S/G/Y/R/B/O NT_030001AC022202598077693          
S/G/Y/R/B/O NT_030001AC016769599719453WI-5909    7327.001 AC016769
S/G/Y/R/B/O NT_030001AC016769600858213RH32922  72792.00  1 AC016769
S/G/Y/R/B/O NT_030001AC016769600859103RH265137378.78    1 AC016769
S/G/Y/R/B/O NT_030001AC091799601351553RH476891613.23    2Z99943, Z99943
S/G/Y/R/B/O NT_030001AC073349601527183          
S/G/Y/R/B/O NT_030001AC092161603057513RH42826  72772.00  1 AC092161
S/G/Y/R/B/O NT_030001AC073210603373903          
S/G/Y/R/B/O NT_030001AC104073606072163RH1819  72813.00  3AC073107, AC104057, AP002812, AC073107, AC104057, AC104073, AC105425, AP002377, AP002812
S/G/Y/R/B/O NT_030001AC092685607154563          
S/G/Y/R/B/O NT_030001AC114501608127373          
S/G/Y/R/B/O NT_030001AC104092609450763          
S/G/Y/R/B/O NT_030001AC104057609612583RH982297580.11    3AC000367, AC073107, AC000367, AC006346, AC073107, AC104057, AC104057
S/G/Y/R/B/O NT_030001AC104057610399263RH982297580.11    3AC000367, AC073107, AC000367, AC006346, AC073107, AC104057, AC104057
S/G/Y/R/B/O NT_030001AC104057611131683RH1819  72813.00  3AC073107, AC104073, AP002812, AC073107, AC104057, AC104073, AC105425, AP002377, AP002812
S/G/Y/R/B/O NT_030001AC073107611430333          
S/G/Y/R/B/O NT_030001AC093582612211053          
S/G/Y/R/B/O NT_030001AC093485613103293          
S/G/Y/R/B/O NT_030001AC073261613289293RH31014  72836.00  1 AC073261, AC091765
S/G/Y/R/B/O NT_030001AC068533614705183RH664027379.56    3 AC024641, AC027550, AC068533, AF376770
S/G/Y/R/B/O NT_030001AC068533614920093RH469132251.14    4AP000346, AP000347, AC024641, AC027550, AC068533, AF376770, AP000346, AP000347
S/G/Y/R/B/O NT_030001AC068533615538363RH1024597383.65    1 AC068533
S/G/Y/R/B/O NT_030001AC079855615579043          
S/G/Y/R/B/O NT_030001AC026281617056273RH687197378.43    1 AC026281
S/G/Y/R/B/O NT_030001AC026281617121793RH459137380.69    1 AC026281
S/G/Y/R/B/O NT_030001AC008267617496543RH805307377.07    1 AC008267
S/G/Y/R/B/O NT_030001AC008267617594313RH406337383.65    1  
S/G/Y/R/B/O NT_030001AC008267617595833RH33759  72857.00  1 AC008267
S/G/Y/R/B/O NT_030001AC008267617595893RH809497376.36    1 AC008267
S/G/Y/R/B/O NT_030001AC008267617769903RH464327380.35    1 AC008267
S/G/Y/R/B/O NT_030001AC008267618227883RH412375295.39    2AC097313, AC008267, AC097313
S/G/Y/R/B/O NT_030001AC008267618473663RH184277379.44    3AC005077, AC005077, AC008267
S/G/Y/R/B/O NT_030001AC008267619252463RH464767399.78    1 AC008267
S/G/Y/R/B/O NT_030001AC006001620391243RH8561  72890.00  1 AC006001
S/G/Y/R/B/O NT_030001AC006001620420833RH780087381.78    1 AC006001


  NT_030001 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_030001AC006001620695723RH702467379.00    1 AC006001
S/G/Y/R/B/O NT_030001AC079588620795263          
S/G/Y/R/B/O NT_030001AC027644620887523RH476687380.69    1AC006001, AC006001, AC027644
S/G/Y/R/B/O NT_030001AC027644621033103RH687807377.74    1 AC027644
S/G/Y/R/B/O NT_030001AC027644621769743RH184277379.44    3AC005077, AC008267, AC005077, AC008267
S/G/Y/R/B/O NT_030001AC027644622085413RH1022817382.98    1 AC027644
S/G/Y/R/B/O NT_030001AC027644622109243RH363737384.94    1 AC027644
S/G/Y/R/B/O NT_030001AC073335622715823          
S/G/Y/R/B/O NT_030001AC079920623552383RH407237376.49    1 AC079920
S/G/Y/R/B/O NT_030001AC079920623577743RH108457381.1372878.00  1 AC079920
S/G/Y/R/B/O NT_030001AC079920623577763RH791877379.79    1 AC079920
S/G/Y/R/B/O NT_030001AC073089625004203RH797207379.79    1AC091738, AC069291, AC073089, AC091738, AP000425
S/G/Y/R/B/O NT_030001AC073089625923673RH361407384.18    1 AC073089
S/G/Y/R/B/O NT_030001AC006480626386733RH127237384.51    2AC092536, AC006480, AC092536
S/G/Y/R/B/O NT_030001AC006480626509193RH33849  72900.00  1 AC006480
S/G/Y/R/B/O NT_030001AC006480626717773RH359567397.42    1 AC006480
S/G/Y/R/B/O NT_030001AC006480627020713RH14757  72903.00  1 AC006480
S/G/Y/R/B/O NT_030001AC006480627444973RH780217388.71    1 AC006480
S/G/Y/R/B/O NT_030001AC006480627608183RH8362  72900.00  1 AC006480
S/G/Y/R/B/O NT_030001AC099758627936813          
S/G/Y/R/B/O NT_030001AC108513629617061RH1021617389.63    2AC005482, AC005482, AC108513
S/G/Y/R/B/O NT_030001AC011054629708491          
S/G/Y/R/B/O NT_030001 - RH109477323.79    1AC093376, AC093376
S/G/Y/R/B/O NT_030001 - RH133437391.34    1AC005482, AC005482
S/G/Y/R/B/O NT_030001 - RH651227303.59    0AC079355, AC079355, AC079355, AC079355, AC079355, AC079355, AC079355, AC079355, AC093636, AC023016, AC023016, AC023016, AC023016, AC023016, AC023016, AC023016, AC079355, AC079355, AC079355, AC079355, AC079355, AC079355, AC079355, AC079355, AC093636