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  Chromosome 7 - RH Maps - Single Contig
 

Chromosome 7 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_029998 NT_007968 NT_033967 NT_033174 NT_033965 NT_007819 NT_033177 NT_023530
NT_030008 NT_033968 NT_023629 NT_028235 NT_030001 NT_033184 NT_033969 NT_007758
NT_007834 NT_017168 NT_033966 NT_033176 NT_033964 NT_007930 NT_029999 NT_033180
NT_007912 NT_023632 NT_007933 NT_030012 NT_023649 NT_007688 NT_027067 NT_033179
NT_033181 NT_007914 NT_033182 NT_033175 NT_007666 NT_007905 NT_007741 NT_028233


  NT_007758
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007758AC005482635865143RH1021617389.63    2AC108513, AC005482, AC108513
S/G/Y/R/B/O NT_007758AC005482636092243RH671  72907.00  1 AC005482
S/G/Y/R/B/O NT_007758AC005482636092243RH133437391.34    1 AC005482
S/G/Y/R/B/O NT_007758AC080073637295913          
S/G/Y/R/B/O NT_007758AC092648637846663          
S/G/Y/R/B/O NT_007758AC092637639545473          
S/G/Y/R/B/O NT_007758AC006013640791903          
S/G/Y/R/B/O NT_007758AC093655642361873          
S/G/Y/R/B/O NT_007758AC073216643539083          
S/G/Y/R/B/O NT_007758AC025540643540783          
S/G/Y/R/B/O NT_007758AC084438645129743          
S/G/Y/R/B/O NT_007758AC004910647011213WI-7515    7353.801 AC004910
S/G/Y/R/B/O NT_007758AC004929647475273RH31015  72942.00  1 AC004929
S/G/Y/R/B/O NT_007758AC079897648523433          
S/G/Y/R/B/O NT_007758AC006337649914913RH31736  72960.00  1 AC006337
S/G/Y/R/B/O NT_007758AC104688650296993          
S/G/Y/R/B/O NT_007758AC093693650904003RH1737  72967.00  1 AC093693
S/G/Y/R/B/O NT_007758AC069305651206733          
S/G/Y/R/B/O NT_007758AC069280651989553RH67837401.86  7346.601 AC069280
S/G/Y/R/B/O NT_007758AC092100653322613          
S/G/Y/R/B/O NT_007758AC004966654523603          
S/G/Y/R/B/O NT_007758AC006012655844443          
S/G/Y/R/B/O NT_007758AC006361657115373RH406507413.33    1 AC006361, AP002361
S/G/Y/R/B/O NT_007758AC006318658266673RH618677409.76  7359.401 AC006318
S/G/Y/R/B/O NT_007758AC006318659032013RH69327409.8673003.007359.501 AC006318
S/G/Y/R/B/O NT_007758AC006318659032013RH505  73003.00  1 AC006318
S/G/Y/R/B/O NT_007758AC006319659477013RH31738  73016.00  1 AC006319
S/G/Y/R/B/O NT_007758AC006319659784023RH753747409.96    1 AC006319
S/G/Y/R/B/O NT_007758AC006317660487693RH614857412.49  7363.701 AC006317
S/G/Y/R/B/O NT_007758AC006317660888273RH284597409.86    1  
S/G/Y/R/B/O NT_007758AC093487661644963          
S/G/Y/R/B/O NT_007758AC073148662006443RH283187413.92    1 AC073148
S/G/Y/R/B/O NT_007758AC073148662299643RH365527409.76    1 AC073148
S/G/Y/R/B/O NT_007758AC073148662516063RH616937409.76  7358.801 AC073148
S/G/Y/R/B/O NT_007758AC073148663106433RH8367  73210.00  1 AC073148
S/G/Y/R/B/O NT_007758AC073148663106773RH917747412.29    1 AC073148
S/G/Y/R/B/O NT_007758AC004773664564573RH689557415.02    1AC093685, AC004773, AC093685
S/G/Y/R/B/O NT_007758AC093685664865413          
S/G/Y/R/B/O NT_007758AC004881664904563          
S/G/Y/R/B/O NT_007758AC004927666522403RH486317428.92    1 AC004927
S/G/Y/R/B/O NT_007758AC093679667249643RH618847415.24  7368.701 AC093679
S/G/Y/R/B/O NT_007758AC073873667525893RH615927413.92  7365.901 AC073873
S/G/Y/R/B/O NT_007758AC073873667525893RH33366  74801.00  1 AC073873
S/G/Y/R/B/O NT_007758AC073873667527673RH358917415.24    1 AC073873
S/G/Y/R/B/O NT_007758AC073873668088443RH361417409.66    1 AC073873
S/G/Y/R/B/O NT_007758AC092029669263763          
S/G/Y/R/B/O NT_007758AC073278669295083          
S/G/Y/R/B/O NT_007758AC004963671283153          
S/G/Y/R/B/O NT_007758AC079398672999423          
S/G/Y/R/B/O NT_007758AC004874673616233          


  NT_007758 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007758AC091731674556103          
S/G/Y/R/B/O NT_007758AC092021675678633          
S/G/Y/R/B/O NT_007758AC073330676660923RH31740  73081.00  1 AC073330
S/G/Y/R/B/O NT_007758AC073330677299213RH617997428.76  7369.001AC006334, AC006334, AC073330
S/G/Y/R/B/O NT_007758AC073330677299743RH747737413.23    1AC006334, AC006334, AC073330
S/G/Y/R/B/O NT_007758AC073330677300213RH662967416.94    1AC006334, AC006334, AC073330
S/G/Y/R/B/O NT_007758AC006334677962363RH444797417.57    1 AC006334
S/G/Y/R/B/O NT_007758AC006334677976953RH262147415.46    1 AC006334
S/G/Y/R/B/O NT_007758AC006334677996993RH617757414.24  7370.101 AC006334
S/G/Y/R/B/O NT_007758AC006334677997203RH171057417.57    1 AC006334
S/G/Y/R/B/O NT_007758AC006334678179903CHLC.GATA21D12    7368.901 AC006334
S/G/Y/R/B/O NT_007758AC004905678520403RH258937414.76    1 AC004905
S/G/Y/R/B/O NT_007758AC004905678520703RH8520  73127.00  1 AC004905
S/G/Y/R/B/O NT_007758AC004905678530133RH32316  73110.00  1 AC004905
S/G/Y/R/B/O NT_007758AC004905678530483RH615387416.77  7383.401 AC004905
S/G/Y/R/B/O NT_007758AC004905678531213RH167227418.09    1 AC004905
S/G/Y/R/B/O NT_007758AC004905679237893D7S1776    7378.901 AC004905
S/G/Y/R/B/O NT_007758AC005011679605653RH613527414.76  7368.901 AC005011
S/G/Y/R/B/O NT_007758AC004845681188063          
S/G/Y/R/B/O NT_007758AC092785681884533          
S/G/Y/R/B/O NT_007758AC067941682210023RH119927417.25    1 AC002527, AC067941
S/G/Y/R/B/O NT_007758AC067941682853993RH744697420.5273399.00  1 AC002527, AC067941
S/G/Y/R/B/O NT_007758AC067941683940093D7S653    7387.401 AC067941
S/G/Y/R/B/O NT_007758AC092424684141753RH514  73409.00  1 AC092424
S/G/Y/R/B/O NT_007758AC092424684719043AFMA217XH1    7404.901 AC008576, AC092424
S/G/Y/R/B/O NT_007758AC092536685913003RH127237384.51    2AC006480, AC006480, AC092536
S/G/Y/R/B/O NT_007758AC091738686201503          
S/G/Y/R/B/O NT_007758AC105447687500783          
S/G/Y/R/B/O NT_007758AC114816687820873          
S/G/Y/R/B/O NT_007758AC114731687939493          
S/G/Y/R/B/O NT_007758AC005236688593763RH1965  73284.00  1 AC005236
S/G/Y/R/B/O NT_007758AC005488689570923RH453397420.62    2AC073841, AC005488, AC073841
S/G/Y/R/B/O NT_007758AC005488689689263RH1321  73348.00  3AC006014, AC073841, AC005488, AC006014, AC073841, AC115106, AC115108
S/G/Y/R/B/O NT_007758AC005488689693163RH619157424.10  7399.703AC006014, AC073841, AC005488, AC006014, AC073841, AC115106, AC115108
S/G/Y/R/B/O NT_007758AC005488689702903RH766937426.29    3AC006014, AC073841, AC005488, AC006014, AC073841, AC115106, AC115108
S/G/Y/R/B/O NT_007758AC005488689706573RH1044327425.56    3AC006014, AC073841, AC005488, AC006014, AC073841, AC115106, AC115108
S/G/Y/R/B/O NT_007758AC005488689818483RH407387424.51    3AC006014, AC073841, AC005488, AC006014, AC073841, AC115106, AC115108
S/G/Y/R/B/O NT_007758AC005488690167843RH266267423.57    4AC004867, AC006014, AC061712, AC073841, AC115107, AC004867, AC005098, AC005488, AC006014, AC061712, AC073841, AC105418, AC115107, AC115108
S/G/Y/R/B/O NT_007758AC005488690195013D7S489    7394.704AC005049, AC006014, AC061712, AC115107, AC005049, AC005488, AC006014, AC061712, AC105418, AC115107, AC115108
S/G/Y/R/B/O NT_007758AC005488690196653RH38639  73344.00  5AC004166, AC004867, AC005049, AC006014, AC061712, AC115107, AC004166, AC004867, AC005049, AC005098, AC005488, AC006014, AC061712, AC105418, AC115107, AC115108
S/G/Y/R/B/O NT_007758AC005488690198443RH108357424.40    4AC004166, AC004867, AC006014, AC061712, AC115107, AC004166, AC004867, AC005098, AC005488, AC006014, AC061712, AC105418, AC115107, AC115108
S/G/Y/R/B/O NT_007758AC005488690227713RH619627427.8873527.007391.804AC004166, AC004867, AC006014, AC061712, AC073842, AC115107, AC004166, AC004867, AC005098, AC005488, AC006014, AC061712, AC073842, AC105418, AC115107, AC115108
S/G/Y/R/B/O NT_007758AC006995691396263RH676587426.95    3AC004166, AC061712, AC004166, AC005080, AC006995, AC027219, AC061712, AC105418, AC115105
S/G/Y/R/B/O NT_007758AC006995691396803RH406667428.37    3AC005071, AC005073, AC061712, AC092483, AC005071, AC005073, AC006995, AC027219, AC061712, AC092483, AC105418
S/G/Y/R/B/O NT_007758AC006995691710983RH251577425.56    3AC004166, AC061712, AC083884, AC004166, AC004883, AC005080, AC005098, AC006995, AC027219, AC061712, AC083884, AC105418, AC115105
S/G/Y/R/B/O NT_007758AC006995691714293RH806547424.40    3AC004166, AC061712, AC083884, AC004166, AC004883, AC005080, AC005098, AC006995, AC027219, AC061712, AC083884, AC105418, AC115105
S/G/Y/R/B/O NT_007758AC006995691721803RH8557  73380.00  3AC004166, AC061712, AC083884, AC004166, AC004883, AC005080, AC005098, AC006995, AC027219, AC061712, AC083884, AC105418, AC115105
S/G/Y/R/B/O NT_007758AC006995691722883RH617087423.57  7399.203AC004166, AC061712, AC083884, AC004166, AC004883, AC005080, AC005098, AC006995, AC027219, AC061712, AC083884, AC105418, AC115105
S/G/Y/R/B/O NT_007758AC006995691722883RH98737424.40    3AC004166, AC061712, AC083884, AC004166, AC004883, AC005080, AC005098, AC006995, AC027219, AC061712, AC083884, AC105418, AC115105
S/G/Y/R/B/O NT_007758AC006995691728683RH616747422.74  7398.403AC004166, AC061712, AC083884, AC004166, AC004883, AC005080, AC005098, AC006995, AC027219, AC061712, AC083884, AC105418, AC115105


  NT_007758 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007758AC073841692519793RH266267423.57    4AC004867, AC005488, AC006014, AC061712, AC115107, AC004867, AC005098, AC005488, AC006014, AC061712, AC073841, AC105418, AC115107, AC115108
S/G/Y/R/B/O NT_007758AC073841692553593RH453397420.62    2AC005488, AC005488, AC073841
S/G/Y/R/B/O NT_007758AC073841692675653RH1321  73348.00  3AC005488, AC006014, AC005488, AC006014, AC073841, AC115106, AC115108
S/G/Y/R/B/O NT_007758AC073841692679553RH619157424.10  7399.703AC005488, AC006014, AC005488, AC006014, AC073841, AC115106, AC115108
S/G/Y/R/B/O NT_007758AC073841692689293RH766937426.29    3AC005488, AC006014, AC005488, AC006014, AC073841, AC115106, AC115108
S/G/Y/R/B/O NT_007758AC073841692692953RH1044327425.56    3AC005488, AC006014, AC005488, AC006014, AC073841, AC115106, AC115108
S/G/Y/R/B/O NT_007758AC073841692843673RH407387424.51    3AC005488, AC006014, AC005488, AC006014, AC073841, AC115106, AC115108
S/G/Y/R/B/O NT_007758AC073841692908863D7S1778    7398.402AC006014, AC006014, AC073841, AC115106, AC115108
S/G/Y/R/B/O NT_007758AC005049693815003RH266267423.57    4AC004867, AC005488, AC006014, AC061712, AC073841, AC115107, AC004867, AC005098, AC005488, AC006014, AC061712, AC073841, AC105418, AC115107, AC115108
S/G/Y/R/B/O NT_007758AC005049693861633D7S489    7394.704AC005488, AC006014, AC061712, AC115107, AC005049, AC005488, AC006014, AC061712, AC105418, AC115107, AC115108
S/G/Y/R/B/O NT_007758AC005049693863273RH38639  73344.00  5AC004166, AC004867, AC005488, AC006014, AC061712, AC115107, AC004166, AC004867, AC005049, AC005098, AC005488, AC006014, AC061712, AC105418, AC115107, AC115108
S/G/Y/R/B/O NT_007758AC005049694020263RH759347423.04    1 AC005049
S/G/Y/R/B/O NT_007758AC005074694313173RH659727423.57    1 AC005074
S/G/Y/R/B/O NT_007758AC005089695026083RH696077425.85    1 AC005089
S/G/Y/R/B/O NT_007758AC005089695026573RH406647423.65    1 AC005089
S/G/Y/R/B/O NT_007758AC005089695026583RH795677427.88    1 AC005089
S/G/Y/R/B/O NT_007758AC005089695359243RH615577422.74  7398.401 AC005089, AF097485
S/G/Y/R/B/O NT_007758AC005089695359243RH101027428.2173330.00  1 AC005089, AF097485
S/G/Y/R/B/O NT_007758AC005089695596223RH649197423.57    1 AC005089, AF156673
S/G/Y/R/B/O NT_007758AC073846696473243RH361347424.83    1 AC073846
S/G/Y/R/B/O NT_007758AC073846696485353RH618017426.10  7401.901 AC073846
S/G/Y/R/B/O NT_007758AC073846696654913RH783897426.18    1 AC073846, U87315
S/G/Y/R/B/O NT_007758AC073846696664473RH758657426.00    1 AC073846, U87315
S/G/Y/R/B/O NT_007758AC073846696712483RH1036727425.34    1 AC073846
S/G/Y/R/B/O NT_007758AC073846697023673RH1024997426.66    1 AC073846
S/G/Y/R/B/O NT_007758AC093168697352753RH939207427.67    1 AC093168
S/G/Y/R/B/O NT_007758AC093168697987603RH263987424.83    1 AC093168
S/G/Y/R/B/O NT_007758AC093168698318543RH990417424.51    1 AC093168
S/G/Y/R/B/O NT_007758AC099398698826033RH614637425.15  7401.401 AC099398
S/G/Y/R/B/O NT_007758AC005056700356133RH8667  73359.00  1 AC005056, U62292, U63721
S/G/Y/R/B/O NT_007758AC005056700356833RH7918  73478.00  1 AC005056, U62292, U63721
S/G/Y/R/B/O NT_007758AC005056700357813RH33778  73485.00  1 AC005056, U62292, U63721
S/G/Y/R/B/O NT_007758AC005057700878363RH618517428.76  7404.001 AC004956, AC005057, AC016675, U62293, U63721
S/G/Y/R/B/O NT_007758AC005081701621423RH1409  71106.00  2AC073150, AC004956, AC005081, AC016675, AC073150, AF045555
S/G/Y/R/B/O NT_007758AC005081701804413RH613207424.19  7400.901 AC005081, AC016675, AF045555
S/G/Y/R/B/O NT_007758AC005081701949373RH613787424.83  7401.101 AC005081, AC016675, AF045555
S/G/Y/R/B/O NT_007758AC005081701950903RH615337423.65  7401.001 AC005081, AC016675, AF045555
S/G/Y/R/B/O NT_007758AC005081701953093RH101747425.3473369.00  1 AC005081, AC016675, AF045555
S/G/Y/R/B/O NT_007758AC005081701971093RH32384  73496.00  1 AC005081, AC016675, AF045555, AF483622
S/G/Y/R/B/O NT_007758AC005081701971133RH616027424.83  7368.601 AC016675, AF045555, AF483622
S/G/Y/R/B/O NT_007758AC005015704396903RH1042067424.83    1 AC005015
S/G/Y/R/B/O NT_007758AC004851705369543RH14773  73506.00  1 AC004851
S/G/Y/R/B/O NT_007758AC005231705667123RH755957427.28    1 AC005231
S/G/Y/R/B/O NT_007758AC083884706465743RH363077423.65    1 AC004883, AC083884
S/G/Y/R/B/O NT_007758AC083884706466843RH676367424.51    1 AC004883, AC083884
S/G/Y/R/B/O NT_007758AC083884706904133RH407577424.51    1 AC004883, AC005098, AC083884
S/G/Y/R/B/O NT_007758AC083884707229343RH251577425.56    3AC004166, AC006995, AC061712, AC004166, AC004883, AC005080, AC005098, AC006995, AC027219, AC061712, AC083884, AC105418, AC115105
S/G/Y/R/B/O NT_007758AC083884707232663RH806547424.40    3AC004166, AC006995, AC061712, AC004166, AC004883, AC005080, AC005098, AC006995, AC027219, AC061712, AC083884, AC105418, AC115105
S/G/Y/R/B/O NT_007758AC083884707240163RH8557  73380.00  3AC004166, AC006995, AC061712, AC004166, AC004883, AC005080, AC005098, AC006995, AC027219, AC061712, AC083884, AC105418, AC115105
S/G/Y/R/B/O NT_007758AC083884707241243RH617087423.57  7399.203AC004166, AC006995, AC061712, AC004166, AC004883, AC005080, AC005098, AC006995, AC027219, AC061712, AC083884, AC105418, AC115105


  NT_007758 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007758AC083884707241243RH98737424.40    3AC004166, AC006995, AC061712, AC004166, AC004883, AC005080, AC005098, AC006995, AC027219, AC061712, AC083884, AC105418, AC115105
S/G/Y/R/B/O NT_007758AC083884707247043RH616747422.74  7398.403AC004166, AC006995, AC061712, AC004166, AC004883, AC005080, AC005098, AC006995, AC027219, AC061712, AC083884, AC105418, AC115105
S/G/Y/R/B/O NT_007758AC083884707435003RH613217422.74  7398.401AC006995, AC005080, AC005098, AC006995, AC027219, AC083884, AC115105, U60970, U61238, U61242
S/G/Y/R/B/O NT_007758AC004867708485513RH38639  73344.00  5AC004166, AC005049, AC005488, AC006014, AC061712, AC115107, AC004166, AC004867, AC005049, AC005098, AC005488, AC006014, AC061712, AC105418, AC115107, AC115108
S/G/Y/R/B/O NT_007758AC004867708487163RH108357424.40    4AC004166, AC005488, AC006014, AC061712, AC115107, AC004166, AC004867, AC005098, AC005488, AC006014, AC061712, AC105418, AC115107, AC115108
S/G/Y/R/B/O NT_007758AC004867708516393RH619627427.8873527.007391.804AC004166, AC005488, AC006014, AC061712, AC073842, AC115107, AC004166, AC004867, AC005098, AC005488, AC006014, AC061712, AC073842, AC105418, AC115107, AC115108
S/G/Y/R/B/O NT_007758AC004867708861633RH796127428.43    2AC004166, AC005071, AC005073, AC092483, AC004166, AC004867, AC005071, AC005073, AC005098, AC092483
S/G/Y/R/B/O NT_007758AC004166709485923RH676587426.95    3AC006995, AC061712, AC004166, AC005080, AC006995, AC027219, AC061712, AC105418, AC115105
S/G/Y/R/B/O NT_007758 - RH1036597424.51    0  
S/G/Y/R/B/O NT_007758 - RH13858  73341.00  1AC006014, AC006014, AC115106, AC115108
S/G/Y/R/B/O NT_007758 - WI-20883    7399.201AC006014, AC006014, AC115106, AC115108
S/G/Y/R/B/O NT_007758 - RH125857424.51    0  
S/G/Y/R/B/O NT_007758 - RH14973  73355.00  0  
S/G/Y/R/B/O NT_007758 - RH165317423.97    0  
S/G/Y/R/B/O NT_007758 - RH32070  73151.00  1AC011895, AC084057, AC011895, AC084057, AF312032
S/G/Y/R/B/O NT_007758 - RH250577424.51    0  
S/G/Y/R/B/O NT_007758 - RH33392  73162.00  1AC004977, AC004977
S/G/Y/R/B/O NT_007758 - RH270637415.35    0AC083884, AC004883, AC083884
S/G/Y/R/B/O NT_007758 - RH450867426.95    0  
S/G/Y/R/B/O NT_007758 - RH464747425.77    0AC004166, AC004867, AC005488, AC006014, AC061712, AC073842, AC092483, AC115107, AC004166, AC004867, AC005098, AC005488, AC006014, AC061712, AC073842, AC092483, AC105418, AC115107, AC115108
S/G/Y/R/B/O NT_007758 - RH614667425.12  7403.400  
S/G/Y/R/B/O NT_007758 - RH616367423.65  7404.300  
S/G/Y/R/B/O NT_007758 - RH666497403.24    0  
S/G/Y/R/B/O NT_007758 - RH712287426.84    0 More than 15
S/G/Y/R/B/O NT_007758 - RH805257401.97    0  
S/G/Y/R/B/O NT_007758 - RH929877426.00    0  
S/G/Y/R/B/O NT_007758 - RH932067426.07    0