Chromosome 7 - RH Maps - Single Contig

Chromosome 7 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_029998	NT_007968	NT_033967	NT_033174	NT_033965	NT_007819	NT_033177	NT_023530
NT_030008	NT_033968	NT_023629	NT_028235	NT_030001	NT_033184	NT_033969	NT_007758
NT_007834	NT_017168	NT_033966	NT_033176	NT_033964	NT_007930	NT_029999	NT_033180
NT_007912	NT_023632	NT_007933	NT_030012	NT_023649	NT_007688	NT_027067	NT_033179
NT_033181	NT_007914	NT_033182	NT_033175	NT_007666	NT_007905	NT_007741	NT_028233

NT_007968

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_007968	AC099731	332329	3	RH48875	7	12.18					1		AC099731
S/G/Y/R/B/O	NT_007968	AC099731	428544	3	RH9796	7	0.42					1		AC099731
S/G/Y/R/B/O	NT_007968	AC099731	434467	3	RH40752	7	10.27					1		AC099731
S/G/Y/R/B/O	NT_007968	AC099731	487503	3	RH94009	7	10.29					1		AC099731
S/G/Y/R/B/O	NT_007968	AC099731	492264	3	RH40715	7	10.27					1		AC099731
S/G/Y/R/B/O	NT_007968	AC099731	515688	3	RH48864	7	12.18					1		AC099731
S/G/Y/R/B/O	NT_007968	AC099731	523303	3	RH25520	7	12.15					1		AC099731
S/G/Y/R/B/O	NT_007968	AC073957	544851	3	RH25715	7	11.02					1		AC073957
S/G/Y/R/B/O	NT_007968	AC073957	544888	3	RH12698	7	0.42					1		AC073957
S/G/Y/R/B/O	NT_007968	AC073957	546577	3	RH76505	7	10.48					1		AC073957
S/G/Y/R/B/O	NT_007968	AC073957	613521	3	RH14754			7	24.00			1		AC073957
S/G/Y/R/B/O	NT_007968	AC073957	613584	3	RH78402	7	10.27					1		AC073957
S/G/Y/R/B/O	NT_007968	AC073957	671749	3	RH32438			7	63.00			1		AC073957
S/G/Y/R/B/O	NT_007968	AC073957	707503	3	RH33402			7	58.00			1		AC073957
S/G/Y/R/B/O	NT_007968	AC091729	739558	3	RH10069	7	12.69					1		AC091729
S/G/Y/R/B/O	NT_007968	AC091729	739612	3	RH11876	7	12.18					1		AC091729
S/G/Y/R/B/O	NT_007968	AC091729	741511	3	RH70704	7	11.96					1		AC091729
S/G/Y/R/B/O	NT_007968	AC091729	754579	3	RH65680	7	14.45					1		AC091729
S/G/Y/R/B/O	NT_007968	AC073094	826098	3
S/G/Y/R/B/O	NT_007968	AC102953	1083202	3	RH46485	7	15.78					1		AC102953
S/G/Y/R/B/O	NT_007968	AC102953	1118348	3	RH74965	7	16.11					1		AC102953
S/G/Y/R/B/O	NT_007968	AC093734	1191273	3	RH78695	7	16.05					1		AC093734
S/G/Y/R/B/O	NT_007968	AC093734	1191315	3	RH26298	7	16.94					1		AC093734
S/G/Y/R/B/O	NT_007968	AC093734	1210529	3	RH104277	7	16.05					1
S/G/Y/R/B/O	NT_007968	AC093734	1215896	3	RH48827	7	15.39					1		AC093734
S/G/Y/R/B/O	NT_007968	AC093734	1237884	3	RH16025	7	15.39					1		AC093734
S/G/Y/R/B/O	NT_007968	AC074389	1358391	3	RH91931	7	15.39					1		AC074389
S/G/Y/R/B/O	NT_007968	AC074389	1387114	3	RH48889	7	16.05					1		AC074389
S/G/Y/R/B/O	NT_007968	AC110781	1464257	3	RH71224	7	17.72					1	AP000344,	AC110781, AP000344
S/G/Y/R/B/O	NT_007968	AC104129	1491765	3	RH61950	7	17.06					1	AC110781,	AC104129, AC110781
S/G/Y/R/B/O	NT_007968	AC104129	1491765	3	NIB499					7	30.60	1	AC110781,	AC104129, AC110781
S/G/Y/R/B/O	NT_007968	AC069288	1556062	3
S/G/Y/R/B/O	NT_007968		-		RH102001	7	14.23					0	AC073957,	AC073957
S/G/Y/R/B/O	NT_007968		-		RH103959	7	14.45					0
S/G/Y/R/B/O	NT_007968		-		RH16242	7	14.23					0
S/G/Y/R/B/O	NT_007968		-		RH36865	7	13.46					0
S/G/Y/R/B/O	NT_007968		-		RH40711	7	10.29					0
S/G/Y/R/B/O	NT_007968		-		RH61337	7	12.59					0