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  Chromosome 7 - RH Maps - Single Contig
 

Chromosome 7 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_029998 NT_007968 NT_033967 NT_033174 NT_033965 NT_007819 NT_033177 NT_023530
NT_030008 NT_033968 NT_023629 NT_028235 NT_030001 NT_033184 NT_033969 NT_007758
NT_007834 NT_017168 NT_033966 NT_033176 NT_033964 NT_007930 NT_029999 NT_033180
NT_007912 NT_023632 NT_007933 NT_030012 NT_023649 NT_007688 NT_027067 NT_033179
NT_033181 NT_007914 NT_033182 NT_033175 NT_007666 NT_007905 NT_007741 NT_028233


  NT_033968
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033968AC018705506526433RH1035687229.31    1 AC018705
S/G/Y/R/B/O NT_033968AC018705506530733RH688117231.21    1 AC018705
S/G/Y/R/B/O NT_033968AC018705506994943RH617537227.92  7184.201 AC018705
S/G/Y/R/B/O NT_033968AC080092507984923RH118587229.72    1 AC080092
S/G/Y/R/B/O NT_033968AC080092508009233RH618257229.31  7183.501 AC080092
S/G/Y/R/B/O NT_033968AC080092508009233RH615017229.72  7185.401 AC080092
S/G/Y/R/B/O NT_033968AC005153508217643          
S/G/Y/R/B/O NT_033968AC007089509439553          
S/G/Y/R/B/O NT_033968AC004920510009283RH254197234.10    1 AC004920
S/G/Y/R/B/O NT_033968AC004920510112503WI-3814    7187.501 AC004920
S/G/Y/R/B/O NT_033968AC009296510634003WI-9784    7189.401 AC009296
S/G/Y/R/B/O NT_033968AC004830510851513          
S/G/Y/R/B/O NT_033968AC004414512247423RH33662  72261.00  1 AC004414
S/G/Y/R/B/O NT_033968AC004414512254033RH697557232.88    1 AC004414
S/G/Y/R/B/O NT_033968AC004414512310203RH664577236.42    1 AC004414
S/G/Y/R/B/O NT_033968AC004414512786743RH426587233.3872252.00  1 AC004414
S/G/Y/R/B/O NT_033968AC004414512804473RH923837236.02    1 AC004414
S/G/Y/R/B/O NT_033968AC012372512834713          
S/G/Y/R/B/O NT_033968AC005535513748443          
S/G/Y/R/B/O NT_033968AC012441515366673D7S1775    7191.701 AC012441
S/G/Y/R/B/O NT_033968AC073193516255403WI-967    7211.701 AC073193, AC093385
S/G/Y/R/B/O NT_033968AC092441517226773          
S/G/Y/R/B/O NT_033968AC005999518952933CHLC.GATA4E06    7191.601 AC005999
S/G/Y/R/B/O NT_033968AC005999518954873CHLC.GATA4E04    7191.601 AC005999
S/G/Y/R/B/O NT_033968AC018701519046253          
S/G/Y/R/B/O NT_033968AC006478519353273RH407347234.19    1 AC006478
S/G/Y/R/B/O NT_033968AC006478520104983RH427117236.1272257.00  1 AC006478, AC073307
S/G/Y/R/B/O NT_033968AC022458520929673          
S/G/Y/R/B/O NT_033968AC009415521121833          
S/G/Y/R/B/O NT_033968AC082648522923303          
S/G/Y/R/B/O NT_033968AC079763523426153          
S/G/Y/R/B/O NT_033968AC006320524500703          
S/G/Y/R/B/O NT_033968AC006459525428633          
S/G/Y/R/B/O NT_033968AC011283527296443          
S/G/Y/R/B/O NT_033968AC091650527977703          
S/G/Y/R/B/O NT_033968AC074263528415893          
S/G/Y/R/B/O NT_033968AC010125529685783AFM196XD2    7196.601 AC010125
S/G/Y/R/B/O NT_033968AC010125530252023RH133467240.41    1 AC010125
S/G/Y/R/B/O NT_033968AC092105530764263          
S/G/Y/R/B/O NT_033968AC074397531460283          
S/G/Y/R/B/O NT_033968AC073318532586043          
S/G/Y/R/B/O NT_033968AC092208534208643          
S/G/Y/R/B/O NT_033968AC007735535547763          
S/G/Y/R/B/O NT_033968AC092462536689963          
S/G/Y/R/B/O NT_033968AC009468536873453RH928727242.53    1 AC009468
S/G/Y/R/B/O NT_033968AC009468537145373RH181257246.28    2AC025690, AC105911, AC009468, AC025690, AC105911
S/G/Y/R/B/O NT_033968AC007964538224553          
S/G/Y/R/B/O NT_033968AC074348539769613          
S/G/Y/R/B/O NT_033968AC093715541342723          
S/G/Y/R/B/O NT_033968AC073521541362663          


  NT_033968 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033968AC073125542159603          
S/G/Y/R/B/O NT_033968AC092848544027643          
S/G/Y/R/B/O NT_033968AC096658544675403          
S/G/Y/R/B/O NT_033968AC073269545426823          
S/G/Y/R/B/O NT_033968AC069313547582613RH615097249.98  7222.601 AC012335, AC069313
S/G/Y/R/B/O NT_033968AC069313547783253RH613187249.98  7223.801 AC069313
S/G/Y/R/B/O NT_033968AC069313547785163RH473597249.98    1 AC069313
S/G/Y/R/B/O NT_033968AC011228547790023RH616567250.19  7222.101 AC011228
S/G/Y/R/B/O NT_033968AC011228548891133RH426337253.5772442.00  1AC019210, AC011228, AC019210
S/G/Y/R/B/O NT_033968AC019210549426323          
S/G/Y/R/B/O NT_033968AC074351549577583          
S/G/Y/R/B/O NT_033968AC092449550268523          
S/G/Y/R/B/O NT_033968AC006971551044213          
S/G/Y/R/B/O NT_033968AC006977552264823RH708137255.07    1 AC006977, AF288738, M38425
S/G/Y/R/B/O NT_033968AC006977552632933WI-4253    7221.701 AC006977, AF288738
S/G/Y/R/B/O NT_033968AC006977552653263RH460707253.67    1 AC006977, AF288738
S/G/Y/R/B/O NT_033968AC006977552656143RH175197253.67    1 AC006977, AF288738
S/G/Y/R/B/O NT_033968AC006977553657223RH712347256.54    1 AC006977, AF288738
S/G/Y/R/B/O NT_033968AC073324553984143RH615617256.08  7216.501 AC073324, AF288738
S/G/Y/R/B/O NT_033968AC073324553984143RH32470  76349.00  1 AC073324, AF288738
S/G/Y/R/B/O NT_033968AC073324554138033RH124207252.16    1 AC073324, AF288738
S/G/Y/R/B/O NT_033968AC073324554152433RH617587256.90  7217.501 AC073324, AF288738
S/G/Y/R/B/O NT_033968AC073324554193403RH992697256.49    1 AC073324
S/G/Y/R/B/O NT_033968AC073347556035013RH614557250.82  7224.601 AC073347
S/G/Y/R/B/O NT_033968AC073347556394483RH797157257.79    1 AC073347
S/G/Y/R/B/O NT_033968AC073347556404493RH614527257.72  7225.401 AC073347
S/G/Y/R/B/O NT_033968AC073347556404973RH613347257.7272462.007229.101 AC073347
S/G/Y/R/B/O NT_033968AC073347556416013RH103227261.9772469.00  1 AC073347
S/G/Y/R/B/O NT_033968AC073347556416813RH128817256.75    1 AC073347
S/G/Y/R/B/O NT_033968AC073347556788023RH8700  77175.00  1 AC073347
S/G/Y/R/B/O NT_033968AC073347556862223RH748467259.53    1 AC073347
S/G/Y/R/B/O NT_033968AC073237557479073D7S499    7220.501 AC073237
S/G/Y/R/B/O NT_033968AC073237557479733RH133267259.6372495.00  1 AC073237
S/G/Y/R/B/O NT_033968AC073237557686253RH14756  72484.00  1 AC073237
S/G/Y/R/B/O NT_033968AC099681557721683          
S/G/Y/R/B/O NT_033968AC091812558892903RH616467247.99  7229.202AC083863, AC083863, AC091812, AC093385
S/G/Y/R/B/O NT_033968AC091812558893513RH259177263.07    2AC083863, AC083863, AC091812, AC093385
S/G/Y/R/B/O NT_033968AC091812558904533RH262487263.07    2AC083863, AC083863, AC091812, AC093385
S/G/Y/R/B/O NT_033968AC091812559011543RH485467263.07    2AC083863, AC083863, AC091812, AC093385
S/G/Y/R/B/O NT_033968AC092647559889193          
S/G/Y/R/B/O NT_033968AC092579561639333RH673567264.76    1 AC092579
S/G/Y/R/B/O NT_033968AC092579562072963RH616197264.86  7230.301 AC092579
S/G/Y/R/B/O NT_033968AC092579562073273RH14327  72507.00  1 AC092579
S/G/Y/R/B/O NT_033968AC092579562079813RH8676  72501.00  1 AC092579
S/G/Y/R/B/O NT_033968AC092579562080943RH102777265.35    1 AC092579
S/G/Y/R/B/O NT_033968AC092579562081243RH661757264.65    1 AC092579
S/G/Y/R/B/O NT_033968AC092579562192403RH681967262.26    1 AC092579
S/G/Y/R/B/O NT_033968AC092579562193323RH250507264.76    1 AC092579
S/G/Y/R/B/O NT_033968AC092101562712703RH615327265.72  7229.501 AC092101
S/G/Y/R/B/O NT_033968AC092101562718563RH613727266.15  7228.001 AC092101


  NT_033968 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033968AC092101562718563RH14768  77242.00  1 AC092101
S/G/Y/R/B/O NT_033968AC092101562725633RH653707264.72    1 AC092101
S/G/Y/R/B/O NT_033968AC092101562878333RH651547264.72    1 AC074103, AC092101
S/G/Y/R/B/O NT_033968AC006970563098623RH1030907264.55    1 AC006970
S/G/Y/R/B/O NT_033968AC073136564387503          
S/G/Y/R/B/O NT_033968AC093392565193463          
S/G/Y/R/B/O NT_033968AC092423566169433          
S/G/Y/R/B/O NT_033968AC092447567093603RH585843600.65  3736.302AC108738, AL354720, AC108738, AL354720
S/G/Y/R/B/O NT_033968AC092447568095003RH18504794.66    3AC005082, AP002376, AC005082, AC024199, AP002376
S/G/Y/R/B/O NT_033968AC095038568144253          
S/G/Y/R/B/O NT_033968AC093636569600421          
S/G/Y/R/B/O NT_033968 - RH109167225.25    1AL139244, AC004962, AL139244
S/G/Y/R/B/O NT_033968 - RH177377229.31    0  
S/G/Y/R/B/O NT_033968 - RH495047253.8772458.00  0  
S/G/Y/R/B/O NT_033968 - RH33756  72259.00  0  
S/G/Y/R/B/O NT_033968 - RH38614  72347.00  1 AL158079
S/G/Y/R/B/O NT_033968 - RH8558  72629.00  1AC093376, AC093376
S/G/Y/R/B/O NT_033968 - RH616187229.31  7183.500  
S/G/Y/R/B/O NT_033968 - RH649667229.31    0  
S/G/Y/R/B/O NT_033968 - RH650567230.56    0  
S/G/Y/R/B/O NT_033968 - RH652057229.31    0  
S/G/Y/R/B/O NT_033968 - RH669867240.31    0AL132765, AL132765
S/G/Y/R/B/O NT_033968 - RH937837264.76    0  
S/G/Y/R/B/O NT_033968 - RH942467255.07    0AC006977, AC006977, AF288738