Chromosome 1 - RH Maps - Single Contig

Chromosome 1 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_032954	NT_004350	NT_022058	NT_004321	NT_004547	NT_021917	NT_028054	NT_032970
NT_032967	NT_021937	NT_004488	NT_022041	NT_004873	NT_030584	NT_004572	NT_029218
NT_004610	NT_032979	NT_004391	NT_030571	NT_004782	NT_028053	NT_004538	NT_004511
NT_004852	NT_032963	NT_032971	NT_032972	NT_031724	NT_004386	NT_032978	NT_032977
NT_004424	NT_032976	NT_032965	NT_032973	NT_031689	NT_029223	NT_004641	NT_029865
NT_031737	NT_004636	NT_032948	NT_004464	NT_032953	NT_004483	NT_004302	NT_032960
NT_032956	NT_032974	NT_004902	NT_026943	NT_029231	NT_004658	NT_004686	NT_021979
NT_030565	NT_028050	NT_004308	NT_004623	NT_030567	NT_032957	NT_021977	NT_029860
NT_019273	NT_031697	NT_004754	NT_032961	NT_032975	NT_022052	NT_022071	NT_004434
NT_032962	NT_021907	NT_004441	NT_030577	NT_004858	NT_019291	NT_031708	NT_029226
NT_026945	NT_004982	NT_032952	NT_004668	NT_029874	NT_004487	NT_032958	NT_004599
NT_031716	NT_004671	NT_021909	NT_004416	NT_029862	NT_021905	NT_032947	NT_021877
NT_004612	NT_031718	NT_032950	NT_004525	NT_032955	NT_029863	NT_032951	NT_021953
NT_004861	NT_031696	NT_004908	NT_004559	NT_031728	NT_021973	NT_004753	NT_004433
NT_030561	NT_004836	NT_031685	NT_004771	NT_004734	NT_031700	NT_031719	NT_004536
NT_032964	NT_031732	NT_032966	NT_031730	NT_029870	NT_032969	NT_032968

NT_032973

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_032973	AC036239	54300970	1
S/G/Y/R/B/O	NT_032973	AL359743	54330105	1
S/G/Y/R/B/O	NT_032973	AL590093	54377522	3	RH67162	1	153.85					1	AC036239,	AC011736, AC036239, AL590093
S/G/Y/R/B/O	NT_032973	AL590093	54393945	3	RH48241	1	154.95					1	AC036239,	AC011736, AC036239, AL590093
S/G/Y/R/B/O	NT_032973	AL139244	54519046	3	RH10916	7	225.25					1		AC004962, AL139244
S/G/Y/R/B/O	NT_032973	AL139244	54534056	3	RH50060	1	153.75			1	174.80	1		AC004962, AL139244
S/G/Y/R/B/O	NT_032973	AL139244	54556867	3	RH48130	1	153.75					1		AC004962, AL139244
S/G/Y/R/B/O	NT_032973	AC096536	54625177	3	D1S417					1	175.80	1		AC009946
S/G/Y/R/B/O	NT_032973	AC096536	54625177	3	RH13488	1	154.95	1	2688.00			1		AC009946
S/G/Y/R/B/O	NT_032973	AC096536	54626793	3	RH25257	1	154.95					1		AC009946, AC096536
S/G/Y/R/B/O	NT_032973	AC096536	54627058	3	RH68204	1	153.73					1		AC009946, AC096536
S/G/Y/R/B/O	NT_032973	AL590440	54769063	3	RH93772	1	153.85					1	AL592210,	AC009946, AL592210
S/G/Y/R/B/O	NT_032973	AL589790	54779283	3
S/G/Y/R/B/O	NT_032973	AC091609	54841729	1	RH18483	1	153.75					2	AL592210,	AC091609, AL158848, AL592210
S/G/Y/R/B/O	NT_032973	AC091609	54841766	1	RH65068	1	153.85					2	AL592210,	AC091609, AL158848, AL592210
S/G/Y/R/B/O	NT_032973	AC091609	54843521	1	RH63905	1	154.95			1	174.80	2	AL592210,	AC091609, AL158848, AL592210
S/G/Y/R/B/O	NT_032973	AC091609	54843634	1	RH10520	1	153.75					2	AL592210,	AC091609, AL158848, AL592210
S/G/Y/R/B/O	NT_032973	AC091609	54845298	1	RH12726	1	153.85					2	AL592210,	AC091609, AL158848, AL592210
S/G/Y/R/B/O	NT_032973	AC091609	54848536	1	RH64252	1	154.95			1	177.60	2	AL592210,	AC091609, AL158848, AL592210
S/G/Y/R/B/O	NT_032973	AC091609	54866305	1	RH78724	1	153.85					2	AL592210,	AC091609, AL158848, AL592210
S/G/Y/R/B/O	NT_032973	AC091609	54947374	1	WI-9848					1	174.80	2	AL592210,	AC091609, AL390861, AL592210
S/G/Y/R/B/O	NT_032973	AL672061	55013914	3	WI-4040					1	174.80	1		AC026036, AL672061
S/G/Y/R/B/O	NT_032973	AL049710	55098502	3	WI-10473					1	175.80	1		AC026036, AL049710, AL391823
S/G/Y/R/B/O	NT_032973	AL049710	55195966	3	RH29950			1	2720.00			1		AL049710
S/G/Y/R/B/O	NT_032973	AL645698	55216854	3
S/G/Y/R/B/O	NT_032973	AL109742	55321603	3	D1S200					1	175.80	1		AL109742
S/G/Y/R/B/O	NT_032973	AL109742	55321603	3	RH767			1	2705.00			1		AL109742
S/G/Y/R/B/O	NT_032973	AL645699	55329330	3
S/G/Y/R/B/O	NT_032973	AC026289	55367511	1
S/G/Y/R/B/O	NT_032973	AL603840	55502595	3	WI-4611					1	174.30	2	AC055886,	AC055885, AC055886, AL157949, AL603840
S/G/Y/R/B/O	NT_032973	AL512822	55549875	3
S/G/Y/R/B/O	NT_032973	AL606827	55609850	3	RH98427	1	153.63					1		AL606827
S/G/Y/R/B/O	NT_032973	AL606827	55616731	3	RH70442	1	153.45					1		AL606827
S/G/Y/R/B/O	NT_032973	AC006500	55748426	3	RH45670	1	154.95					1		AC006500, AL139145
S/G/Y/R/B/O	NT_032973	AL357041	55883569	3
S/G/Y/R/B/O	NT_032973	AL353681	56005214	3	RH49347	1	156.48	1	2738.00			1	AC073467, AL359743,	AC073467, AL359743
S/G/Y/R/B/O	NT_032973	AC073467	56021759	1
S/G/Y/R/B/O	NT_032973	AL591592	56053045	3
S/G/Y/R/B/O	NT_032973		-		RH50489	1	156.48					0		AL354883
S/G/Y/R/B/O	NT_032973		-		RH78711	1	156.48					0