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  Chromosome 1 - RH Maps - Single Contig
 

Chromosome 1 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_032954 NT_004350 NT_022058 NT_004321 NT_004547 NT_021917 NT_028054 NT_032970
NT_032967 NT_021937 NT_004488 NT_022041 NT_004873 NT_030584 NT_004572 NT_029218
NT_004610 NT_032979 NT_004391 NT_030571 NT_004782 NT_028053 NT_004538 NT_004511
NT_004852 NT_032963 NT_032971 NT_032972 NT_031724 NT_004386 NT_032978 NT_032977
NT_004424 NT_032976 NT_032965 NT_032973 NT_031689 NT_029223 NT_004641 NT_029865
NT_031737 NT_004636 NT_032948 NT_004464 NT_032953 NT_004483 NT_004302 NT_032960
NT_032956 NT_032974 NT_004902 NT_026943 NT_029231 NT_004658 NT_004686 NT_021979
NT_030565 NT_028050 NT_004308 NT_004623 NT_030567 NT_032957 NT_021977 NT_029860
NT_019273 NT_031697 NT_004754 NT_032961 NT_032975 NT_022052 NT_022071 NT_004434
NT_032962 NT_021907 NT_004441 NT_030577 NT_004858 NT_019291 NT_031708 NT_029226
NT_026945 NT_004982 NT_032952 NT_004668 NT_029874 NT_004487 NT_032958 NT_004599
NT_031716 NT_004671 NT_021909 NT_004416 NT_029862 NT_021905 NT_032947 NT_021877
NT_004612 NT_031718 NT_032950 NT_004525 NT_032955 NT_029863 NT_032951 NT_021953
NT_004861 NT_031696 NT_004908 NT_004559 NT_031728 NT_021973 NT_004753 NT_004433
NT_030561 NT_004836 NT_031685 NT_004771 NT_004734 NT_031700 NT_031719 NT_004536
NT_032964 NT_031732 NT_032966 NT_031730 NT_029870 NT_032969 NT_032968


  NT_031689
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_031689AL354885561555651          
S/G/Y/R/B/O NT_031689AC099562562405711CHLC.GATA7A05.219    1180.501 AC099562
S/G/Y/R/B/O NT_031689AC099562562497351RH917981156.58    1 AC099562
S/G/Y/R/B/O NT_031689AC099562562508731RH33406  12767.00  1 AC099562
S/G/Y/R/B/O NT_031689AC099562562510901RH251081156.99    1 AC099562
S/G/Y/R/B/O NT_031689AC099562562924521WI-4323    1178.201 AC099562, AL390015
S/G/Y/R/B/O NT_031689AC099562563050461WI-4109    1174.801 AC099562
S/G/Y/R/B/O NT_031689AC099562563313981RH502921156.99  1177.701AC099789, AC099562, AC099789
S/G/Y/R/B/O NT_031689AC099562563339781RH166621153.53    1AC099789, AC099562, AC099789
S/G/Y/R/B/O NT_031689AC099789564014801WI-5716    1177.801 AC099789
S/G/Y/R/B/O NT_031689AL035705564626433RH644651156.5812767.001177.701AC099789, AC099789, AL035705
S/G/Y/R/B/O NT_031689AL035705564685533RH98121153.53    1AC099789, AC099789, AL035705
S/G/Y/R/B/O NT_031689AL035705564693463RH756701156.99    1AC099789, AC099789, AL035705
S/G/Y/R/B/O NT_031689AL035705564698393RH646791156.48    1AC099789, AC099789, AL035705
S/G/Y/R/B/O NT_031689AL360295565390103          
S/G/Y/R/B/O NT_031689AL121998566298273RH647751156.99    1 AL121998, AL365177
S/G/Y/R/B/O NT_031689AL121998566726493RH8299  12767.00  1 AL121998, AL365177
S/G/Y/R/B/O NT_031689AL121998566726493RH503601153.45  1174.801 AL121998, AL365177
S/G/Y/R/B/O NT_031689AL121998566727793RH176691156.99    1 AL121998, AL365177
S/G/Y/R/B/O NT_031689AL121998566741753RH33522  12767.00  1 AL121998, AL365177
S/G/Y/R/B/O NT_031689AL121998566867113RH362841153.53    1 AL121998, AL365177
S/G/Y/R/B/O NT_031689AL121998566910173RH697761156.99    1 AL121998
S/G/Y/R/B/O NT_031689AL121998567039513RH504581156.99  1177.801 AL121998, AL365177
S/G/Y/R/B/O NT_031689AL121998567124993RH761521156.99    1 AL121998
S/G/Y/R/B/O NT_031689AL161740567211713          
S/G/Y/R/B/O NT_031689 - RH1045481156.99    0  
S/G/Y/R/B/O NT_031689 - RH31570  12755.00  0 AL138779, AL157907, AL354883
S/G/Y/R/B/O NT_031689 - RH163351156.99    0 AL354883
S/G/Y/R/B/O NT_031689 - RH251921156.99    0 AL354883, AL354883
S/G/Y/R/B/O NT_031689 - RH359471156.58    1AC092784, AC092784, AL356112
S/G/Y/R/B/O NT_031689 - RH445791156.58    0  
S/G/Y/R/B/O NT_031689 - RH638491156.99    0 AL354883, AL354883
S/G/Y/R/B/O NT_031689 - RH797171156.99    0 AL138779, AL157907, AL354883
S/G/Y/R/B/O NT_031689 - RH33496  12751.001179.700 AL354883